RNA–Protein interactions for RNA: ENST00000400181.8

KDM1A-202, Transcript of lysine demethylase 1A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM1A, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-202ENST00000400181 MAGI3Q5TCQ9 1506 aa24.46■■□□□ 1.51
KDM1A-202ENST00000400181 DNMBPQ6XZF7 1577 aa24.46■■□□□ 1.51
KDM1A-202ENST00000400181 EHBP1L1Q8N3D4 1523 aa24.44■■□□□ 1.5
KDM1A-202ENST00000400181 NPM2Q86SE8 214 aaKnown RBP24.44■■□□□ 1.5
KDM1A-202ENST00000400181 NUDCQ9Y266 331 aa24.43■■□□□ 1.5
KDM1A-202ENST00000400181 CUL7Q14999 1698 aa24.42■■□□□ 1.5
KDM1A-202ENST00000400181 UGGT2Q9NYU1 1516 aa24.42■■□□□ 1.5
KDM1A-202ENST00000400181 CC2D2AQ9P2K1 1620 aa24.42■■□□□ 1.5
KDM1A-202ENST00000400181 SALL2Q9Y467 1007 aaPredicted RBP24.41■■□□□ 1.5
KDM1A-202ENST00000400181 ZBTB47Q9UFB7 747 aaPredicted RBP24.41■■□□□ 1.5
KDM1A-202ENST00000400181 ZNF644Q9H582 1327 aaPredicted RBP24.4■■□□□ 1.5
KDM1A-202ENST00000400181 RTL5Q5HYW3 569 aaPredicted RBP24.4■■□□□ 1.5
KDM1A-202ENST00000400181 IPO9Q96P70 1041 aaKnown RBP24.38■■□□□ 1.49
KDM1A-202ENST00000400181 ANKRD30BQ9BXX2 1392 aa24.37■■□□□ 1.49
KDM1A-202ENST00000400181 HECW1Q76N89 1606 aa24.37■■□□□ 1.49
KDM1A-202ENST00000400181 TMC1Q8TDI8 760 aa24.36■■□□□ 1.49
KDM1A-202ENST00000400181 SMG6Q86US8 1419 aaKnown RBP24.35■■□□□ 1.49
KDM1A-202ENST00000400181 SAMD9Q5K651 1589 aa24.34■■□□□ 1.49
KDM1A-202ENST00000400181 CDK13Q14004 1512 aaKnown RBP24.33■■□□□ 1.49
KDM1A-202ENST00000400181 GAPVD1Q14C86 1478 aa24.32■■□□□ 1.48
KDM1A-202ENST00000400181 RPRD2Q5VT52 1461 aaKnown RBP24.31■■□□□ 1.48
KDM1A-202ENST00000400181 GCC2Q8IWJ2 1684 aa24.3■■□□□ 1.48
KDM1A-202ENST00000400181 SPATA31E1Q6ZUB1 1445 aa24.3■■□□□ 1.48
KDM1A-202ENST00000400181 TCOF1Q13428 1488 aaKnown RBP24.29■■□□□ 1.48
KDM1A-202ENST00000400181 TEX14Q8IWB6 1497 aa24.28■■□□□ 1.48
KDM1A-202ENST00000400181 ARHGEF11O15085 1522 aa24.27■■□□□ 1.48
KDM1A-202ENST00000400181 DHX29Q7Z478 1369 aaKnown RBP24.27■■□□□ 1.48
KDM1A-202ENST00000400181 USP47Q96K76 1375 aa24.26■■□□□ 1.47
KDM1A-202ENST00000400181 LAS1LQ9Y4W2 734 aaKnown RBP24.26■■□□□ 1.47
KDM1A-202ENST00000400181 ZNF777Q9ULD5 760 aaPredicted RBP24.26■■□□□ 1.47
KDM1A-202ENST00000400181 EPRSP07814 1512 aaKnown RBP24.25■■□□□ 1.47
KDM1A-202ENST00000400181 PNISRQ8TF01 805 aaKnown RBP24.24■■□□□ 1.47
KDM1A-202ENST00000400181 URB2Q14146 1524 aaKnown RBP24.24■■□□□ 1.47
KDM1A-202ENST00000400181 EXOC6Q8TAG9 804 aa24.24■■□□□ 1.47
KDM1A-202ENST00000400181 KDM2AQ9Y2K7 1162 aa24.23■■□□□ 1.47
KDM1A-202ENST00000400181 THOC2Q8NI27 1593 aaKnown RBP24.22■■□□□ 1.47
KDM1A-202ENST00000400181 RTN4Q9NQC3 1192 aaKnown RBP24.22■■□□□ 1.47
KDM1A-202ENST00000400181 RNF123Q5XPI4 1314 aa24.21■■□□□ 1.47
KDM1A-202ENST00000400181 DAPK1P53355 1430 aa24.21■■□□□ 1.47
KDM1A-202ENST00000400181 MIA2Q96PC5 1412 aa24.2■■□□□ 1.46
KDM1A-202ENST00000400181 PKD2Q13563 968 aa24.19■■□□□ 1.46
KDM1A-202ENST00000400181 ABCC5O15440 1437 aa24.18■■□□□ 1.46
KDM1A-202ENST00000400181 CARD11Q9BXL7 1154 aa24.16■■□□□ 1.46
KDM1A-202ENST00000400181 IL27Q8NEV9 243 aa24.15■■□□□ 1.46
KDM1A-202ENST00000400181 SKAP1Q86WV1 359 aa24.14■■□□□ 1.45
KDM1A-202ENST00000400181 RRP1P56182 461 aaKnown RBP24.14■■□□□ 1.45
KDM1A-202ENST00000400181 ANO8Q9HCE9 1232 aaPredicted RBP24.13■■□□□ 1.45
KDM1A-202ENST00000400181 LAMC3Q9Y6N6 1575 aa24.12■■□□□ 1.45
KDM1A-202ENST00000400181 NEFMP07197 916 aa24.12■■□□□ 1.45
KDM1A-202ENST00000400181 ST20-MTHFSA0A0A6YYL1 179 aa24.11■■□□□ 1.45
KDM1A-202ENST00000400181 BCORL1Q5H9F3 1711 aa24.11■■□□□ 1.45
KDM1A-202ENST00000400181 ABCA5Q8WWZ7 1642 aa24.11■■□□□ 1.45
KDM1A-202ENST00000400181 RCAN3Q9UKA8 241 aa24.11■■□□□ 1.45
KDM1A-202ENST00000400181 PDE4AP27815 886 aa24.1■■□□□ 1.45
KDM1A-202ENST00000400181 CFDP1Q9UEE9 299 aaPredicted RBP24.1■■□□□ 1.45
KDM1A-202ENST00000400181 ROCK1Q13464 1354 aa24.09■■□□□ 1.45
KDM1A-202ENST00000400181 PLIN1O60240 522 aa24.08■■□□□ 1.45
KDM1A-202ENST00000400181 DNAJC5BQ9UF47 199 aa24.06■■□□□ 1.44
KDM1A-202ENST00000400181 CDCA7LQ96GN5 454 aa24.06■■□□□ 1.44
KDM1A-202ENST00000400181 PZPP20742 1482 aa24.05■■□□□ 1.44
KDM1A-202ENST00000400181 TCERG1O14776 1098 aaKnown RBP24.03■■□□□ 1.44
KDM1A-202ENST00000400181 KIF15Q9NS87 1388 aa24.03■■□□□ 1.44
KDM1A-202ENST00000400181 DCAF11Q8TEB1 546 aa24.02■■□□□ 1.44
KDM1A-202ENST00000400181 MYBBP1AQ9BQG0 1328 aaKnown RBP24.02■■□□□ 1.43
KDM1A-202ENST00000400181 IQGAP2Q13576 1575 aa24■■□□□ 1.43
KDM1A-202ENST00000400181 POLR1AO95602 1720 aaPredicted RBP24■■□□□ 1.43
KDM1A-202ENST00000400181 WDR62O43379 1518 aa24■■□□□ 1.43
KDM1A-202ENST00000400181 KIAA1107Q9UPP5 1409 aa24■■□□□ 1.43
KDM1A-202ENST00000400181 BACH2Q9BYV9 841 aa23.99■■□□□ 1.43
KDM1A-202ENST00000400181 PDS5BQ9NTI5 1447 aa23.98■■□□□ 1.43
KDM1A-202ENST00000400181 DNMT1P26358 1616 aaKnown RBP23.97■■□□□ 1.43
KDM1A-202ENST00000400181 PRG4Q92954 1404 aaPredicted RBP23.96■■□□□ 1.43
KDM1A-202ENST00000400181 CC2D1BQ5T0F9 858 aaKnown RBP23.96■■□□□ 1.43
KDM1A-202ENST00000400181 KIF21AQ7Z4S6 1674 aa23.96■■□□□ 1.43
KDM1A-202ENST00000400181 SLC4A3P48751 1232 aa23.95■■□□□ 1.43
KDM1A-202ENST00000400181 ROCK2O75116 1388 aaKnown RBP23.95■■□□□ 1.43
KDM1A-202ENST00000400181 RALBP1Q15311 655 aa23.95■■□□□ 1.42
KDM1A-202ENST00000400181 NUP155O75694 1391 aa23.95■■□□□ 1.42
KDM1A-202ENST00000400181 BRD4O60885 1362 aaPredicted RBP23.94■■□□□ 1.42
KDM1A-202ENST00000400181 LRPPRCP42704 1394 aaKnown RBP23.94■■□□□ 1.42
KDM1A-202ENST00000400181 ARID4BQ4LE39 1312 aaPredicted RBP23.94■■□□□ 1.42
KDM1A-202ENST00000400181 MBD5Q9P267 1494 aa23.93■■□□□ 1.42
KDM1A-202ENST00000400181 PRKCSHP14314 528 aaPredicted RBP23.92■■□□□ 1.42
KDM1A-202ENST00000400181 CRBNQ96SW2 442 aa23.92■■□□□ 1.42
KDM1A-202ENST00000400181 KDM5CP41229 1560 aa23.92■■□□□ 1.42
KDM1A-202ENST00000400181 RGL3Q3MIN7 710 aa23.91■■□□□ 1.42
KDM1A-202ENST00000400181 NLRP13Q86W25 1043 aa23.9■■□□□ 1.42
KDM1A-202ENST00000400181 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.89■■□□□ 1.42
KDM1A-202ENST00000400181 CAMSAP2Q08AD1 1489 aa23.89■■□□□ 1.41
KDM1A-202ENST00000400181 NUP153P49790 1475 aaKnown RBP23.88■■□□□ 1.41
KDM1A-202ENST00000400181 ANKRD50Q9ULJ7 1429 aa23.87■■□□□ 1.41
KDM1A-202ENST00000400181 ANKRD30AQ9BXX3 1397 aa23.86■■□□□ 1.41
KDM1A-202ENST00000400181 KTN1Q86UP2 1357 aaKnown RBP23.86■■□□□ 1.41
KDM1A-202ENST00000400181 KIF14Q15058 1648 aa23.85■■□□□ 1.41
KDM1A-202ENST00000400181 PPM1GO15355 546 aaPredicted RBP23.85■■□□□ 1.41
KDM1A-202ENST00000400181 MS4A1P11836 297 aa23.84■■□□□ 1.41
KDM1A-202ENST00000400181 C20orf194Q5TEA3 1177 aa23.84■■□□□ 1.41
KDM1A-202ENST00000400181 NBPF1Q3BBV0 1214 aa23.82■■□□□ 1.4
KDM1A-202ENST00000400181 RALGAPBQ86X10 1494 aa23.82■■□□□ 1.4
KDM1A-202ENST00000400181 DAXXQ9UER7 740 aaPredicted RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms