RNA–Protein interactions for RNA: ENST00000400163.6

COL4A2-202, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 5

Gene COL4A2, Length 491 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-202ENST00000400163 MLECQ14165 292 aa30.68■■■□□ 2.5
COL4A2-202ENST00000400163 FER1L4A9Z1Z3 1794 aa30.63■■■□□ 2.49
COL4A2-202ENST00000400163 ATP1B4Q9UN42 357 aaPredicted RBP30.61■■■□□ 2.49
COL4A2-202ENST00000400163 ATP10AO60312 1499 aa30.58■■■□□ 2.49
COL4A2-202ENST00000400163 EFCAB2Q5VUJ9 269 aa30.58■■■□□ 2.49
COL4A2-202ENST00000400163 FMN1Q68DA7 1419 aa30.56■■■□□ 2.48
COL4A2-202ENST00000400163 MYO5CQ9NQX4 1742 aa30.56■■■□□ 2.48
COL4A2-202ENST00000400163 UBTFP17480 764 aaKnown RBP30.55■■■□□ 2.48
COL4A2-202ENST00000400163 EHMT2Q96KQ7 1210 aa30.55■■■□□ 2.48
COL4A2-202ENST00000400163 ARHGEF12Q9NZN5 1544 aa30.54■■■□□ 2.48
COL4A2-202ENST00000400163 CDK11AQ9UQ88 783 aaPredicted RBP30.53■■■□□ 2.48
COL4A2-202ENST00000400163 C9orf84Q5VXU9 1444 aa30.53■■■□□ 2.48
COL4A2-202ENST00000400163 ARHGAP35Q9NRY4 1499 aa30.5■■■□□ 2.47
COL4A2-202ENST00000400163 CERKQ8TCT0 537 aa30.5■■■□□ 2.47
COL4A2-202ENST00000400163 KIF14Q15058 1648 aa30.5■■■□□ 2.47
COL4A2-202ENST00000400163 CEBPAP49715 358 aaPredicted RBP30.46■■■□□ 2.47
COL4A2-202ENST00000400163 TROQ12816 1431 aaPredicted RBP30.45■■■□□ 2.46
COL4A2-202ENST00000400163 PREX1Q8TCU6 1659 aa30.45■■■□□ 2.46
COL4A2-202ENST00000400163 ZNF518AQ6AHZ1 1483 aa30.44■■■□□ 2.46
COL4A2-202ENST00000400163 AFAP1Q8N556 730 aa30.44■■■□□ 2.46
COL4A2-202ENST00000400163 ARHGAP5Q13017 1502 aa30.42■■■□□ 2.46
COL4A2-202ENST00000400163 KDM5CP41229 1560 aa30.41■■■□□ 2.46
COL4A2-202ENST00000400163 CLIP1P30622 1438 aa30.39■■■□□ 2.45
COL4A2-202ENST00000400163 MYT1LQ9UL68 1186 aa30.38■■■□□ 2.45
COL4A2-202ENST00000400163 LRRIQ1Q96JM4 1722 aa30.37■■■□□ 2.45
COL4A2-202ENST00000400163 SETD1BQ9UPS6 1966 aaKnown RBP30.36■■■□□ 2.45
COL4A2-202ENST00000400163 DIP2CQ9Y2E4 1556 aa30.34■■■□□ 2.45
COL4A2-202ENST00000400163 CDC42BPBQ9Y5S2 1711 aa30.33■■■□□ 2.45
COL4A2-202ENST00000400163 STRCQ7RTU9 1775 aa30.32■■■□□ 2.44
COL4A2-202ENST00000400163 DMRT2Q9Y5R5 561 aa30.31■■■□□ 2.44
COL4A2-202ENST00000400163 REREQ9P2R6 1566 aa30.3■■■□□ 2.44
COL4A2-202ENST00000400163 UHRF1BP1Q6BDS2 1440 aa30.3■■■□□ 2.44
COL4A2-202ENST00000400163 MLH3Q9UHC1 1453 aa30.29■■■□□ 2.44
COL4A2-202ENST00000400163 ABCA6Q8N139 1617 aa30.28■■■□□ 2.44
COL4A2-202ENST00000400163 TRAPPC8Q9Y2L5 1435 aa30.25■■■□□ 2.43
COL4A2-202ENST00000400163 PREX2Q70Z35 1606 aa30.24■■■□□ 2.43
COL4A2-202ENST00000400163 C3P01024 1663 aa30.23■■■□□ 2.43
COL4A2-202ENST00000400163 ABCC1P33527 1531 aa30.22■■■□□ 2.43
COL4A2-202ENST00000400163 AGLP35573 1532 aa30.22■■■□□ 2.43
COL4A2-202ENST00000400163 CHIC1Q5VXU3 224 aa30.22■■■□□ 2.43
COL4A2-202ENST00000400163 ESF1Q9H501 851 aaKnown RBP30.2■■■□□ 2.43
COL4A2-202ENST00000400163 CASKIN1Q8WXD9 1431 aa30.2■■■□□ 2.42
COL4A2-202ENST00000400163 ITSN2Q9NZM3 1697 aa30.2■■■□□ 2.42
COL4A2-202ENST00000400163 CCDC18Q5T9S5 1454 aa30.19■■■□□ 2.42
COL4A2-202ENST00000400163 KIDINS220Q9ULH0 1771 aa30.16■■■□□ 2.42
COL4A2-202ENST00000400163 PTPRTO14522 1441 aa30.14■■■□□ 2.42
COL4A2-202ENST00000400163 CDC42BPAQ5VT25 1732 aa30.14■■■□□ 2.42
COL4A2-202ENST00000400163 CNTLNQ9NXG0 1405 aa30.09■■■□□ 2.41
COL4A2-202ENST00000400163 ZNF777Q9ULD5 760 aaPredicted RBP30.07■■■□□ 2.4
COL4A2-202ENST00000400163 DISP3Q9P2K9 1392 aa30.05■■■□□ 2.4
COL4A2-202ENST00000400163 SAMD9LQ8IVG5 1584 aa30.05■■■□□ 2.4
COL4A2-202ENST00000400163 FYCO1Q9BQS8 1478 aa30.02■■■□□ 2.4
COL4A2-202ENST00000400163 LTBP4Q8N2S1 1624 aa30.02■■■□□ 2.4
COL4A2-202ENST00000400163 NCOA1Q15788 1441 aa30.02■■■□□ 2.4
COL4A2-202ENST00000400163 HNRNPMP52272 730 aaKnown RBP eCLIP30■■■□□ 2.39
COL4A2-202ENST00000400163 SYCP2Q9BX26 1530 aa30■■■□□ 2.39
COL4A2-202ENST00000400163 GPATCH8Q9UKJ3 1502 aaKnown RBP30■■■□□ 2.39
COL4A2-202ENST00000400163 SPAG9O60271 1321 aaKnown RBP29.99■■■□□ 2.39
COL4A2-202ENST00000400163 NPATQ14207 1427 aa29.99■■■□□ 2.39
COL4A2-202ENST00000400163 MROH2AA6NES4 1674 aa29.99■■■□□ 2.39
COL4A2-202ENST00000400163 ILDR2Q71H61 639 aa29.99■■■□□ 2.39
COL4A2-202ENST00000400163 ZMYM3Q14202 1370 aa29.98■■■□□ 2.39
COL4A2-202ENST00000400163 SUPT6HQ7KZ85 1726 aaKnown RBP29.97■■■□□ 2.39
COL4A2-202ENST00000400163 CAMSAP1Q5T5Y3 1602 aa29.95■■■□□ 2.38
COL4A2-202ENST00000400163 IQSEC2Q5JU85 1478 aa29.92■■■□□ 2.38
COL4A2-202ENST00000400163 ATP7AQ04656 1500 aa29.91■■■□□ 2.38
COL4A2-202ENST00000400163 KIAA1107Q9UPP5 1409 aa29.91■■■□□ 2.38
COL4A2-202ENST00000400163 CFDP1Q9UEE9 299 aaPredicted RBP29.91■■■□□ 2.38
COL4A2-202ENST00000400163 CLTCQ00610 1675 aaKnown RBP29.89■■■□□ 2.38
COL4A2-202ENST00000400163 PLEKHH2Q8IVE3 1493 aa29.88■■■□□ 2.37
COL4A2-202ENST00000400163 NCKAP5LQ9HCH0 1330 aa29.88■■■□□ 2.37
COL4A2-202ENST00000400163 A2MP01023 1474 aa29.87■■■□□ 2.37
COL4A2-202ENST00000400163 PLXNC1O60486 1568 aa29.87■■■□□ 2.37
COL4A2-202ENST00000400163 INO80Q9ULG1 1556 aaPredicted RBP29.87■■■□□ 2.37
COL4A2-202ENST00000400163 SOCS7O14512 581 aa29.86■■■□□ 2.37
COL4A2-202ENST00000400163 CCNB3Q8WWL7 1395 aa29.86■■■□□ 2.37
COL4A2-202ENST00000400163 GGT6Q6P531 493 aa29.84■■■□□ 2.37
COL4A2-202ENST00000400163 SPATA31D1Q6ZQQ2 1576 aa29.84■■■□□ 2.37
COL4A2-202ENST00000400163 PTPRKQ15262 1439 aa29.82■■■□□ 2.36
COL4A2-202ENST00000400163 MYO3AQ8NEV4 1616 aa29.82■■■□□ 2.36
COL4A2-202ENST00000400163 ZNF335Q9H4Z2 1342 aaPredicted RBP29.81■■■□□ 2.36
COL4A2-202ENST00000400163 ZNF142P52746 1687 aaPredicted RBP29.81■■■□□ 2.36
COL4A2-202ENST00000400163 PKD2Q13563 968 aa29.79■■■□□ 2.36
COL4A2-202ENST00000400163 PLA2R1Q13018 1463 aa29.79■■■□□ 2.36
COL4A2-202ENST00000400163 MTUS2Q5JR59 1369 aa29.78■■■□□ 2.36
COL4A2-202ENST00000400163 CEP170BQ9Y4F5 1589 aaPredicted RBP29.77■■■□□ 2.36
COL4A2-202ENST00000400163 ADGBQ8N7X0 1667 aa29.76■■■□□ 2.36
COL4A2-202ENST00000400163 PPP6R1Q9UPN7 881 aa29.76■■■□□ 2.35
COL4A2-202ENST00000400163 ZNF644Q9H582 1327 aaPredicted RBP29.75■■■□□ 2.35
COL4A2-202ENST00000400163 TCOF1Q13428 1488 aaKnown RBP29.74■■■□□ 2.35
COL4A2-202ENST00000400163 UBAP1LF5GYI3 381 aa29.71■■■□□ 2.35
COL4A2-202ENST00000400163 TIAM1Q13009 1591 aa29.7■■■□□ 2.35
COL4A2-202ENST00000400163 MBD5Q9P267 1494 aa29.7■■■□□ 2.35
COL4A2-202ENST00000400163 RTEL1-TNFRSF6BF6WH68 1400 aa29.66■■■□□ 2.34
COL4A2-202ENST00000400163 A2ML1A8K2U0 1454 aa29.65■■■□□ 2.34
COL4A2-202ENST00000400163 EHBP1L1Q8N3D4 1523 aa29.64■■■□□ 2.34
COL4A2-202ENST00000400163 DHX29Q7Z478 1369 aaKnown RBP29.64■■■□□ 2.33
COL4A2-202ENST00000400163 DNMT1P26358 1616 aaKnown RBP29.63■■■□□ 2.33
COL4A2-202ENST00000400163 CEP162Q5TB80 1403 aa29.6■■■□□ 2.33
COL4A2-202ENST00000400163 KIF3BO15066 747 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms