RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.3□□□□□ -0.12
LAMA3-203ENST00000399516 TSHZ2Q9NRE2 1034 aa14.3□□□□□ -0.12
LAMA3-203ENST00000399516 TCERG1O14776 1098 aaKnown RBP14.29□□□□□ -0.12
LAMA3-203ENST00000399516 TULP1O00294 542 aaPredicted RBP14.28□□□□□ -0.12
LAMA3-203ENST00000399516 SLKQ9H2G2 1235 aaPredicted RBP14.28□□□□□ -0.12
LAMA3-203ENST00000399516 KIAA2012Q0VF49 1180 aa14.28□□□□□ -0.12
LAMA3-203ENST00000399516 DCAF11Q8TEB1 546 aa14.28□□□□□ -0.12
LAMA3-203ENST00000399516 GZF1Q9H116 711 aaPredicted RBP14.28□□□□□ -0.12
LAMA3-203ENST00000399516 AMER1Q5JTC6 1135 aaPredicted RBP14.27□□□□□ -0.12
LAMA3-203ENST00000399516 RCAN3Q9UKA8 241 aa14.27□□□□□ -0.12
LAMA3-203ENST00000399516 IPO9Q96P70 1041 aaKnown RBP14.27□□□□□ -0.12
LAMA3-203ENST00000399516 KANK1Q14678 1352 aa14.27□□□□□ -0.13
LAMA3-203ENST00000399516 ARID3AQ99856 593 aa14.26□□□□□ -0.13
LAMA3-203ENST00000399516 SOGA1O94964 1423 aa14.26□□□□□ -0.13
LAMA3-203ENST00000399516 GOLGA6L3A6NEY3 463 aa14.26□□□□□ -0.13
LAMA3-203ENST00000399516 MORC1Q86VD1 984 aa14.25□□□□□ -0.13
LAMA3-203ENST00000399516 ABCC8Q09428 1581 aa14.24□□□□□ -0.13
LAMA3-203ENST00000399516 HAP1P54257 671 aaPredicted RBP14.24□□□□□ -0.13
LAMA3-203ENST00000399516 SYAP1Q96A49 352 aaPredicted RBP14.23□□□□□ -0.13
LAMA3-203ENST00000399516 ROCK2O75116 1388 aaKnown RBP14.23□□□□□ -0.13
LAMA3-203ENST00000399516 RALBP1Q15311 655 aa14.23□□□□□ -0.13
LAMA3-203ENST00000399516 RWDD1Q9H446 243 aaPredicted RBP14.22□□□□□ -0.13
LAMA3-203ENST00000399516 ITPRIPQ8IWB1 547 aa14.22□□□□□ -0.13
LAMA3-203ENST00000399516 RAB3GAP2Q9H2M9 1393 aa14.22□□□□□ -0.13
LAMA3-203ENST00000399516 IPO8O15397 1037 aaKnown RBP14.22□□□□□ -0.13
LAMA3-203ENST00000399516 GNL2Q13823 731 aaKnown RBP14.2□□□□□ -0.14
LAMA3-203ENST00000399516 EIF3AQ14152 1382 aaKnown RBP14.19□□□□□ -0.14
LAMA3-203ENST00000399516 CUX2O14529 1486 aa14.19□□□□□ -0.14
LAMA3-203ENST00000399516 KIAA1211Q6ZU35 1233 aa14.19□□□□□ -0.14
LAMA3-203ENST00000399516 GOLGA2Q08379 1002 aa14.18□□□□□ -0.14
LAMA3-203ENST00000399516 MFAP1P55081 439 aaKnown RBP14.17□□□□□ -0.14
LAMA3-203ENST00000399516 APBB1O00213 710 aa14.17□□□□□ -0.14
LAMA3-203ENST00000399516 CARMIL1Q5VZK9 1371 aa14.16□□□□□ -0.14
LAMA3-203ENST00000399516 SRPK2P78362 688 aaKnown RBP14.16□□□□□ -0.14
LAMA3-203ENST00000399516 PMFBP1Q8TBY8 1022 aa14.15□□□□□ -0.14
LAMA3-203ENST00000399516 HTATSF1O43719 755 aaKnown RBP14.15□□□□□ -0.15
LAMA3-203ENST00000399516 NPHP1O15259 732 aa14.14□□□□□ -0.15
LAMA3-203ENST00000399516 RSPH6AQ9H0K4 717 aa14.14□□□□□ -0.15
LAMA3-203ENST00000399516 LMOD2Q6P5Q4 547 aa14.14□□□□□ -0.15
LAMA3-203ENST00000399516 CALD1Q05682 793 aaKnown RBP14.14□□□□□ -0.15
LAMA3-203ENST00000399516 FOXD1Q16676 465 aa14.13□□□□□ -0.15
LAMA3-203ENST00000399516 PKD2Q13563 968 aa14.13□□□□□ -0.15
LAMA3-203ENST00000399516 USP35Q9P2H5 1018 aa14.12□□□□□ -0.15
LAMA3-203ENST00000399516 FMN1Q68DA7 1419 aa14.12□□□□□ -0.15
LAMA3-203ENST00000399516 CLSTN1O94985 981 aa14.12□□□□□ -0.15
LAMA3-203ENST00000399516 DDX11L8A8MPP1 907 aa14.11□□□□□ -0.15
LAMA3-203ENST00000399516 RTF1Q92541 710 aaKnown RBP14.11□□□□□ -0.15
LAMA3-203ENST00000399516 TNNT3P45378 269 aaPredicted RBP14.11□□□□□ -0.15
LAMA3-203ENST00000399516 PHF14O94880 888 aa14.11□□□□□ -0.15
LAMA3-203ENST00000399516 KANK4Q5T7N3 995 aaPredicted RBP14.1□□□□□ -0.15
LAMA3-203ENST00000399516 ERCC6Q03468 1493 aa14.1□□□□□ -0.15
LAMA3-203ENST00000399516 NOC3LQ8WTT2 800 aaKnown RBP14.1□□□□□ -0.15
LAMA3-203ENST00000399516 TPM4P67936 248 aa14.1□□□□□ -0.15
LAMA3-203ENST00000399516 HSP90AA2PQ14568 343 aaPredicted RBP14.09□□□□□ -0.15
LAMA3-203ENST00000399516 PHLDB1Q86UU1 1377 aa14.09□□□□□ -0.15
LAMA3-203ENST00000399516 U2AF1L5P0DN76 240 aaPredicted RBP14.09□□□□□ -0.15
LAMA3-203ENST00000399516 U2AF1Q01081 240 aaKnown RBP eCLIP14.09□□□□□ -0.15
LAMA3-203ENST00000399516 SAFB2Q14151 953 aaKnown RBP eCLIP14.09□□□□□ -0.15
LAMA3-203ENST00000399516 CCDC88BA6NC98 1476 aa14.08□□□□□ -0.15
LAMA3-203ENST00000399516 CSPP1Q1MSJ5 1256 aa14.08□□□□□ -0.16
LAMA3-203ENST00000399516 CENPJQ9HC77 1338 aaPredicted RBP14.08□□□□□ -0.16
LAMA3-203ENST00000399516 CECR2Q9BXF3 1484 aa14.08□□□□□ -0.16
LAMA3-203ENST00000399516 HDGFL2Q7Z4V5 671 aaPredicted RBP14.07□□□□□ -0.16
LAMA3-203ENST00000399516 KIF15Q9NS87 1388 aa14.07□□□□□ -0.16
LAMA3-203ENST00000399516 PDE3BQ13370 1112 aa14.07□□□□□ -0.16
LAMA3-203ENST00000399516 SOX12O15370 315 aa14.07□□□□□ -0.16
LAMA3-203ENST00000399516 GPATCH3Q96I76 525 aa14.07□□□□□ -0.16
LAMA3-203ENST00000399516 SMC4Q9NTJ3 1288 aa14.07□□□□□ -0.16
LAMA3-203ENST00000399516 GOLGA6L1Q8N7Z2 621 aa14.06□□□□□ -0.16
LAMA3-203ENST00000399516 FOXD4L1Q9NU39 408 aa14.06□□□□□ -0.16
LAMA3-203ENST00000399516 HSP90B1P14625 803 aaKnown RBP14.05□□□□□ -0.16
LAMA3-203ENST00000399516 MPHOSPH9Q99550 1183 aa14.05□□□□□ -0.16
LAMA3-203ENST00000399516 ANKRD30AQ9BXX3 1397 aa14.04□□□□□ -0.16
LAMA3-203ENST00000399516 NUP155O75694 1391 aa14.04□□□□□ -0.16
LAMA3-203ENST00000399516 NLRP13Q86W25 1043 aa14.04□□□□□ -0.16
LAMA3-203ENST00000399516 HMMRO75330 724 aa14.04□□□□□ -0.16
LAMA3-203ENST00000399516 ST18O60284 1047 aa14.03□□□□□ -0.16
LAMA3-203ENST00000399516 GSE1Q14687 1217 aa14.03□□□□□ -0.16
LAMA3-203ENST00000399516 TRIM6-TRIM34B2RNG4 842 aa14.03□□□□□ -0.16
LAMA3-203ENST00000399516 NOL8Q76FK4 1167 aaKnown RBP14.02□□□□□ -0.16
LAMA3-203ENST00000399516 CCDC146Q8IYE0 955 aa14.02□□□□□ -0.17
LAMA3-203ENST00000399516 CENPQQ7L2Z9 268 aaPredicted RBP14.01□□□□□ -0.17
LAMA3-203ENST00000399516 MYBBP1AQ9BQG0 1328 aaKnown RBP14.01□□□□□ -0.17
LAMA3-203ENST00000399516 FAM161AQ3B820 660 aa14.01□□□□□ -0.17
LAMA3-203ENST00000399516 SPAG9O60271 1321 aaKnown RBP14.01□□□□□ -0.17
LAMA3-203ENST00000399516 ZBED9Q6R2W3 1325 aa14.01□□□□□ -0.17
LAMA3-203ENST00000399516 FANCIQ9NVI1 1328 aa14□□□□□ -0.17
LAMA3-203ENST00000399516 STK31Q9BXU1 1019 aa14□□□□□ -0.17
LAMA3-203ENST00000399516 ISY1Q9ULR0 285 aaKnown RBP14□□□□□ -0.17
LAMA3-203ENST00000399516 TOP2AP11388 1531 aaKnown RBP14□□□□□ -0.17
LAMA3-203ENST00000399516 PDE4AP27815 886 aa13.99□□□□□ -0.17
LAMA3-203ENST00000399516 CCDC34Q96HJ3 373 aa13.99□□□□□ -0.17
LAMA3-203ENST00000399516 KIF16BQ96L93 1317 aa13.99□□□□□ -0.17
LAMA3-203ENST00000399516 SMARCA2P51531 1590 aa13.99□□□□□ -0.17
LAMA3-203ENST00000399516 MROH2BQ7Z745 1585 aa13.99□□□□□ -0.17
LAMA3-203ENST00000399516 CLUAP1Q96AJ1 413 aa13.99□□□□□ -0.17
LAMA3-203ENST00000399516 WIZO95785 1651 aa13.98□□□□□ -0.17
LAMA3-203ENST00000399516 STK26Q9P289 416 aa13.98□□□□□ -0.17
LAMA3-203ENST00000399516 HDGFP51858 240 aaKnown RBP13.98□□□□□ -0.17
LAMA3-203ENST00000399516 SKOR2Q2VWA4 1001 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms