RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 FHAD1B1AJZ9 1412 aa16.85■□□□□ 0.29
ITSN1-208ENST00000399349 HSCBQ8IWL3 235 aa16.85■□□□□ 0.29
ITSN1-208ENST00000399349 SETD5Q9C0A6 1442 aa16.84■□□□□ 0.29
ITSN1-208ENST00000399349 CHMP4BQ9H444 224 aaKnown RBP16.83■□□□□ 0.29
ITSN1-208ENST00000399349 TIMELESSQ9UNS1 1208 aa16.82■□□□□ 0.28
ITSN1-208ENST00000399349 GOLGA6L4A6NEF3 574 aa16.8■□□□□ 0.28
ITSN1-208ENST00000399349 SLKQ9H2G2 1235 aaPredicted RBP16.8■□□□□ 0.28
ITSN1-208ENST00000399349 U2AF1L5P0DN76 240 aaPredicted RBP16.8■□□□□ 0.28
ITSN1-208ENST00000399349 U2AF1Q01081 240 aaKnown RBP eCLIP16.8■□□□□ 0.28
ITSN1-208ENST00000399349 ERCC6Q03468 1493 aa16.8■□□□□ 0.28
ITSN1-208ENST00000399349 PNNQ9H307 717 aaKnown RBP16.79■□□□□ 0.28
ITSN1-208ENST00000399349 RCAN3Q9UKA8 241 aa16.79■□□□□ 0.28
ITSN1-208ENST00000399349 RAB3GAP2Q9H2M9 1393 aa16.77■□□□□ 0.28
ITSN1-208ENST00000399349 MPHOSPH9Q99550 1183 aa16.77■□□□□ 0.28
ITSN1-208ENST00000399349 GZF1Q9H116 711 aaPredicted RBP16.77■□□□□ 0.28
ITSN1-208ENST00000399349 KTN1Q86UP2 1357 aaKnown RBP16.77■□□□□ 0.28
ITSN1-208ENST00000399349 VPS8Q8N3P4 1428 aa16.77■□□□□ 0.27
ITSN1-208ENST00000399349 GOLGA2Q08379 1002 aa16.76■□□□□ 0.27
ITSN1-208ENST00000399349 KANK1Q14678 1352 aa16.76■□□□□ 0.27
ITSN1-208ENST00000399349 RTF1Q92541 710 aaKnown RBP16.74■□□□□ 0.27
ITSN1-208ENST00000399349 ITPRIPQ8IWB1 547 aa16.74■□□□□ 0.27
ITSN1-208ENST00000399349 CLUAP1Q96AJ1 413 aa16.74■□□□□ 0.27
ITSN1-208ENST00000399349 ARHGAP35Q9NRY4 1499 aa16.73■□□□□ 0.27
ITSN1-208ENST00000399349 NUP155O75694 1391 aa16.73■□□□□ 0.27
ITSN1-208ENST00000399349 ABCC8Q09428 1581 aa16.72■□□□□ 0.27
ITSN1-208ENST00000399349 ROCK2O75116 1388 aaKnown RBP16.72■□□□□ 0.27
ITSN1-208ENST00000399349 TRHP20396 242 aaPredicted RBP16.72■□□□□ 0.27
ITSN1-208ENST00000399349 PAK3O75914 559 aaPredicted RBP16.71■□□□□ 0.27
ITSN1-208ENST00000399349 L3MBTL2Q969R5 705 aa16.71■□□□□ 0.27
ITSN1-208ENST00000399349 BAZ1AQ9NRL2 1556 aaPredicted RBP16.71■□□□□ 0.27
ITSN1-208ENST00000399349 ZNF330Q9Y3S2 320 aaPredicted RBP16.71■□□□□ 0.27
ITSN1-208ENST00000399349 CCDC146Q8IYE0 955 aa16.7■□□□□ 0.26
ITSN1-208ENST00000399349 NUTM2DQ5VT03 806 aaPredicted RBP16.7■□□□□ 0.26
ITSN1-208ENST00000399349 MCCP23508 829 aa16.7■□□□□ 0.26
ITSN1-208ENST00000399349 HDGFL2Q7Z4V5 671 aaPredicted RBP16.69■□□□□ 0.26
ITSN1-208ENST00000399349 CCDC88BA6NC98 1476 aa16.69■□□□□ 0.26
ITSN1-208ENST00000399349 MSNP26038 577 aaKnown RBP16.69■□□□□ 0.26
ITSN1-208ENST00000399349 TDRD9Q8NDG6 1382 aaKnown RBP16.68■□□□□ 0.26
ITSN1-208ENST00000399349 IPO8O15397 1037 aaKnown RBP16.68■□□□□ 0.26
ITSN1-208ENST00000399349 DRC7Q8IY82 874 aa16.67■□□□□ 0.26
ITSN1-208ENST00000399349 NACADO15069 1562 aa16.67■□□□□ 0.26
ITSN1-208ENST00000399349 GOLGA6L6A8MZA4 724 aa16.67■□□□□ 0.26
ITSN1-208ENST00000399349 NRDCO43847 1150 aa16.66■□□□□ 0.26
ITSN1-208ENST00000399349 MFAP1P55081 439 aaKnown RBP16.66■□□□□ 0.26
ITSN1-208ENST00000399349 ARID3AQ99856 593 aa16.66■□□□□ 0.26
ITSN1-208ENST00000399349 L1TD1Q5T7N2 865 aaKnown RBP16.65■□□□□ 0.26
ITSN1-208ENST00000399349 RWDD1Q9H446 243 aaPredicted RBP16.65■□□□□ 0.26
ITSN1-208ENST00000399349 ISY1Q9ULR0 285 aaKnown RBP16.65■□□□□ 0.26
ITSN1-208ENST00000399349 RALBP1Q15311 655 aa16.65■□□□□ 0.26
ITSN1-208ENST00000399349 HDGFP51858 240 aaKnown RBP16.65■□□□□ 0.26
ITSN1-208ENST00000399349 KIAA1211Q6ZU35 1233 aa16.64■□□□□ 0.25
ITSN1-208ENST00000399349 SMC4Q9NTJ3 1288 aa16.64■□□□□ 0.25
ITSN1-208ENST00000399349 HNRNPMP52272 730 aaKnown RBP eCLIP16.63■□□□□ 0.25
ITSN1-208ENST00000399349 TCERG1O14776 1098 aaKnown RBP16.63■□□□□ 0.25
ITSN1-208ENST00000399349 KIF3BO15066 747 aa16.63■□□□□ 0.25
ITSN1-208ENST00000399349 CHAF1AQ13111 956 aaPredicted RBP16.62■□□□□ 0.25
ITSN1-208ENST00000399349 FOXD4L1Q9NU39 408 aa16.62■□□□□ 0.25
ITSN1-208ENST00000399349 NUTM2FA1L443 756 aa16.62■□□□□ 0.25
ITSN1-208ENST00000399349 PRKCSHP14314 528 aaPredicted RBP16.6■□□□□ 0.25
ITSN1-208ENST00000399349 NOL8Q76FK4 1167 aaKnown RBP16.6■□□□□ 0.25
ITSN1-208ENST00000399349 CSB-PGBD3P0DP91 1061 aa16.6■□□□□ 0.25
ITSN1-208ENST00000399349 AMER1Q5JTC6 1135 aaPredicted RBP16.6■□□□□ 0.25
ITSN1-208ENST00000399349 SLC4A10Q6U841 1118 aa16.6■□□□□ 0.25
ITSN1-208ENST00000399349 GNL2Q13823 731 aaKnown RBP16.6■□□□□ 0.25
ITSN1-208ENST00000399349 RRP7AQ9Y3A4 280 aaKnown RBP16.6■□□□□ 0.25
ITSN1-208ENST00000399349 EFCAB2Q5VUJ9 269 aa16.59■□□□□ 0.25
ITSN1-208ENST00000399349 GBP4Q96PP9 640 aa16.59■□□□□ 0.25
ITSN1-208ENST00000399349 FANCIQ9NVI1 1328 aa16.58■□□□□ 0.24
ITSN1-208ENST00000399349 NLRP13Q86W25 1043 aa16.57■□□□□ 0.24
ITSN1-208ENST00000399349 MROH2BQ7Z745 1585 aa16.57■□□□□ 0.24
ITSN1-208ENST00000399349 IPO9Q96P70 1041 aaKnown RBP16.57■□□□□ 0.24
ITSN1-208ENST00000399349 TRIM6-TRIM34B2RNG4 842 aa16.57■□□□□ 0.24
ITSN1-208ENST00000399349 BCL2L13Q9BXK5 485 aa16.57■□□□□ 0.24
ITSN1-208ENST00000399349 CLSTN1O94985 981 aa16.56■□□□□ 0.24
ITSN1-208ENST00000399349 ANKRD30AQ9BXX3 1397 aa16.56■□□□□ 0.24
ITSN1-208ENST00000399349 NCBP3Q53F19 620 aaKnown RBP16.56■□□□□ 0.24
ITSN1-208ENST00000399349 ANO8Q9HCE9 1232 aaPredicted RBP16.56■□□□□ 0.24
ITSN1-208ENST00000399349 PLIN1O60240 522 aa16.55■□□□□ 0.24
ITSN1-208ENST00000399349 ST20-MTHFSA0A0A6YYL1 179 aa16.55■□□□□ 0.24
ITSN1-208ENST00000399349 STK31Q9BXU1 1019 aa16.55■□□□□ 0.24
ITSN1-208ENST00000399349 ELL2O00472 640 aaPredicted RBP16.55■□□□□ 0.24
ITSN1-208ENST00000399349 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.55■□□□□ 0.24
ITSN1-208ENST00000399349 TRAK1Q9UPV9 953 aa16.55■□□□□ 0.24
ITSN1-208ENST00000399349 CHMP3Q9Y3E7 222 aa16.55■□□□□ 0.24
ITSN1-208ENST00000399349 FMN1Q68DA7 1419 aa16.54■□□□□ 0.24
ITSN1-208ENST00000399349 CALD1Q05682 793 aaKnown RBP16.54■□□□□ 0.24
ITSN1-208ENST00000399349 LTV1Q96GA3 475 aaPredicted RBP16.54■□□□□ 0.24
ITSN1-208ENST00000399349 FHOD3Q2V2M9 1422 aa16.54■□□□□ 0.24
ITSN1-208ENST00000399349 SLC4A3P48751 1232 aa16.53■□□□□ 0.24
ITSN1-208ENST00000399349 CENPJQ9HC77 1338 aaPredicted RBP16.53■□□□□ 0.24
ITSN1-208ENST00000399349 PMFBP1Q8TBY8 1022 aa16.53■□□□□ 0.24
ITSN1-208ENST00000399349 CFAP44Q96MT7 982 aa16.52■□□□□ 0.24
ITSN1-208ENST00000399349 CARMIL2Q6F5E8 1435 aa16.52■□□□□ 0.24
ITSN1-208ENST00000399349 FOXD4L5Q5VV16 416 aaPredicted RBP16.52■□□□□ 0.23
ITSN1-208ENST00000399349 FOXD4L4Q8WXT5 416 aaPredicted RBP16.52■□□□□ 0.23
ITSN1-208ENST00000399349 SPAG9O60271 1321 aaKnown RBP16.5■□□□□ 0.23
ITSN1-208ENST00000399349 GORABQ5T7V8 394 aa16.5■□□□□ 0.23
ITSN1-208ENST00000399349 TERF2IPQ9NYB0 399 aa16.5■□□□□ 0.23
ITSN1-208ENST00000399349 KIAA2012Q0VF49 1180 aa16.49■□□□□ 0.23
ITSN1-208ENST00000399349 PANK3Q9H999 370 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms