RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 DAPK1P53355 1430 aa20.31■□□□□ 0.84
CCDC144A-205ENST00000399264 ZNF777Q9ULD5 760 aaPredicted RBP20.3■□□□□ 0.84
CCDC144A-205ENST00000399264 PRG4Q92954 1404 aaPredicted RBP20.3■□□□□ 0.84
CCDC144A-205ENST00000399264 SLC4A1APQ9BWU0 796 aaKnown RBP20.29■□□□□ 0.84
CCDC144A-205ENST00000399264 KIAA0586Q9BVV6 1533 aa20.28■□□□□ 0.84
CCDC144A-205ENST00000399264 IRX6P78412 446 aaPredicted RBP20.28■□□□□ 0.84
CCDC144A-205ENST00000399264 KIAA0556O60303 1618 aa20.27■□□□□ 0.84
CCDC144A-205ENST00000399264 AKNAQ7Z591 1439 aa20.27■□□□□ 0.84
CCDC144A-205ENST00000399264 IFT140Q96RY7 1462 aa20.27■□□□□ 0.84
CCDC144A-205ENST00000399264 ANKRD30BQ9BXX2 1392 aa20.27■□□□□ 0.84
CCDC144A-205ENST00000399264 NEFLP07196 543 aa20.26■□□□□ 0.83
CCDC144A-205ENST00000399264 GRIN2AQ12879 1464 aa20.24■□□□□ 0.83
CCDC144A-205ENST00000399264 CNGB1Q14028 1251 aaPredicted RBP20.24■□□□□ 0.83
CCDC144A-205ENST00000399264 PLB1Q6P1J6 1458 aa20.24■□□□□ 0.83
CCDC144A-205ENST00000399264 CHMP7Q8WUX9 453 aaPredicted RBP20.24■□□□□ 0.83
CCDC144A-205ENST00000399264 CFDP1Q9UEE9 299 aaPredicted RBP20.23■□□□□ 0.83
CCDC144A-205ENST00000399264 EIF4G3O43432 1585 aaKnown RBP20.2■□□□□ 0.82
CCDC144A-205ENST00000399264 RAPGEF6Q8TEU7 1601 aa20.2■□□□□ 0.82
CCDC144A-205ENST00000399264 CDK11AQ9UQ88 783 aaPredicted RBP20.2■□□□□ 0.82
CCDC144A-205ENST00000399264 ROCK1Q13464 1354 aa20.19■□□□□ 0.82
CCDC144A-205ENST00000399264 DNMT1P26358 1616 aaKnown RBP20.19■□□□□ 0.82
CCDC144A-205ENST00000399264 ZNF326Q5BKZ1 582 aaKnown RBP20.19■□□□□ 0.82
CCDC144A-205ENST00000399264 RPRD2Q5VT52 1461 aaKnown RBP20.19■□□□□ 0.82
CCDC144A-205ENST00000399264 CCDC7Q96M83 1385 aa20.18■□□□□ 0.82
CCDC144A-205ENST00000399264 FAM9BQ8IZU0 186 aa20.18■□□□□ 0.82
CCDC144A-205ENST00000399264 TEX14Q8IWB6 1497 aa20.16■□□□□ 0.82
CCDC144A-205ENST00000399264 PRKRIP1Q9H875 184 aaPredicted RBP20.16■□□□□ 0.82
CCDC144A-205ENST00000399264 CNTLNQ9NXG0 1405 aa20.15■□□□□ 0.82
CCDC144A-205ENST00000399264 NCOA1Q15788 1441 aa20.15■□□□□ 0.82
CCDC144A-205ENST00000399264 KIF14Q15058 1648 aa20.15■□□□□ 0.82
CCDC144A-205ENST00000399264 JPH4Q96JJ6 628 aa20.14■□□□□ 0.82
CCDC144A-205ENST00000399264 KIF7Q2M1P5 1343 aa20.14■□□□□ 0.82
CCDC144A-205ENST00000399264 CAMSAP2Q08AD1 1489 aa20.14■□□□□ 0.81
CCDC144A-205ENST00000399264 CEP170Q5SW79 1584 aa20.14■□□□□ 0.81
CCDC144A-205ENST00000399264 TROQ12816 1431 aaPredicted RBP20.13■□□□□ 0.81
CCDC144A-205ENST00000399264 POLR3GLQ9BT43 218 aa20.13■□□□□ 0.81
CCDC144A-205ENST00000399264 PZPP20742 1482 aa20.13■□□□□ 0.81
CCDC144A-205ENST00000399264 GPATCH8Q9UKJ3 1502 aaKnown RBP20.13■□□□□ 0.81
CCDC144A-205ENST00000399264 ERCC6Q03468 1493 aa20.13■□□□□ 0.81
CCDC144A-205ENST00000399264 SENP3-EIF4A1A0A087X0R7 540 aa20.12■□□□□ 0.81
CCDC144A-205ENST00000399264 PKD2Q13563 968 aa20.12■□□□□ 0.81
CCDC144A-205ENST00000399264 MRS2Q9HD23 443 aa20.11■□□□□ 0.81
CCDC144A-205ENST00000399264 SPATA31E1Q6ZUB1 1445 aa20.09■□□□□ 0.81
CCDC144A-205ENST00000399264 RBM19Q9Y4C8 960 aaKnown RBP20.08■□□□□ 0.8
CCDC144A-205ENST00000399264 SYNJ2O15056 1496 aa20.04■□□□□ 0.8
CCDC144A-205ENST00000399264 MAGI1Q96QZ7 1491 aaPredicted RBP20.02■□□□□ 0.8
CCDC144A-205ENST00000399264 MYT1Q01538 1121 aa20.02■□□□□ 0.8
CCDC144A-205ENST00000399264 PLEKHD1A6NEE1 506 aa20.02■□□□□ 0.79
CCDC144A-205ENST00000399264 HNRNPMP52272 730 aaKnown RBP eCLIP20.02■□□□□ 0.79
CCDC144A-205ENST00000399264 KDM2AQ9Y2K7 1162 aa20■□□□□ 0.79
CCDC144A-205ENST00000399264 ANKRD50Q9ULJ7 1429 aa20■□□□□ 0.79
CCDC144A-205ENST00000399264 KIAA1107Q9UPP5 1409 aa20■□□□□ 0.79
CCDC144A-205ENST00000399264 NUP155O75694 1391 aa19.99■□□□□ 0.79
CCDC144A-205ENST00000399264 ANKRD30AQ9BXX3 1397 aa19.98■□□□□ 0.79
CCDC144A-205ENST00000399264 CARMIL2Q6F5E8 1435 aa19.98■□□□□ 0.79
CCDC144A-205ENST00000399264 USP47Q96K76 1375 aa19.98■□□□□ 0.79
CCDC144A-205ENST00000399264 ATP10BO94823 1461 aa19.97■□□□□ 0.79
CCDC144A-205ENST00000399264 BCORL1Q5H9F3 1711 aa19.97■□□□□ 0.79
CCDC144A-205ENST00000399264 NUP160Q12769 1436 aa19.96■□□□□ 0.79
CCDC144A-205ENST00000399264 ITSN2Q9NZM3 1697 aa19.95■□□□□ 0.78
CCDC144A-205ENST00000399264 MBD5Q9P267 1494 aa19.94■□□□□ 0.78
CCDC144A-205ENST00000399264 ADGRL2O95490 1459 aa19.94■□□□□ 0.78
CCDC144A-205ENST00000399264 DHX29Q7Z478 1369 aaKnown RBP19.94■□□□□ 0.78
CCDC144A-205ENST00000399264 ADGBQ8N7X0 1667 aa19.94■□□□□ 0.78
CCDC144A-205ENST00000399264 ANP32EQ9BTT0 268 aa19.93■□□□□ 0.78
CCDC144A-205ENST00000399264 CDC42BPAQ5VT25 1732 aa19.93■□□□□ 0.78
CCDC144A-205ENST00000399264 C9orf84Q5VXU9 1444 aa19.92■□□□□ 0.78
CCDC144A-205ENST00000399264 TSPY4P0CV99 314 aa19.91■□□□□ 0.78
CCDC144A-205ENST00000399264 TSPY10P0CW01 314 aa19.91■□□□□ 0.78
CCDC144A-205ENST00000399264 ABCC10Q5T3U5 1492 aa19.91■□□□□ 0.78
CCDC144A-205ENST00000399264 ADCY10Q96PN6 1610 aa19.91■□□□□ 0.78
CCDC144A-205ENST00000399264 CROCC2H7BZ55 1655 aa19.91■□□□□ 0.78
CCDC144A-205ENST00000399264 ZBED9Q6R2W3 1325 aa19.9■□□□□ 0.78
CCDC144A-205ENST00000399264 B4GALNT3Q6L9W6 998 aa19.9■□□□□ 0.78
CCDC144A-205ENST00000399264 CARD11Q9BXL7 1154 aa19.89■□□□□ 0.78
CCDC144A-205ENST00000399264 DCAF11Q8TEB1 546 aa19.89■□□□□ 0.77
CCDC144A-205ENST00000399264 ABCA8O94911 1581 aa19.88■□□□□ 0.77
CCDC144A-205ENST00000399264 ST20-MTHFSA0A0A6YYL1 179 aa19.88■□□□□ 0.77
CCDC144A-205ENST00000399264 KIF15Q9NS87 1388 aa19.87■□□□□ 0.77
CCDC144A-205ENST00000399264 MSH5O43196 834 aa19.85■□□□□ 0.77
CCDC144A-205ENST00000399264 POLR1AO95602 1720 aaPredicted RBP19.85■□□□□ 0.77
CCDC144A-205ENST00000399264 RGL3Q3MIN7 710 aa19.84■□□□□ 0.77
CCDC144A-205ENST00000399264 KDM5CP41229 1560 aa19.84■□□□□ 0.77
CCDC144A-205ENST00000399264 PPP4R2Q9NY27 417 aa19.83■□□□□ 0.76
CCDC144A-205ENST00000399264 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.82■□□□□ 0.76
CCDC144A-205ENST00000399264 PTPRGP23470 1445 aa19.82■□□□□ 0.76
CCDC144A-205ENST00000399264 NBPF1Q3BBV0 1214 aa19.78■□□□□ 0.76
CCDC144A-205ENST00000399264 UHRF1BP1Q6BDS2 1440 aa19.78■□□□□ 0.76
CCDC144A-205ENST00000399264 PNISRQ8TF01 805 aaKnown RBP19.77■□□□□ 0.76
CCDC144A-205ENST00000399264 RALGAPBQ86X10 1494 aa19.76■□□□□ 0.75
CCDC144A-205ENST00000399264 TMC1Q8TDI8 760 aa19.76■□□□□ 0.75
CCDC144A-205ENST00000399264 SHANK2Q9UPX8 1470 aa19.76■□□□□ 0.75
CCDC144A-205ENST00000399264 SAMD9LQ8IVG5 1584 aa19.74■□□□□ 0.75
CCDC144A-205ENST00000399264 SALL2Q9Y467 1007 aaPredicted RBP19.74■□□□□ 0.75
CCDC144A-205ENST00000399264 CDC42BPBQ9Y5S2 1711 aa19.73■□□□□ 0.75
CCDC144A-205ENST00000399264 ROCK2O75116 1388 aaKnown RBP19.73■□□□□ 0.75
CCDC144A-205ENST00000399264 FAM135AQ9P2D6 1515 aa19.7■□□□□ 0.74
CCDC144A-205ENST00000399264 ERICH6BQ5W0A0 696 aa19.7■□□□□ 0.74
CCDC144A-205ENST00000399264 NUDCQ9Y266 331 aa19.7■□□□□ 0.74
CCDC144A-205ENST00000399264 CCDC141Q6ZP82 1450 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms