RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 TDRD9Q8NDG6 1382 aaKnown RBP17.65■□□□□ 0.42
RERE-204ENST00000400908 PTMSP20962 102 aa17.64■□□□□ 0.42
RERE-204ENST00000400908 GOLGA2Q08379 1002 aa17.64■□□□□ 0.42
RERE-204ENST00000400908 SUPT16HQ9Y5B9 1047 aaKnown RBP17.64■□□□□ 0.41
RERE-204ENST00000400908 NPHP1O15259 732 aa17.64■□□□□ 0.41
RERE-204ENST00000400908 SIN3AQ96ST3 1273 aa17.63■□□□□ 0.41
RERE-204ENST00000400908 GNL2Q13823 731 aaKnown RBP17.63■□□□□ 0.41
RERE-204ENST00000400908 MS4A1P11836 297 aa17.62■□□□□ 0.41
RERE-204ENST00000400908 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.62■□□□□ 0.41
RERE-204ENST00000400908 HAP1P54257 671 aaPredicted RBP17.6■□□□□ 0.41
RERE-204ENST00000400908 RUSC2Q8N2Y8 1516 aa17.6■□□□□ 0.41
RERE-204ENST00000400908 MAPK8IP3Q9UPT6 1336 aa17.6■□□□□ 0.41
RERE-204ENST00000400908 RAPGEF2Q9Y4G8 1499 aa17.6■□□□□ 0.41
RERE-204ENST00000400908 TPM4P67936 248 aa17.59■□□□□ 0.41
RERE-204ENST00000400908 FRAT1Q92837 279 aaPredicted RBP17.58■□□□□ 0.41
RERE-204ENST00000400908 CFAP44Q96MT7 982 aa17.58■□□□□ 0.4
RERE-204ENST00000400908 GBP4Q96PP9 640 aa17.57■□□□□ 0.4
RERE-204ENST00000400908 RGL3Q3MIN7 710 aa17.57■□□□□ 0.4
RERE-204ENST00000400908 ARHGAP35Q9NRY4 1499 aa17.56■□□□□ 0.4
RERE-204ENST00000400908 SPRYD3Q8NCJ5 442 aa17.56■□□□□ 0.4
RERE-204ENST00000400908 ISY1Q9ULR0 285 aaKnown RBP17.56■□□□□ 0.4
RERE-204ENST00000400908 HTATSF1O43719 755 aaKnown RBP17.55■□□□□ 0.4
RERE-204ENST00000400908 SYAP1Q96A49 352 aaPredicted RBP17.54■□□□□ 0.4
RERE-204ENST00000400908 PDE4CQ08493 712 aa17.54■□□□□ 0.4
RERE-204ENST00000400908 KNSTRNQ9Y448 316 aa17.54■□□□□ 0.4
RERE-204ENST00000400908 PPP1R15AO75807 674 aaPredicted RBP17.54■□□□□ 0.4
RERE-204ENST00000400908 NEUROD2Q15784 382 aa17.53■□□□□ 0.4
RERE-204ENST00000400908 NUDCQ9Y266 331 aa17.52■□□□□ 0.4
RERE-204ENST00000400908 CDCA8Q53HL2 280 aa17.52■□□□□ 0.4
RERE-204ENST00000400908 SETD5Q9C0A6 1442 aa17.51■□□□□ 0.39
RERE-204ENST00000400908 FMN1Q68DA7 1419 aa17.51■□□□□ 0.39
RERE-204ENST00000400908 SENP3-EIF4A1A0A087X0R7 540 aa17.5■□□□□ 0.39
RERE-204ENST00000400908 HSP90AA2PQ14568 343 aaPredicted RBP17.49■□□□□ 0.39
RERE-204ENST00000400908 FANCD2Q9BXW9 1451 aa17.49■□□□□ 0.39
RERE-204ENST00000400908 CEP89Q96ST8 783 aa17.49■□□□□ 0.39
RERE-204ENST00000400908 TPM3P06753 285 aa17.47■□□□□ 0.39
RERE-204ENST00000400908 CCDC34Q96HJ3 373 aa17.47■□□□□ 0.39
RERE-204ENST00000400908 GZF1Q9H116 711 aaPredicted RBP17.47■□□□□ 0.39
RERE-204ENST00000400908 FHOD3Q2V2M9 1422 aa17.47■□□□□ 0.39
RERE-204ENST00000400908 GOLGA6L3A6NEY3 463 aa17.46■□□□□ 0.39
RERE-204ENST00000400908 SENP3Q9H4L4 574 aaPredicted RBP17.46■□□□□ 0.39
RERE-204ENST00000400908 PATL2C9JE40 543 aaKnown RBP17.46■□□□□ 0.39
RERE-204ENST00000400908 CARD11Q9BXL7 1154 aa17.45■□□□□ 0.38
RERE-204ENST00000400908 CARMIL2Q6F5E8 1435 aa17.44■□□□□ 0.38
RERE-204ENST00000400908 KIAA1211Q6ZU35 1233 aa17.43■□□□□ 0.38
RERE-204ENST00000400908 B4GALNT3Q6L9W6 998 aa17.43■□□□□ 0.38
RERE-204ENST00000400908 VSIG10Q8N0Z9 540 aa17.42■□□□□ 0.38
RERE-204ENST00000400908 RAB3GAP2Q9H2M9 1393 aa17.41■□□□□ 0.38
RERE-204ENST00000400908 RRP12Q5JTH9 1297 aaKnown RBP17.4■□□□□ 0.38
RERE-204ENST00000400908 GPS2Q13227 327 aa17.4■□□□□ 0.38
RERE-204ENST00000400908 NCAPD3P42695 1498 aa17.38■□□□□ 0.37
RERE-204ENST00000400908 TIMELESSQ9UNS1 1208 aa17.37■□□□□ 0.37
RERE-204ENST00000400908 CSPP1Q1MSJ5 1256 aa17.37■□□□□ 0.37
RERE-204ENST00000400908 RSPH6AQ9H0K4 717 aa17.37■□□□□ 0.37
RERE-204ENST00000400908 HSP90B1P14625 803 aaKnown RBP17.37■□□□□ 0.37
RERE-204ENST00000400908 ZNF771Q7L3S4 317 aaPredicted RBP17.37■□□□□ 0.37
RERE-204ENST00000400908 FGD5Q6ZNL6 1462 aa17.35■□□□□ 0.37
RERE-204ENST00000400908 SLKQ9H2G2 1235 aaPredicted RBP17.34■□□□□ 0.37
RERE-204ENST00000400908 CALD1Q05682 793 aaKnown RBP17.33■□□□□ 0.37
RERE-204ENST00000400908 RASSF8Q8NHQ8 419 aa17.33■□□□□ 0.37
RERE-204ENST00000400908 CREBRFQ8IUR6 639 aa17.33■□□□□ 0.36
RERE-204ENST00000400908 FOXD1Q16676 465 aa17.33■□□□□ 0.36
RERE-204ENST00000400908 CCDC70Q6NSX1 233 aa17.32■□□□□ 0.36
RERE-204ENST00000400908 U2SURPO15042 1029 aaKnown RBP17.32■□□□□ 0.36
RERE-204ENST00000400908 RBM19Q9Y4C8 960 aaKnown RBP17.32■□□□□ 0.36
RERE-204ENST00000400908 DCAF11Q8TEB1 546 aa17.31■□□□□ 0.36
RERE-204ENST00000400908 PHF14O94880 888 aa17.31■□□□□ 0.36
RERE-204ENST00000400908 LMOD2Q6P5Q4 547 aa17.3■□□□□ 0.36
RERE-204ENST00000400908 FBXO3Q9UK99 471 aa17.3■□□□□ 0.36
RERE-204ENST00000400908 IGF1RP08069 1367 aa17.29■□□□□ 0.36
RERE-204ENST00000400908 CCAR2Q8N163 923 aaKnown RBP17.29■□□□□ 0.36
RERE-204ENST00000400908 PKD2Q13563 968 aa17.28■□□□□ 0.36
RERE-204ENST00000400908 RAD54L2Q9Y4B4 1467 aa17.28■□□□□ 0.36
RERE-204ENST00000400908 TSR1Q2NL82 804 aaKnown RBP17.27■□□□□ 0.36
RERE-204ENST00000400908 TEX35Q5T0J7 233 aa17.27■□□□□ 0.36
RERE-204ENST00000400908 MPHOSPH9Q99550 1183 aa17.27■□□□□ 0.36
RERE-204ENST00000400908 TAF7LQ5H9L4 462 aa17.26■□□□□ 0.35
RERE-204ENST00000400908 APBB1O00213 710 aa17.25■□□□□ 0.35
RERE-204ENST00000400908 APPP05067 770 aa17.25■□□□□ 0.35
RERE-204ENST00000400908 JPH4Q96JJ6 628 aa17.24■□□□□ 0.35
RERE-204ENST00000400908 KANK1Q14678 1352 aa17.24■□□□□ 0.35
RERE-204ENST00000400908 HSPA5P11021 654 aaKnown RBP17.24■□□□□ 0.35
RERE-204ENST00000400908 CCDC18Q5T9S5 1454 aa17.24■□□□□ 0.35
RERE-204ENST00000400908 NOM1Q5C9Z4 860 aaKnown RBP17.23■□□□□ 0.35
RERE-204ENST00000400908 GAPVD1Q14C86 1478 aa17.23■□□□□ 0.35
RERE-204ENST00000400908 POGKQ9P215 609 aa17.23■□□□□ 0.35
RERE-204ENST00000400908 ANKRD30AQ9BXX3 1397 aa17.22■□□□□ 0.35
RERE-204ENST00000400908 SYNJ1O43426 1573 aa17.22■□□□□ 0.35
RERE-204ENST00000400908 PES1O00541 588 aaKnown RBP17.22■□□□□ 0.35
RERE-204ENST00000400908 IPO8O15397 1037 aaKnown RBP17.22■□□□□ 0.35
RERE-204ENST00000400908 CC2D1BQ5T0F9 858 aaKnown RBP17.22■□□□□ 0.35
RERE-204ENST00000400908 TCERG1O14776 1098 aaKnown RBP17.21■□□□□ 0.35
RERE-204ENST00000400908 HMMRO75330 724 aa17.21■□□□□ 0.35
RERE-204ENST00000400908 TPD52L1Q16890 204 aaPredicted RBP17.21■□□□□ 0.35
RERE-204ENST00000400908 TPM1P09493 284 aa17.2■□□□□ 0.34
RERE-204ENST00000400908 RWDD1Q9H446 243 aaPredicted RBP17.2■□□□□ 0.34
RERE-204ENST00000400908 NUP155O75694 1391 aa17.2■□□□□ 0.34
RERE-204ENST00000400908 ANO8Q9HCE9 1232 aaPredicted RBP17.19■□□□□ 0.34
RERE-204ENST00000400908 TPM2P07951 284 aa17.18■□□□□ 0.34
RERE-204ENST00000400908 HNRNPMP52272 730 aaKnown RBP eCLIP17.18■□□□□ 0.347e-7■■■■■ 33.6
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms