RNA–Protein interactions for RNA: ENST00000399866.3

LINC02449-202, Transcript of long intergenic non-protein coding RNA 2449, humanhuman

TSL 3 BASIC

Gene LINC02449, Length 517 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02449-202ENST00000399866 NAIPQ13075 1403 aa12.79□□□□□ -0.36
LINC02449-202ENST00000399866 TTC37Q6PGP7 1564 aa12.78□□□□□ -0.36
LINC02449-202ENST00000399866 ABCC5O15440 1437 aa12.77□□□□□ -0.37
LINC02449-202ENST00000399866 MAPKBP1O60336 1514 aa12.77□□□□□ -0.37
LINC02449-202ENST00000399866 ADGBQ8N7X0 1667 aa12.77□□□□□ -0.37
LINC02449-202ENST00000399866 CFDP1Q9UEE9 299 aaPredicted RBP12.76□□□□□ -0.37
LINC02449-202ENST00000399866 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.76□□□□□ -0.37
LINC02449-202ENST00000399866 ZNF644Q9H582 1327 aaPredicted RBP12.75□□□□□ -0.37
LINC02449-202ENST00000399866 CDC42BPBQ9Y5S2 1711 aa12.74□□□□□ -0.37
LINC02449-202ENST00000399866 ROCK1Q13464 1354 aa12.74□□□□□ -0.37
LINC02449-202ENST00000399866 MYO5CQ9NQX4 1742 aa12.74□□□□□ -0.37
LINC02449-202ENST00000399866 SAMD9LQ8IVG5 1584 aa12.73□□□□□ -0.37
LINC02449-202ENST00000399866 KDM6BO15054 1643 aa12.72□□□□□ -0.37
LINC02449-202ENST00000399866 ARHGEF5Q12774 1597 aa12.72□□□□□ -0.37
LINC02449-202ENST00000399866 ADGRL2O95490 1459 aa12.72□□□□□ -0.37
LINC02449-202ENST00000399866 SHANK2Q9UPX8 1470 aa12.72□□□□□ -0.37
LINC02449-202ENST00000399866 CHIC2Q9UKJ5 165 aa12.71□□□□□ -0.37
LINC02449-202ENST00000399866 ZNF777Q9ULD5 760 aaPredicted RBP12.7□□□□□ -0.38
LINC02449-202ENST00000399866 ARHGAP5Q13017 1502 aa12.7□□□□□ -0.38
LINC02449-202ENST00000399866 WDR7Q9Y4E6 1490 aa12.7□□□□□ -0.38
LINC02449-202ENST00000399866 RRP7BPQ9NSQ0 103 aa12.69□□□□□ -0.38
LINC02449-202ENST00000399866 SYCP2Q9BX26 1530 aa12.67□□□□□ -0.38
LINC02449-202ENST00000399866 CCDC141Q6ZP82 1450 aa12.66□□□□□ -0.38
LINC02449-202ENST00000399866 PLEKHH2Q8IVE3 1493 aa12.66□□□□□ -0.38
LINC02449-202ENST00000399866 MBD5Q9P267 1494 aa12.66□□□□□ -0.38
LINC02449-202ENST00000399866 C9orf84Q5VXU9 1444 aa12.66□□□□□ -0.38
LINC02449-202ENST00000399866 ARAP3Q8WWN8 1544 aa12.66□□□□□ -0.38
LINC02449-202ENST00000399866 PLCH2O75038 1416 aa12.65□□□□□ -0.38
LINC02449-202ENST00000399866 ABCA9Q8IUA7 1624 aa12.65□□□□□ -0.38
LINC02449-202ENST00000399866 MAST1Q9Y2H9 1570 aa12.64□□□□□ -0.39
LINC02449-202ENST00000399866 NCOA1Q15788 1441 aa12.64□□□□□ -0.39
LINC02449-202ENST00000399866 ASXL2Q76L83 1435 aa12.64□□□□□ -0.39
LINC02449-202ENST00000399866 KCNH8Q96L42 1107 aa12.64□□□□□ -0.39
LINC02449-202ENST00000399866 ANKRD30AQ9BXX3 1397 aa12.64□□□□□ -0.39
LINC02449-202ENST00000399866 ABCC1P33527 1531 aa12.63□□□□□ -0.39
LINC02449-202ENST00000399866 KIAA1107Q9UPP5 1409 aa12.62□□□□□ -0.39
LINC02449-202ENST00000399866 ACIN1Q9UKV3 1341 aaKnown RBP12.62□□□□□ -0.39
LINC02449-202ENST00000399866 RIMBP3CA6NJZ7 1639 aa12.61□□□□□ -0.39
LINC02449-202ENST00000399866 RIMBP3BA6NNM3 1639 aa12.61□□□□□ -0.39
LINC02449-202ENST00000399866 RIMBP3Q9UFD9 1639 aa12.61□□□□□ -0.39
LINC02449-202ENST00000399866 DENND4BO75064 1496 aaPredicted RBP12.6□□□□□ -0.39
LINC02449-202ENST00000399866 HNRNPMP52272 730 aaKnown RBP eCLIP12.6□□□□□ -0.39
LINC02449-202ENST00000399866 ARHGEF12Q9NZN5 1544 aa12.6□□□□□ -0.39
LINC02449-202ENST00000399866 PLXNC1O60486 1568 aa12.6□□□□□ -0.39
LINC02449-202ENST00000399866 RSPH4AQ5TD94 716 aa12.58□□□□□ -0.4
LINC02449-202ENST00000399866 TRIM52Q96A61 297 aa12.58□□□□□ -0.4
LINC02449-202ENST00000399866 KIF15Q9NS87 1388 aa12.57□□□□□ -0.4
LINC02449-202ENST00000399866 ANKRD50Q9ULJ7 1429 aa12.57□□□□□ -0.4
LINC02449-202ENST00000399866 NPM1P06748 294 aaKnown RBP eCLIP12.57□□□□□ -0.4
LINC02449-202ENST00000399866 TSPY4P0CV99 314 aa12.57□□□□□ -0.4
LINC02449-202ENST00000399866 TSPY10P0CW01 314 aa12.57□□□□□ -0.4
LINC02449-202ENST00000399866 EFCAB2Q5VUJ9 269 aa12.57□□□□□ -0.4
LINC02449-202ENST00000399866 PZPP20742 1482 aa12.56□□□□□ -0.4
LINC02449-202ENST00000399866 KDM5DQ9BY66 1539 aa12.56□□□□□ -0.4
LINC02449-202ENST00000399866 FANCAO15360 1455 aa12.55□□□□□ -0.4
LINC02449-202ENST00000399866 SIN3AQ96ST3 1273 aa12.55□□□□□ -0.4
LINC02449-202ENST00000399866 CFAP74Q9C0B2 1584 aa12.54□□□□□ -0.4
LINC02449-202ENST00000399866 NEUROD1Q13562 356 aa12.53□□□□□ -0.4
LINC02449-202ENST00000399866 MPHOSPH9Q99550 1183 aa12.53□□□□□ -0.4
LINC02449-202ENST00000399866 TIMELESSQ9UNS1 1208 aa12.53□□□□□ -0.4
LINC02449-202ENST00000399866 TRAPPC8Q9Y2L5 1435 aa12.53□□□□□ -0.4
LINC02449-202ENST00000399866 ZFYVE16Q7Z3T8 1539 aa12.52□□□□□ -0.4
LINC02449-202ENST00000399866 UNC13BO14795 1591 aa12.52□□□□□ -0.4
LINC02449-202ENST00000399866 DUOX2Q9NRD8 1548 aa12.52□□□□□ -0.41
LINC02449-202ENST00000399866 INO80Q9ULG1 1556 aaPredicted RBP12.52□□□□□ -0.41
LINC02449-202ENST00000399866 ZNF316A6NFI3 1004 aaPredicted RBP12.51□□□□□ -0.41
LINC02449-202ENST00000399866 ADGRL1O94910 1474 aa12.51□□□□□ -0.41
LINC02449-202ENST00000399866 RTEL1-TNFRSF6BF6WH68 1400 aa12.49□□□□□ -0.41
LINC02449-202ENST00000399866 TONSLQ96HA7 1378 aa12.49□□□□□ -0.41
LINC02449-202ENST00000399866 CD109Q6YHK3 1445 aa12.48□□□□□ -0.41
LINC02449-202ENST00000399866 ERBINQ96RT1 1412 aa12.48□□□□□ -0.41
LINC02449-202ENST00000399866 SLC4A1APQ9BWU0 796 aaKnown RBP12.48□□□□□ -0.41
LINC02449-202ENST00000399866 ATP7AQ04656 1500 aa12.47□□□□□ -0.41
LINC02449-202ENST00000399866 ANKRD30BQ9BXX2 1392 aa12.47□□□□□ -0.41
LINC02449-202ENST00000399866 MAP3K4Q9Y6R4 1608 aa12.47□□□□□ -0.41
LINC02449-202ENST00000399866 GLI2P10070 1586 aa12.47□□□□□ -0.41
LINC02449-202ENST00000399866 MAGI2Q86UL8 1455 aa12.46□□□□□ -0.41
LINC02449-202ENST00000399866 SCAPERQ9BY12 1400 aa12.46□□□□□ -0.41
LINC02449-202ENST00000399866 CYB5RLQ6IPT4 315 aa12.46□□□□□ -0.41
LINC02449-202ENST00000399866 FAM135AQ9P2D6 1515 aa12.46□□□□□ -0.42
LINC02449-202ENST00000399866 RPRD2Q5VT52 1461 aaKnown RBP12.46□□□□□ -0.42
LINC02449-202ENST00000399866 NUP155O75694 1391 aa12.45□□□□□ -0.42
LINC02449-202ENST00000399866 IQGAP3Q86VI3 1631 aa12.45□□□□□ -0.42
LINC02449-202ENST00000399866 SPAG9O60271 1321 aaKnown RBP12.45□□□□□ -0.42
LINC02449-202ENST00000399866 FOXD1Q16676 465 aa12.45□□□□□ -0.42
LINC02449-202ENST00000399866 NEO1Q92859 1461 aa12.44□□□□□ -0.42
LINC02449-202ENST00000399866 KDM5CP41229 1560 aa12.43□□□□□ -0.42
LINC02449-202ENST00000399866 ZNF518AQ6AHZ1 1483 aa12.43□□□□□ -0.42
LINC02449-202ENST00000399866 PPP1R15AO75807 674 aaPredicted RBP12.43□□□□□ -0.42
LINC02449-202ENST00000399866 POGZQ7Z3K3 1410 aa12.43□□□□□ -0.42
LINC02449-202ENST00000399866 DIP2BQ9P265 1576 aa12.43□□□□□ -0.42
LINC02449-202ENST00000399866 TEX14Q8IWB6 1497 aa12.42□□□□□ -0.42
LINC02449-202ENST00000399866 EIF2AK4Q9P2K8 1649 aaKnown RBP12.42□□□□□ -0.42
LINC02449-202ENST00000399866 PKD2Q13563 968 aa12.42□□□□□ -0.42
LINC02449-202ENST00000399866 AFAP1Q8N556 730 aa12.42□□□□□ -0.42
LINC02449-202ENST00000399866 DEPDC5O75140 1603 aa12.41□□□□□ -0.42
LINC02449-202ENST00000399866 KIDINS220Q9ULH0 1771 aa12.41□□□□□ -0.42
LINC02449-202ENST00000399866 HECW2Q9P2P5 1572 aa12.4□□□□□ -0.42
LINC02449-202ENST00000399866 DIEXFQ68CQ4 756 aaKnown RBP12.39□□□□□ -0.43
LINC02449-202ENST00000399866 MLH3Q9UHC1 1453 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms