RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 CFDP1Q9UEE9 299 aaPredicted RBP17.94■□□□□ 0.46
CLIP4-203ENST00000401617 UHRF1BP1LA0JNW5 1464 aa17.93■□□□□ 0.46
CLIP4-203ENST00000401617 CHIC2Q9UKJ5 165 aa17.92■□□□□ 0.46
CLIP4-203ENST00000401617 RRP7BPQ9NSQ0 103 aa17.91■□□□□ 0.46
CLIP4-203ENST00000401617 CROCC2H7BZ55 1655 aa17.91■□□□□ 0.46
CLIP4-203ENST00000401617 KDM6BO15054 1643 aa17.91■□□□□ 0.46
CLIP4-203ENST00000401617 TIMELESSQ9UNS1 1208 aa17.9■□□□□ 0.46
CLIP4-203ENST00000401617 ADGBQ8N7X0 1667 aa17.89■□□□□ 0.45
CLIP4-203ENST00000401617 ACIN1Q9UKV3 1341 aaKnown RBP17.89■□□□□ 0.45
CLIP4-203ENST00000401617 ADGRL2O95490 1459 aa17.88■□□□□ 0.45
CLIP4-203ENST00000401617 DIEXFQ68CQ4 756 aaKnown RBP17.87■□□□□ 0.45
CLIP4-203ENST00000401617 PREX2Q70Z35 1606 aa17.86■□□□□ 0.45
CLIP4-203ENST00000401617 CDC42BPBQ9Y5S2 1711 aa17.86■□□□□ 0.45
CLIP4-203ENST00000401617 KDM5BQ9UGL1 1544 aa17.86■□□□□ 0.45
CLIP4-203ENST00000401617 SIN3AQ96ST3 1273 aa17.86■□□□□ 0.45
CLIP4-203ENST00000401617 ZCCHC11Q5TAX3 1644 aaKnown RBP17.85■□□□□ 0.45
CLIP4-203ENST00000401617 NCOA1Q15788 1441 aa17.84■□□□□ 0.45
CLIP4-203ENST00000401617 DENND4BO75064 1496 aaPredicted RBP17.84■□□□□ 0.45
CLIP4-203ENST00000401617 SHANK2Q9UPX8 1470 aa17.83■□□□□ 0.45
CLIP4-203ENST00000401617 ARHGEF5Q12774 1597 aa17.83■□□□□ 0.44
CLIP4-203ENST00000401617 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.82■□□□□ 0.44
CLIP4-203ENST00000401617 TTC37Q6PGP7 1564 aa17.81■□□□□ 0.44
CLIP4-203ENST00000401617 ZNF777Q9ULD5 760 aaPredicted RBP17.8■□□□□ 0.44
CLIP4-203ENST00000401617 SAMD9LQ8IVG5 1584 aa17.8■□□□□ 0.44
CLIP4-203ENST00000401617 MBD5Q9P267 1494 aa17.79■□□□□ 0.44
CLIP4-203ENST00000401617 NEUROD1Q13562 356 aa17.78■□□□□ 0.44
CLIP4-203ENST00000401617 MYO5CQ9NQX4 1742 aa17.78■□□□□ 0.44
CLIP4-203ENST00000401617 ANKRD30AQ9BXX3 1397 aa17.77■□□□□ 0.44
CLIP4-203ENST00000401617 MPHOSPH9Q99550 1183 aa17.76■□□□□ 0.43
CLIP4-203ENST00000401617 TRIM52Q96A61 297 aa17.75■□□□□ 0.43
CLIP4-203ENST00000401617 C9orf84Q5VXU9 1444 aa17.75■□□□□ 0.43
CLIP4-203ENST00000401617 PPP1R15AO75807 674 aaPredicted RBP17.74■□□□□ 0.43
CLIP4-203ENST00000401617 OSCARQ8IYS5 282 aa17.74■□□□□ 0.43
CLIP4-203ENST00000401617 RSPH4AQ5TD94 716 aa17.73■□□□□ 0.43
CLIP4-203ENST00000401617 CCDC141Q6ZP82 1450 aa17.72■□□□□ 0.43
CLIP4-203ENST00000401617 ARHGAP5Q13017 1502 aa17.71■□□□□ 0.43
CLIP4-203ENST00000401617 KIAA1107Q9UPP5 1409 aa17.71■□□□□ 0.43
CLIP4-203ENST00000401617 MAST1Q9Y2H9 1570 aa17.71■□□□□ 0.42
CLIP4-203ENST00000401617 HNRNPMP52272 730 aaKnown RBP eCLIP17.7■□□□□ 0.42
CLIP4-203ENST00000401617 PLCH2O75038 1416 aa17.7■□□□□ 0.42
CLIP4-203ENST00000401617 PZPP20742 1482 aa17.7■□□□□ 0.42
CLIP4-203ENST00000401617 PLEKHH2Q8IVE3 1493 aa17.7■□□□□ 0.42
CLIP4-203ENST00000401617 ANKRD50Q9ULJ7 1429 aa17.7■□□□□ 0.42
CLIP4-203ENST00000401617 TONSLQ96HA7 1378 aa17.69■□□□□ 0.42
CLIP4-203ENST00000401617 TSPY4P0CV99 314 aa17.69■□□□□ 0.42
CLIP4-203ENST00000401617 TSPY10P0CW01 314 aa17.69■□□□□ 0.42
CLIP4-203ENST00000401617 ARAP3Q8WWN8 1544 aa17.68■□□□□ 0.42
CLIP4-203ENST00000401617 SYCP2Q9BX26 1530 aa17.68■□□□□ 0.42
CLIP4-203ENST00000401617 ANKRD30BQ9BXX2 1392 aa17.68■□□□□ 0.42
CLIP4-203ENST00000401617 KCNH8Q96L42 1107 aa17.66■□□□□ 0.42
CLIP4-203ENST00000401617 WDR7Q9Y4E6 1490 aa17.65■□□□□ 0.42
CLIP4-203ENST00000401617 KDM5DQ9BY66 1539 aa17.65■□□□□ 0.42
CLIP4-203ENST00000401617 KIF15Q9NS87 1388 aa17.64■□□□□ 0.41
CLIP4-203ENST00000401617 ARHGEF12Q9NZN5 1544 aa17.63■□□□□ 0.41
CLIP4-203ENST00000401617 SLC4A1APQ9BWU0 796 aaKnown RBP17.63■□□□□ 0.41
CLIP4-203ENST00000401617 PLXNC1O60486 1568 aa17.62■□□□□ 0.41
CLIP4-203ENST00000401617 RPRD2Q5VT52 1461 aaKnown RBP17.62■□□□□ 0.41
CLIP4-203ENST00000401617 ABCC1P33527 1531 aa17.61■□□□□ 0.41
CLIP4-203ENST00000401617 ABCA9Q8IUA7 1624 aa17.61■□□□□ 0.41
CLIP4-203ENST00000401617 EFCAB2Q5VUJ9 269 aa17.61■□□□□ 0.41
CLIP4-203ENST00000401617 FOXD1Q16676 465 aa17.59■□□□□ 0.41
CLIP4-203ENST00000401617 ASXL2Q76L83 1435 aa17.57■□□□□ 0.4
CLIP4-203ENST00000401617 MIER1Q8N108 512 aa17.55■□□□□ 0.4
CLIP4-203ENST00000401617 TEX14Q8IWB6 1497 aa17.55■□□□□ 0.4
CLIP4-203ENST00000401617 NUP155O75694 1391 aa17.55■□□□□ 0.4
CLIP4-203ENST00000401617 UNC13BO14795 1591 aa17.54■□□□□ 0.4
CLIP4-203ENST00000401617 TRAPPC8Q9Y2L5 1435 aa17.53■□□□□ 0.4
CLIP4-203ENST00000401617 PKD2Q13563 968 aa17.53■□□□□ 0.4
CLIP4-203ENST00000401617 DUOX2Q9NRD8 1548 aa17.53■□□□□ 0.4
CLIP4-203ENST00000401617 L3MBTL2Q969R5 705 aa17.52■□□□□ 0.4
CLIP4-203ENST00000401617 RTEL1-TNFRSF6BF6WH68 1400 aa17.51■□□□□ 0.39
CLIP4-203ENST00000401617 ERBINQ96RT1 1412 aa17.49■□□□□ 0.39
CLIP4-203ENST00000401617 FANCAO15360 1455 aa17.49■□□□□ 0.39
CLIP4-203ENST00000401617 FAM135AQ9P2D6 1515 aa17.49■□□□□ 0.39
CLIP4-203ENST00000401617 MAGI2Q86UL8 1455 aa17.48■□□□□ 0.39
CLIP4-203ENST00000401617 NPM1P06748 294 aaKnown RBP eCLIP17.47■□□□□ 0.39
CLIP4-203ENST00000401617 IQGAP3Q86VI3 1631 aa17.47■□□□□ 0.39
CLIP4-203ENST00000401617 ZFYVE16Q7Z3T8 1539 aa17.46■□□□□ 0.39
CLIP4-203ENST00000401617 INO80Q9ULG1 1556 aaPredicted RBP17.44■□□□□ 0.38
CLIP4-203ENST00000401617 SPAG9O60271 1321 aaKnown RBP17.43■□□□□ 0.38
CLIP4-203ENST00000401617 AFAP1Q8N556 730 aa17.42■□□□□ 0.38
CLIP4-203ENST00000401617 ADGRL1O94910 1474 aa17.42■□□□□ 0.38
CLIP4-203ENST00000401617 NBPF8Q3BBV2 869 aa17.41■□□□□ 0.38
CLIP4-203ENST00000401617 ATP7AQ04656 1500 aa17.4■□□□□ 0.38
CLIP4-203ENST00000401617 SCAPERQ9BY12 1400 aa17.4■□□□□ 0.38
CLIP4-203ENST00000401617 CFAP74Q9C0B2 1584 aa17.4■□□□□ 0.38
CLIP4-203ENST00000401617 DEPDC5O75140 1603 aa17.38■□□□□ 0.37
CLIP4-203ENST00000401617 HIRIP3Q9BW71 556 aaPredicted RBP17.38■□□□□ 0.37
CLIP4-203ENST00000401617 UHRF1BP1Q6BDS2 1440 aa17.37■□□□□ 0.37
CLIP4-203ENST00000401617 CD109Q6YHK3 1445 aa17.37■□□□□ 0.37
CLIP4-203ENST00000401617 ATP10AO60312 1499 aa17.37■□□□□ 0.37
CLIP4-203ENST00000401617 PLA2R1Q13018 1463 aa17.37■□□□□ 0.37
CLIP4-203ENST00000401617 HSPA5P11021 654 aaKnown RBP17.36■□□□□ 0.37
CLIP4-203ENST00000401617 EIF4G2P78344 907 aaKnown RBP eCLIP17.35■□□□□ 0.37
CLIP4-203ENST00000401617 DDX10Q13206 875 aaKnown RBP17.35■□□□□ 0.37
CLIP4-203ENST00000401617 RIMBP3CA6NJZ7 1639 aa17.35■□□□□ 0.37
CLIP4-203ENST00000401617 RIMBP3BA6NNM3 1639 aa17.35■□□□□ 0.37
CLIP4-203ENST00000401617 RIMBP3Q9UFD9 1639 aa17.35■□□□□ 0.37
CLIP4-203ENST00000401617 KIDINS220Q9ULH0 1771 aa17.34■□□□□ 0.37
CLIP4-203ENST00000401617 SPATA31E1Q6ZUB1 1445 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms