RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 DEKP35659 375 aaKnown RBP16.99■□□□□ 0.31
LDLRAD4-203ENST00000399848 CC2D1BQ5T0F9 858 aaKnown RBP16.99■□□□□ 0.31
LDLRAD4-203ENST00000399848 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
LDLRAD4-203ENST00000399848 TMF1P82094 1093 aa16.98■□□□□ 0.31
LDLRAD4-203ENST00000399848 USP35Q9P2H5 1018 aa16.95■□□□□ 0.3
LDLRAD4-203ENST00000399848 KANK1Q14678 1352 aa16.95■□□□□ 0.3
LDLRAD4-203ENST00000399848 KIF27Q86VH2 1401 aa16.95■□□□□ 0.3
LDLRAD4-203ENST00000399848 IPO8O15397 1037 aaKnown RBP16.95■□□□□ 0.3
LDLRAD4-203ENST00000399848 TPM4P67936 248 aa16.94■□□□□ 0.3
LDLRAD4-203ENST00000399848 CCDC34Q96HJ3 373 aa16.94■□□□□ 0.3
LDLRAD4-203ENST00000399848 GOLGA6L1Q8N7Z2 621 aa16.93■□□□□ 0.3
LDLRAD4-203ENST00000399848 FHAD1B1AJZ9 1412 aa16.92■□□□□ 0.3
LDLRAD4-203ENST00000399848 TNNT3P45378 269 aaPredicted RBP16.92■□□□□ 0.3
LDLRAD4-203ENST00000399848 G3V3G9 751 aa16.91■□□□□ 0.3
LDLRAD4-203ENST00000399848 DCAF8Q5TAQ9 597 aa16.91■□□□□ 0.3
LDLRAD4-203ENST00000399848 CALD1Q05682 793 aaKnown RBP16.91■□□□□ 0.3
LDLRAD4-203ENST00000399848 AMER1Q5JTC6 1135 aaPredicted RBP16.91■□□□□ 0.3
LDLRAD4-203ENST00000399848 SPRYD3Q8NCJ5 442 aa16.91■□□□□ 0.3
LDLRAD4-203ENST00000399848 NCBP3Q53F19 620 aaKnown RBP16.9■□□□□ 0.3
LDLRAD4-203ENST00000399848 RTF1Q92541 710 aaKnown RBP16.9■□□□□ 0.3
LDLRAD4-203ENST00000399848 CCER2I3L3R5 266 aa16.89■□□□□ 0.29
LDLRAD4-203ENST00000399848 CSPP1Q1MSJ5 1256 aa16.88■□□□□ 0.29
LDLRAD4-203ENST00000399848 ISY1Q9ULR0 285 aaKnown RBP16.88■□□□□ 0.29
LDLRAD4-203ENST00000399848 KTN1Q86UP2 1357 aaKnown RBP16.86■□□□□ 0.29
LDLRAD4-203ENST00000399848 CHMP4AQ9BY43 222 aa16.86■□□□□ 0.29
LDLRAD4-203ENST00000399848 PHF14O94880 888 aa16.86■□□□□ 0.29
LDLRAD4-203ENST00000399848 MORC1Q86VD1 984 aa16.85■□□□□ 0.29
LDLRAD4-203ENST00000399848 TNIKQ9UKE5 1360 aa16.85■□□□□ 0.29
LDLRAD4-203ENST00000399848 GPATCH3Q96I76 525 aa16.85■□□□□ 0.29
LDLRAD4-203ENST00000399848 WRNQ14191 1432 aaPredicted RBP eCLIP16.85■□□□□ 0.29
LDLRAD4-203ENST00000399848 TIMELESSQ9UNS1 1208 aa16.85■□□□□ 0.29
LDLRAD4-203ENST00000399848 RBM19Q9Y4C8 960 aaKnown RBP16.84■□□□□ 0.29
LDLRAD4-203ENST00000399848 CCNB3Q8WWL7 1395 aa16.84■□□□□ 0.29
LDLRAD4-203ENST00000399848 A0A0U1RQG5 324 aaPredicted RBP16.84■□□□□ 0.29
LDLRAD4-203ENST00000399848 RWDD1Q9H446 243 aaPredicted RBP16.83■□□□□ 0.29
LDLRAD4-203ENST00000399848 SRPK2P78362 688 aaKnown RBP16.83■□□□□ 0.29
LDLRAD4-203ENST00000399848 DCAF11Q8TEB1 546 aa16.83■□□□□ 0.28
LDLRAD4-203ENST00000399848 TCERG1O14776 1098 aaKnown RBP16.82■□□□□ 0.28
LDLRAD4-203ENST00000399848 BAZ1BQ9UIG0 1483 aaKnown RBP16.81■□□□□ 0.28
LDLRAD4-203ENST00000399848 GZF1Q9H116 711 aaPredicted RBP16.81■□□□□ 0.28
LDLRAD4-203ENST00000399848 GOLGA6L3A6NEY3 463 aa16.8■□□□□ 0.28
LDLRAD4-203ENST00000399848 MYO15BQ96JP2 1530 aa16.8■□□□□ 0.28
LDLRAD4-203ENST00000399848 MLECQ14165 292 aa16.8■□□□□ 0.28
LDLRAD4-203ENST00000399848 PMFBP1Q8TBY8 1022 aa16.79■□□□□ 0.28
LDLRAD4-203ENST00000399848 HDAC5Q9UQL6 1122 aa16.79■□□□□ 0.28
LDLRAD4-203ENST00000399848 SIN3AQ96ST3 1273 aa16.78■□□□□ 0.28
LDLRAD4-203ENST00000399848 RCAN3Q9UKA8 241 aa16.78■□□□□ 0.28
LDLRAD4-203ENST00000399848 ITPRIPQ8IWB1 547 aa16.77■□□□□ 0.27
LDLRAD4-203ENST00000399848 SLKQ9H2G2 1235 aaPredicted RBP16.76■□□□□ 0.27
LDLRAD4-203ENST00000399848 ARHGAP35Q9NRY4 1499 aa16.76■□□□□ 0.27
LDLRAD4-203ENST00000399848 SF3B2Q13435 895 aaKnown RBP16.75■□□□□ 0.27
LDLRAD4-203ENST00000399848 HDGFL2Q7Z4V5 671 aaPredicted RBP16.75■□□□□ 0.27
LDLRAD4-203ENST00000399848 APBB1O00213 710 aa16.75■□□□□ 0.27
LDLRAD4-203ENST00000399848 SPAG9O60271 1321 aaKnown RBP16.75■□□□□ 0.27
LDLRAD4-203ENST00000399848 RALBP1Q15311 655 aa16.74■□□□□ 0.27
LDLRAD4-203ENST00000399848 EID1Q9Y6B2 187 aa16.74■□□□□ 0.27
LDLRAD4-203ENST00000399848 ARID3AQ99856 593 aa16.74■□□□□ 0.27
LDLRAD4-203ENST00000399848 EIF3AQ14152 1382 aaKnown RBP16.74■□□□□ 0.27
LDLRAD4-203ENST00000399848 SETQ01105 290 aaPredicted RBP16.74■□□□□ 0.27
LDLRAD4-203ENST00000399848 KIF3AQ9Y496 699 aa16.73■□□□□ 0.27
LDLRAD4-203ENST00000399848 HMMRO75330 724 aa16.73■□□□□ 0.27
LDLRAD4-203ENST00000399848 EIF4G1Q04637 1599 aaKnown RBP16.73■□□□□ 0.27
LDLRAD4-203ENST00000399848 TPM3P06753 285 aa16.72■□□□□ 0.27
LDLRAD4-203ENST00000399848 HSP90B1P14625 803 aaKnown RBP16.72■□□□□ 0.27
LDLRAD4-203ENST00000399848 PRM3Q9NNZ6 103 aa16.72■□□□□ 0.27
LDLRAD4-203ENST00000399848 CEP89Q96ST8 783 aa16.71■□□□□ 0.27
LDLRAD4-203ENST00000399848 SOX12O15370 315 aa16.71■□□□□ 0.27
LDLRAD4-203ENST00000399848 SETD5Q9C0A6 1442 aa16.71■□□□□ 0.27
LDLRAD4-203ENST00000399848 GORABQ5T7V8 394 aa16.71■□□□□ 0.27
LDLRAD4-203ENST00000399848 ROCK2O75116 1388 aaKnown RBP16.7■□□□□ 0.26
LDLRAD4-203ENST00000399848 TRIM6-TRIM34B2RNG4 842 aa16.7■□□□□ 0.26
LDLRAD4-203ENST00000399848 ST18O60284 1047 aa16.7■□□□□ 0.26
LDLRAD4-203ENST00000399848 CSB-PGBD3P0DP91 1061 aa16.7■□□□□ 0.26
LDLRAD4-203ENST00000399848 RASSF8Q8NHQ8 419 aa16.7■□□□□ 0.26
LDLRAD4-203ENST00000399848 ANO8Q9HCE9 1232 aaPredicted RBP16.69■□□□□ 0.26
LDLRAD4-203ENST00000399848 NACADO15069 1562 aa16.69■□□□□ 0.26
LDLRAD4-203ENST00000399848 STK31Q9BXU1 1019 aa16.69■□□□□ 0.26
LDLRAD4-203ENST00000399848 IPO9Q96P70 1041 aaKnown RBP16.69■□□□□ 0.26
LDLRAD4-203ENST00000399848 DDX11L8A8MPP1 907 aa16.68■□□□□ 0.26
LDLRAD4-203ENST00000399848 KIF16BQ96L93 1317 aa16.68■□□□□ 0.26
LDLRAD4-203ENST00000399848 U2AF1L5P0DN76 240 aaPredicted RBP16.67■□□□□ 0.26
LDLRAD4-203ENST00000399848 U2AF1Q01081 240 aaKnown RBP eCLIP16.67■□□□□ 0.26
LDLRAD4-203ENST00000399848 MFAP1P55081 439 aaKnown RBP16.67■□□□□ 0.26
LDLRAD4-203ENST00000399848 TSR1Q2NL82 804 aaKnown RBP16.66■□□□□ 0.26
LDLRAD4-203ENST00000399848 PHLDB1Q86UU1 1377 aa16.66■□□□□ 0.26
LDLRAD4-203ENST00000399848 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.65■□□□□ 0.26
LDLRAD4-203ENST00000399848 TAF7LQ5H9L4 462 aa16.65■□□□□ 0.26
LDLRAD4-203ENST00000399848 HSP90AA2PQ14568 343 aaPredicted RBP16.64■□□□□ 0.25
LDLRAD4-203ENST00000399848 CHMP4CQ96CF2 233 aa16.64■□□□□ 0.25
LDLRAD4-203ENST00000399848 SMC4Q9NTJ3 1288 aa16.64■□□□□ 0.25
LDLRAD4-203ENST00000399848 CCDC70Q6NSX1 233 aa16.63■□□□□ 0.25
LDLRAD4-203ENST00000399848 WASHC2AQ641Q2 1341 aa16.63■□□□□ 0.25
LDLRAD4-203ENST00000399848 CWC22Q9HCG8 908 aaKnown RBP16.63■□□□□ 0.25
LDLRAD4-203ENST00000399848 RSPH6AQ9H0K4 717 aa16.63■□□□□ 0.25
LDLRAD4-203ENST00000399848 GPS2Q13227 327 aa16.63■□□□□ 0.25
LDLRAD4-203ENST00000399848 MSH5O43196 834 aa16.63■□□□□ 0.25
LDLRAD4-203ENST00000399848 CHMP3Q9Y3E7 222 aa16.62■□□□□ 0.25
LDLRAD4-203ENST00000399848 ATP6V1DQ9Y5K8 247 aa16.62■□□□□ 0.25
LDLRAD4-203ENST00000399848 SAFB2Q14151 953 aaKnown RBP eCLIP16.62■□□□□ 0.25
LDLRAD4-203ENST00000399848 HSPA5P11021 654 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms