RNA–Protein interactions for RNA: ENST00000399753.2

MSRB1-202, Transcript of methionine sulfoxide reductase B1, humanhuman

TSL 3 BASIC

Gene MSRB1, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB1-202ENST00000399753 ATP1B4Q9UN42 357 aaPredicted RBP28.44■■■□□ 2.14
MSRB1-202ENST00000399753 UBTFP17480 764 aaKnown RBP28.43■■■□□ 2.14
MSRB1-202ENST00000399753 MLECQ14165 292 aa28.43■■■□□ 2.14
MSRB1-202ENST00000399753 FMN1Q68DA7 1419 aa28.43■■■□□ 2.14
MSRB1-202ENST00000399753 EFCAB2Q5VUJ9 269 aa28.41■■■□□ 2.14
MSRB1-202ENST00000399753 EHMT2Q96KQ7 1210 aa28.41■■■□□ 2.14
MSRB1-202ENST00000399753 CDK11AQ9UQ88 783 aaPredicted RBP28.39■■■□□ 2.14
MSRB1-202ENST00000399753 ARHGAP35Q9NRY4 1499 aa28.38■■■□□ 2.13
MSRB1-202ENST00000399753 ATP10AO60312 1499 aa28.37■■■□□ 2.13
MSRB1-202ENST00000399753 FER1L4A9Z1Z3 1794 aa28.34■■■□□ 2.13
MSRB1-202ENST00000399753 MYO5CQ9NQX4 1742 aa28.33■■■□□ 2.13
MSRB1-202ENST00000399753 C9orf84Q5VXU9 1444 aa28.33■■■□□ 2.13
MSRB1-202ENST00000399753 ARHGEF12Q9NZN5 1544 aa28.32■■■□□ 2.12
MSRB1-202ENST00000399753 KIF14Q15058 1648 aa28.3■■■□□ 2.12
MSRB1-202ENST00000399753 TROQ12816 1431 aaPredicted RBP28.3■■■□□ 2.12
MSRB1-202ENST00000399753 ZNF518AQ6AHZ1 1483 aa28.27■■■□□ 2.12
MSRB1-202ENST00000399753 AFAP1Q8N556 730 aa28.26■■■□□ 2.11
MSRB1-202ENST00000399753 ARHGAP5Q13017 1502 aa28.25■■■□□ 2.11
MSRB1-202ENST00000399753 CLIP1P30622 1438 aa28.25■■■□□ 2.11
MSRB1-202ENST00000399753 CEBPAP49715 358 aaPredicted RBP28.23■■■□□ 2.11
MSRB1-202ENST00000399753 KDM5CP41229 1560 aa28.22■■■□□ 2.11
MSRB1-202ENST00000399753 CERKQ8TCT0 537 aa28.22■■■□□ 2.11
MSRB1-202ENST00000399753 CHIC1Q5VXU3 224 aa28.19■■■□□ 2.1
MSRB1-202ENST00000399753 MYT1LQ9UL68 1186 aa28.18■■■□□ 2.1
MSRB1-202ENST00000399753 PREX1Q8TCU6 1659 aa28.17■■■□□ 2.1
MSRB1-202ENST00000399753 LRRIQ1Q96JM4 1722 aa28.16■■■□□ 2.1
MSRB1-202ENST00000399753 DIP2CQ9Y2E4 1556 aa28.15■■■□□ 2.1
MSRB1-202ENST00000399753 MLH3Q9UHC1 1453 aa28.13■■■□□ 2.09
MSRB1-202ENST00000399753 REREQ9P2R6 1566 aa28.12■■■□□ 2.09
MSRB1-202ENST00000399753 CDC42BPBQ9Y5S2 1711 aa28.12■■■□□ 2.09
MSRB1-202ENST00000399753 UHRF1BP1Q6BDS2 1440 aa28.09■■■□□ 2.09
MSRB1-202ENST00000399753 TRAPPC8Q9Y2L5 1435 aa28.09■■■□□ 2.09
MSRB1-202ENST00000399753 CASKIN1Q8WXD9 1431 aa28.09■■■□□ 2.09
MSRB1-202ENST00000399753 ABCA6Q8N139 1617 aa28.08■■■□□ 2.09
MSRB1-202ENST00000399753 DMRT2Q9Y5R5 561 aa28.08■■■□□ 2.09
MSRB1-202ENST00000399753 CCDC18Q5T9S5 1454 aa28.08■■■□□ 2.09
MSRB1-202ENST00000399753 PREX2Q70Z35 1606 aa28.07■■■□□ 2.08
MSRB1-202ENST00000399753 ABCC1P33527 1531 aa28.07■■■□□ 2.08
MSRB1-202ENST00000399753 SETD1BQ9UPS6 1966 aaKnown RBP28.06■■■□□ 2.08
MSRB1-202ENST00000399753 AGLP35573 1532 aa28.04■■■□□ 2.08
MSRB1-202ENST00000399753 STRCQ7RTU9 1775 aa28.04■■■□□ 2.08
MSRB1-202ENST00000399753 ESF1Q9H501 851 aaKnown RBP28.01■■■□□ 2.07
MSRB1-202ENST00000399753 ITSN2Q9NZM3 1697 aa28■■■□□ 2.07
MSRB1-202ENST00000399753 C3P01024 1663 aa27.99■■■□□ 2.07
MSRB1-202ENST00000399753 KIDINS220Q9ULH0 1771 aa27.96■■■□□ 2.07
MSRB1-202ENST00000399753 CDC42BPAQ5VT25 1732 aa27.95■■■□□ 2.06
MSRB1-202ENST00000399753 FYCO1Q9BQS8 1478 aa27.95■■■□□ 2.06
MSRB1-202ENST00000399753 PTPRTO14522 1441 aa27.93■■■□□ 2.06
MSRB1-202ENST00000399753 CNTLNQ9NXG0 1405 aa27.93■■■□□ 2.06
MSRB1-202ENST00000399753 ZNF777Q9ULD5 760 aaPredicted RBP27.92■■■□□ 2.06
MSRB1-202ENST00000399753 SAMD9LQ8IVG5 1584 aa27.9■■■□□ 2.06
MSRB1-202ENST00000399753 GPATCH8Q9UKJ3 1502 aaKnown RBP27.88■■■□□ 2.05
MSRB1-202ENST00000399753 SPAG9O60271 1321 aaKnown RBP27.87■■■□□ 2.05
MSRB1-202ENST00000399753 HNRNPMP52272 730 aaKnown RBP eCLIP27.86■■■□□ 2.05
MSRB1-202ENST00000399753 SYCP2Q9BX26 1530 aa27.86■■■□□ 2.05
MSRB1-202ENST00000399753 NPATQ14207 1427 aa27.83■■■□□ 2.05
MSRB1-202ENST00000399753 NCOA1Q15788 1441 aa27.83■■■□□ 2.05
MSRB1-202ENST00000399753 ZMYM3Q14202 1370 aa27.82■■■□□ 2.04
MSRB1-202ENST00000399753 KIAA1107Q9UPP5 1409 aa27.81■■■□□ 2.04
MSRB1-202ENST00000399753 CFDP1Q9UEE9 299 aaPredicted RBP27.8■■■□□ 2.04
MSRB1-202ENST00000399753 MROH2AA6NES4 1674 aa27.79■■■□□ 2.04
MSRB1-202ENST00000399753 LTBP4Q8N2S1 1624 aa27.79■■■□□ 2.04
MSRB1-202ENST00000399753 ATP7AQ04656 1500 aa27.77■■■□□ 2.04
MSRB1-202ENST00000399753 PLEKHH2Q8IVE3 1493 aa27.77■■■□□ 2.04
MSRB1-202ENST00000399753 CCNB3Q8WWL7 1395 aa27.76■■■□□ 2.03
MSRB1-202ENST00000399753 DISP3Q9P2K9 1392 aa27.76■■■□□ 2.03
MSRB1-202ENST00000399753 SUPT6HQ7KZ85 1726 aaKnown RBP27.75■■■□□ 2.03
MSRB1-202ENST00000399753 CAMSAP1Q5T5Y3 1602 aa27.74■■■□□ 2.03
MSRB1-202ENST00000399753 A2MP01023 1474 aa27.74■■■□□ 2.03
MSRB1-202ENST00000399753 PLXNC1O60486 1568 aa27.73■■■□□ 2.03
MSRB1-202ENST00000399753 INO80Q9ULG1 1556 aaPredicted RBP27.73■■■□□ 2.03
MSRB1-202ENST00000399753 MTUS2Q5JR59 1369 aa27.72■■■□□ 2.03
MSRB1-202ENST00000399753 IQSEC2Q5JU85 1478 aa27.71■■■□□ 2.03
MSRB1-202ENST00000399753 GGT6Q6P531 493 aa27.69■■■□□ 2.02
MSRB1-202ENST00000399753 ILDR2Q71H61 639 aa27.69■■■□□ 2.02
MSRB1-202ENST00000399753 CLTCQ00610 1675 aaKnown RBP27.68■■■□□ 2.02
MSRB1-202ENST00000399753 NCKAP5LQ9HCH0 1330 aa27.68■■■□□ 2.02
MSRB1-202ENST00000399753 PTPRKQ15262 1439 aa27.67■■■□□ 2.02
MSRB1-202ENST00000399753 ZNF644Q9H582 1327 aaPredicted RBP27.66■■■□□ 2.02
MSRB1-202ENST00000399753 PPP6R1Q9UPN7 881 aa27.65■■■□□ 2.02
MSRB1-202ENST00000399753 PKD2Q13563 968 aa27.63■■■□□ 2.01
MSRB1-202ENST00000399753 PLA2R1Q13018 1463 aa27.63■■■□□ 2.01
MSRB1-202ENST00000399753 MYO3AQ8NEV4 1616 aa27.63■■■□□ 2.01
MSRB1-202ENST00000399753 ZNF142P52746 1687 aaPredicted RBP27.62■■■□□ 2.01
MSRB1-202ENST00000399753 MBD5Q9P267 1494 aa27.61■■■□□ 2.01
MSRB1-202ENST00000399753 ZNF335Q9H4Z2 1342 aaPredicted RBP27.61■■■□□ 2.01
MSRB1-202ENST00000399753 TIAM1Q13009 1591 aa27.6■■■□□ 2.01
MSRB1-202ENST00000399753 CEP170BQ9Y4F5 1589 aaPredicted RBP27.6■■■□□ 2.01
MSRB1-202ENST00000399753 ADGBQ8N7X0 1667 aa27.59■■■□□ 2.01
MSRB1-202ENST00000399753 TCOF1Q13428 1488 aaKnown RBP27.58■■■□□ 2.01
MSRB1-202ENST00000399753 SOCS7O14512 581 aa27.57■■■□□ 2
MSRB1-202ENST00000399753 RTEL1-TNFRSF6BF6WH68 1400 aa27.57■■■□□ 2
MSRB1-202ENST00000399753 EHBP1L1Q8N3D4 1523 aa27.57■■■□□ 2
MSRB1-202ENST00000399753 SPATA31D1Q6ZQQ2 1576 aa27.56■■■□□ 2
MSRB1-202ENST00000399753 CEP162Q5TB80 1403 aa27.55■■■□□ 2
MSRB1-202ENST00000399753 DHX29Q7Z478 1369 aaKnown RBP27.54■■■□□ 2
MSRB1-202ENST00000399753 UBAP1LF5GYI3 381 aa27.52■■■□□ 2
MSRB1-202ENST00000399753 A2ML1A8K2U0 1454 aa27.51■■□□□ 1.99
MSRB1-202ENST00000399753 KIF3BO15066 747 aa27.47■■□□□ 1.99
MSRB1-202ENST00000399753 DNMT1P26358 1616 aaKnown RBP27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms