RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 PTPRGP23470 1445 aa18.18■□□□□ 0.5
SIRPA-203ENST00000400068 SNAPC4Q5SXM2 1469 aa18.17■□□□□ 0.5
SIRPA-203ENST00000400068 EFCAB5A4FU69 1503 aa18.17■□□□□ 0.5
SIRPA-203ENST00000400068 LAMC3Q9Y6N6 1575 aa18.16■□□□□ 0.5
SIRPA-203ENST00000400068 CCDC136Q96JN2 1154 aa18.15■□□□□ 0.5
SIRPA-203ENST00000400068 NPM2Q86SE8 214 aaKnown RBP18.15■□□□□ 0.5
SIRPA-203ENST00000400068 B4GALNT3Q6L9W6 998 aa18.13■□□□□ 0.49
SIRPA-203ENST00000400068 PODXL2Q9NZ53 605 aa18.13■□□□□ 0.49
SIRPA-203ENST00000400068 STAG3Q9UJ98 1225 aa18.13■□□□□ 0.49
SIRPA-203ENST00000400068 ST20-MTHFSA0A0A6YYL1 179 aa18.12■□□□□ 0.49
SIRPA-203ENST00000400068 NAIPQ13075 1403 aa18.11■□□□□ 0.49
SIRPA-203ENST00000400068 NBPF8Q3BBV2 869 aa18.11■□□□□ 0.49
SIRPA-203ENST00000400068 WASHC2AQ641Q2 1341 aa18.1■□□□□ 0.49
SIRPA-203ENST00000400068 PTPRKQ15262 1439 aa18.09■□□□□ 0.49
SIRPA-203ENST00000400068 GGT6Q6P531 493 aa18.09■□□□□ 0.49
SIRPA-203ENST00000400068 EFCAB2Q5VUJ9 269 aa18.09■□□□□ 0.49
SIRPA-203ENST00000400068 HFM1A2PYH4 1435 aa18.09■□□□□ 0.49
SIRPA-203ENST00000400068 TNNT2P45379 298 aaPredicted RBP18.08■□□□□ 0.49
SIRPA-203ENST00000400068 EPRSP07814 1512 aaKnown RBP18.08■□□□□ 0.48
SIRPA-203ENST00000400068 WDR43Q15061 677 aaKnown RBP eCLIP18.08■□□□□ 0.48
SIRPA-203ENST00000400068 IFT140Q96RY7 1462 aa18.07■□□□□ 0.48
SIRPA-203ENST00000400068 CANXP27824 592 aaKnown RBP18.07■□□□□ 0.48
SIRPA-203ENST00000400068 ROCK2O75116 1388 aaKnown RBP18.07■□□□□ 0.48
SIRPA-203ENST00000400068 KIF3BO15066 747 aa18.06■□□□□ 0.48
SIRPA-203ENST00000400068 PRKRIP1Q9H875 184 aaPredicted RBP18.05■□□□□ 0.48
SIRPA-203ENST00000400068 PLB1Q6P1J6 1458 aa18.05■□□□□ 0.48
SIRPA-203ENST00000400068 ANP32EQ9BTT0 268 aa18.04■□□□□ 0.48
SIRPA-203ENST00000400068 KNSTRNQ9Y448 316 aa18.04■□□□□ 0.48
SIRPA-203ENST00000400068 CUL7Q14999 1698 aa18.04■□□□□ 0.48
SIRPA-203ENST00000400068 PLEKHG5O94827 1062 aa18.03■□□□□ 0.48
SIRPA-203ENST00000400068 CCDC184Q52MB2 194 aa18.03■□□□□ 0.48
SIRPA-203ENST00000400068 IQGAP2Q13576 1575 aa18.03■□□□□ 0.48
SIRPA-203ENST00000400068 EHBP1L1Q8N3D4 1523 aa18.02■□□□□ 0.48
SIRPA-203ENST00000400068 SAFB2Q14151 953 aaKnown RBP eCLIP18.02■□□□□ 0.48
SIRPA-203ENST00000400068 NUTM2DQ5VT03 806 aaPredicted RBP18.02■□□□□ 0.47
SIRPA-203ENST00000400068 NEUROD2Q15784 382 aa18■□□□□ 0.47
SIRPA-203ENST00000400068 KIF7Q2M1P5 1343 aa18■□□□□ 0.47
SIRPA-203ENST00000400068 KIF15Q9NS87 1388 aa18■□□□□ 0.47
SIRPA-203ENST00000400068 USP47Q96K76 1375 aa18■□□□□ 0.47
SIRPA-203ENST00000400068 ANKRD50Q9ULJ7 1429 aa17.99■□□□□ 0.47
SIRPA-203ENST00000400068 MAPKBP1O60336 1514 aa17.99■□□□□ 0.47
SIRPA-203ENST00000400068 SPAG9O60271 1321 aaKnown RBP17.99■□□□□ 0.47
SIRPA-203ENST00000400068 C11orf95C9JLR9 678 aaPredicted RBP17.99■□□□□ 0.47
SIRPA-203ENST00000400068 MAP3K1Q13233 1512 aa17.98■□□□□ 0.47
SIRPA-203ENST00000400068 TSHZ2Q9NRE2 1034 aa17.98■□□□□ 0.47
SIRPA-203ENST00000400068 KIAA0586Q9BVV6 1533 aa17.98■□□□□ 0.47
SIRPA-203ENST00000400068 SUPT6HQ7KZ85 1726 aaKnown RBP17.98■□□□□ 0.47
SIRPA-203ENST00000400068 ESF1Q9H501 851 aaKnown RBP17.97■□□□□ 0.47
SIRPA-203ENST00000400068 AFAP1Q8N556 730 aa17.97■□□□□ 0.47
SIRPA-203ENST00000400068 TMF1P82094 1093 aa17.97■□□□□ 0.47
SIRPA-203ENST00000400068 MLECQ14165 292 aa17.95■□□□□ 0.46
SIRPA-203ENST00000400068 DAPK1P53355 1430 aa17.95■□□□□ 0.46
SIRPA-203ENST00000400068 TROQ12816 1431 aaPredicted RBP17.95■□□□□ 0.46
SIRPA-203ENST00000400068 CCDC7Q96M83 1385 aa17.95■□□□□ 0.46
SIRPA-203ENST00000400068 HECW1Q76N89 1606 aa17.94■□□□□ 0.46
SIRPA-203ENST00000400068 PTPN23Q9H3S7 1636 aa17.93■□□□□ 0.46
SIRPA-203ENST00000400068 THOC2Q8NI27 1593 aaKnown RBP17.93■□□□□ 0.46
SIRPA-203ENST00000400068 GRIN2AQ12879 1464 aa17.93■□□□□ 0.46
SIRPA-203ENST00000400068 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.93■□□□□ 0.46
SIRPA-203ENST00000400068 PPP4R2Q9NY27 417 aa17.92■□□□□ 0.46
SIRPA-203ENST00000400068 CCDC144AA2RUR9 1427 aa17.92■□□□□ 0.46
SIRPA-203ENST00000400068 MIA2Q96PC5 1412 aa17.92■□□□□ 0.46
SIRPA-203ENST00000400068 KIF21AQ7Z4S6 1674 aa17.91■□□□□ 0.46
SIRPA-203ENST00000400068 NBPF1Q3BBV0 1214 aa17.91■□□□□ 0.46
SIRPA-203ENST00000400068 ABCC5O15440 1437 aa17.9■□□□□ 0.46
SIRPA-203ENST00000400068 ANP32AP39687 249 aaKnown RBP17.9■□□□□ 0.46
SIRPA-203ENST00000400068 STK26Q9P289 416 aa17.9■□□□□ 0.46
SIRPA-203ENST00000400068 RSPH4AQ5TD94 716 aa17.89■□□□□ 0.45
SIRPA-203ENST00000400068 RBM19Q9Y4C8 960 aaKnown RBP17.89■□□□□ 0.45
SIRPA-203ENST00000400068 ARHGEF11O15085 1522 aa17.88■□□□□ 0.45
SIRPA-203ENST00000400068 ANO8Q9HCE9 1232 aaPredicted RBP17.87■□□□□ 0.45
SIRPA-203ENST00000400068 NBR1Q14596 966 aa17.87■□□□□ 0.45
SIRPA-203ENST00000400068 RTL5Q5HYW3 569 aaPredicted RBP17.87■□□□□ 0.45
SIRPA-203ENST00000400068 PANK3Q9H999 370 aa17.87■□□□□ 0.45
SIRPA-203ENST00000400068 PPM1GO15355 546 aaPredicted RBP17.87■□□□□ 0.45
SIRPA-203ENST00000400068 KANK1Q14678 1352 aa17.86■□□□□ 0.45
SIRPA-203ENST00000400068 C9orf84Q5VXU9 1444 aa17.85■□□□□ 0.45
SIRPA-203ENST00000400068 KTN1Q86UP2 1357 aaKnown RBP17.84■□□□□ 0.45
SIRPA-203ENST00000400068 GLIPR1L2Q4G1C9 344 aa17.84■□□□□ 0.45
SIRPA-203ENST00000400068 CDCA8Q53HL2 280 aa17.83■□□□□ 0.45
SIRPA-203ENST00000400068 SYNJ2O15056 1496 aa17.83■□□□□ 0.44
SIRPA-203ENST00000400068 CTTNBP2Q8WZ74 1663 aa17.83■□□□□ 0.44
SIRPA-203ENST00000400068 TRAK1Q9UPV9 953 aa17.82■□□□□ 0.44
SIRPA-203ENST00000400068 CNTLNQ9NXG0 1405 aa17.81■□□□□ 0.44
SIRPA-203ENST00000400068 ANKRD30BQ9BXX2 1392 aa17.81■□□□□ 0.44
SIRPA-203ENST00000400068 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.8■□□□□ 0.44
SIRPA-203ENST00000400068 ARID4BQ4LE39 1312 aaPredicted RBP17.8■□□□□ 0.44
SIRPA-203ENST00000400068 CYB5RLQ6IPT4 315 aa17.8■□□□□ 0.44
SIRPA-203ENST00000400068 CCDC146Q8IYE0 955 aa17.8■□□□□ 0.44
SIRPA-203ENST00000400068 ARHGAP5Q13017 1502 aa17.8■□□□□ 0.44
SIRPA-203ENST00000400068 NEFMP07197 916 aa17.79■□□□□ 0.44
SIRPA-203ENST00000400068 CAMSAP2Q08AD1 1489 aa17.79■□□□□ 0.44
SIRPA-203ENST00000400068 KIAA1107Q9UPP5 1409 aa17.79■□□□□ 0.44
SIRPA-203ENST00000400068 NUP153P49790 1475 aaKnown RBP17.78■□□□□ 0.44
SIRPA-203ENST00000400068 RALBP1Q15311 655 aa17.77■□□□□ 0.44
SIRPA-203ENST00000400068 POGKQ9P215 609 aa17.77■□□□□ 0.44
SIRPA-203ENST00000400068 UGGT2Q9NYU1 1516 aa17.77■□□□□ 0.43
SIRPA-203ENST00000400068 WASHC2CQ9Y4E1 1318 aa17.77■□□□□ 0.43
SIRPA-203ENST00000400068 NLRP13Q86W25 1043 aa17.76■□□□□ 0.43
SIRPA-203ENST00000400068 NUDCQ9Y266 331 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms