RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 TMX4Q9H1E5 349 aaPredicted RBP14.65□□□□□ -0.06
HLCS-202ENST00000399120 CFDP1Q9UEE9 299 aaPredicted RBP14.65□□□□□ -0.06
HLCS-202ENST00000399120 CLIP1P30622 1438 aa14.65□□□□□ -0.06
HLCS-202ENST00000399120 TMF1P82094 1093 aa14.64□□□□□ -0.07
HLCS-202ENST00000399120 RASSF8Q8NHQ8 419 aa14.64□□□□□ -0.07
HLCS-202ENST00000399120 IPO8O15397 1037 aaKnown RBP14.63□□□□□ -0.07
HLCS-202ENST00000399120 SETQ01105 290 aaPredicted RBP14.63□□□□□ -0.07
HLCS-202ENST00000399120 TPM3P06753 285 aa14.62□□□□□ -0.07
HLCS-202ENST00000399120 CSPP1Q1MSJ5 1256 aa14.62□□□□□ -0.07
HLCS-202ENST00000399120 CREBRFQ8IUR6 639 aa14.62□□□□□ -0.07
HLCS-202ENST00000399120 MORC1Q86VD1 984 aa14.61□□□□□ -0.07
HLCS-202ENST00000399120 SRPK2P78362 688 aaKnown RBP14.61□□□□□ -0.07
HLCS-202ENST00000399120 GORABQ5T7V8 394 aa14.6□□□□□ -0.07
HLCS-202ENST00000399120 HDGFP51858 240 aaKnown RBP14.6□□□□□ -0.07
HLCS-202ENST00000399120 ZNF330Q9Y3S2 320 aaPredicted RBP14.6□□□□□ -0.07
HLCS-202ENST00000399120 GPATCH3Q96I76 525 aa14.59□□□□□ -0.07
HLCS-202ENST00000399120 GOLGA6L3A6NEY3 463 aa14.58□□□□□ -0.08
HLCS-202ENST00000399120 ZCCHC6Q5VYS8 1495 aaKnown RBP14.58□□□□□ -0.08
HLCS-202ENST00000399120 SLKQ9H2G2 1235 aaPredicted RBP14.58□□□□□ -0.08
HLCS-202ENST00000399120 RWDD1Q9H446 243 aaPredicted RBP14.57□□□□□ -0.08
HLCS-202ENST00000399120 CALD1Q05682 793 aaKnown RBP14.56□□□□□ -0.08
HLCS-202ENST00000399120 TAF7LQ5H9L4 462 aa14.56□□□□□ -0.08
HLCS-202ENST00000399120 ITPRIPQ8IWB1 547 aa14.56□□□□□ -0.08
HLCS-202ENST00000399120 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.55□□□□□ -0.08
HLCS-202ENST00000399120 G3V3G9 751 aa14.54□□□□□ -0.08
HLCS-202ENST00000399120 MARCH6O60337 910 aa14.54□□□□□ -0.08
HLCS-202ENST00000399120 DCAF8Q5TAQ9 597 aa14.54□□□□□ -0.08
HLCS-202ENST00000399120 CHMP3Q9Y3E7 222 aa14.54□□□□□ -0.08
HLCS-202ENST00000399120 VPS53Q5VIR6 699 aa14.53□□□□□ -0.08
HLCS-202ENST00000399120 SCRIBQ14160 1630 aa14.53□□□□□ -0.08
HLCS-202ENST00000399120 PHF14O94880 888 aa14.53□□□□□ -0.08
HLCS-202ENST00000399120 TRIM6-TRIM34B2RNG4 842 aa14.53□□□□□ -0.08
HLCS-202ENST00000399120 CSB-PGBD3P0DP91 1061 aa14.53□□□□□ -0.08
HLCS-202ENST00000399120 CALRP27797 417 aaKnown RBP14.53□□□□□ -0.08
HLCS-202ENST00000399120 KANK1Q14678 1352 aa14.52□□□□□ -0.08
HLCS-202ENST00000399120 HDGFL2Q7Z4V5 671 aaPredicted RBP14.52□□□□□ -0.08
HLCS-202ENST00000399120 CHMP4AQ9BY43 222 aa14.52□□□□□ -0.09
HLCS-202ENST00000399120 ANO8Q9HCE9 1232 aaPredicted RBP14.51□□□□□ -0.09
HLCS-202ENST00000399120 MFAP1P55081 439 aaKnown RBP14.51□□□□□ -0.09
HLCS-202ENST00000399120 PES1O00541 588 aaKnown RBP14.51□□□□□ -0.09
HLCS-202ENST00000399120 DCAF11Q8TEB1 546 aa14.51□□□□□ -0.09
HLCS-202ENST00000399120 SAFB2Q14151 953 aaKnown RBP eCLIP14.51□□□□□ -0.096e-6■■■□□ 18.5
HLCS-202ENST00000399120 TPD52L1Q16890 204 aaPredicted RBP14.5□□□□□ -0.09
HLCS-202ENST00000399120 TSR1Q2NL82 804 aaKnown RBP14.5□□□□□ -0.09
HLCS-202ENST00000399120 RBM19Q9Y4C8 960 aaKnown RBP14.5□□□□□ -0.09
HLCS-202ENST00000399120 PATL2C9JE40 543 aaKnown RBP14.5□□□□□ -0.09
HLCS-202ENST00000399120 SF3A1Q15459 793 aaKnown RBP14.5□□□□□ -0.09
HLCS-202ENST00000399120 HDAC5Q9UQL6 1122 aa14.5□□□□□ -0.09
HLCS-202ENST00000399120 PMFBP1Q8TBY8 1022 aa14.49□□□□□ -0.09
HLCS-202ENST00000399120 TCERG1O14776 1098 aaKnown RBP14.49□□□□□ -0.09
HLCS-202ENST00000399120 SIN3AQ96ST3 1273 aa14.49□□□□□ -0.09
HLCS-202ENST00000399120 STK31Q9BXU1 1019 aa14.49□□□□□ -0.09
HLCS-202ENST00000399120 PAK3O75914 559 aaPredicted RBP14.49□□□□□ -0.09
HLCS-202ENST00000399120 TOMM22Q9NS69 142 aa14.48□□□□□ -0.09
HLCS-202ENST00000399120 KIF3AQ9Y496 699 aa14.48□□□□□ -0.09
HLCS-202ENST00000399120 FBXO3Q9UK99 471 aa14.48□□□□□ -0.09
HLCS-202ENST00000399120 KRI1Q8N9T8 703 aaKnown RBP14.48□□□□□ -0.09
HLCS-202ENST00000399120 HMMRO75330 724 aa14.48□□□□□ -0.09
HLCS-202ENST00000399120 CCDC70Q6NSX1 233 aa14.47□□□□□ -0.09
HLCS-202ENST00000399120 NOL8Q76FK4 1167 aaKnown RBP14.47□□□□□ -0.09
HLCS-202ENST00000399120 KIF16BQ96L93 1317 aa14.47□□□□□ -0.09
HLCS-202ENST00000399120 TPM2P07951 284 aa14.47□□□□□ -0.09
HLCS-202ENST00000399120 GPS2Q13227 327 aa14.47□□□□□ -0.09
HLCS-202ENST00000399120 CCAR2Q8N163 923 aaKnown RBP14.47□□□□□ -0.09
HLCS-202ENST00000399120 SPAG9O60271 1321 aaKnown RBP14.46□□□□□ -0.09
HLCS-202ENST00000399120 KTN1Q86UP2 1357 aaKnown RBP14.46□□□□□ -0.09
HLCS-202ENST00000399120 WWC1Q8IX03 1113 aa14.46□□□□□ -0.1
HLCS-202ENST00000399120 U2AF1L5P0DN76 240 aaPredicted RBP14.45□□□□□ -0.1
HLCS-202ENST00000399120 U2AF1Q01081 240 aaKnown RBP eCLIP14.45□□□□□ -0.1
HLCS-202ENST00000399120 FOXD4L1Q9NU39 408 aa14.45□□□□□ -0.1
HLCS-202ENST00000399120 MLECQ14165 292 aa14.45□□□□□ -0.1
HLCS-202ENST00000399120 RCAN3Q9UKA8 241 aa14.45□□□□□ -0.1
HLCS-202ENST00000399120 TPM1P09493 284 aa14.45□□□□□ -0.1
HLCS-202ENST00000399120 GOLGA3Q08378 1498 aa14.44□□□□□ -0.1
HLCS-202ENST00000399120 FRAT2O75474 233 aaPredicted RBP14.44□□□□□ -0.1
HLCS-202ENST00000399120 STK26Q9P289 416 aa14.44□□□□□ -0.1
HLCS-202ENST00000399120 ST18O60284 1047 aa14.43□□□□□ -0.1
HLCS-202ENST00000399120 HSP90AA2PQ14568 343 aaPredicted RBP14.43□□□□□ -0.1
HLCS-202ENST00000399120 CCDC9Q9Y3X0 531 aaKnown RBP14.43□□□□□ -0.1
HLCS-202ENST00000399120 GOLGA6L19H0YKK7 550 aa14.42□□□□□ -0.1
HLCS-202ENST00000399120 CCER2I3L3R5 266 aa14.42□□□□□ -0.1
HLCS-202ENST00000399120 H3BQV1 296 aa14.42□□□□□ -0.1
HLCS-202ENST00000399120 IFFO2Q5TF58 517 aa14.42□□□□□ -0.1
HLCS-202ENST00000399120 RRP12Q5JTH9 1297 aaKnown RBP14.41□□□□□ -0.1
HLCS-202ENST00000399120 SMC4Q9NTJ3 1288 aa14.41□□□□□ -0.1
HLCS-202ENST00000399120 SLC4A10Q6U841 1118 aa14.4□□□□□ -0.1
HLCS-202ENST00000399120 CEP162Q5TB80 1403 aa14.4□□□□□ -0.1
HLCS-202ENST00000399120 FOXD4L5Q5VV16 416 aaPredicted RBP14.4□□□□□ -0.1
HLCS-202ENST00000399120 FOXD4L4Q8WXT5 416 aaPredicted RBP14.4□□□□□ -0.1
HLCS-202ENST00000399120 AKAP17AQ02040 695 aaKnown RBP14.39□□□□□ -0.11
HLCS-202ENST00000399120 CCNB3Q8WWL7 1395 aa14.39□□□□□ -0.11
HLCS-202ENST00000399120 DDX11L8A8MPP1 907 aa14.38□□□□□ -0.11
HLCS-202ENST00000399120 BECN2A8MW95 431 aa14.38□□□□□ -0.11
HLCS-202ENST00000399120 FAM184AQ8NB25 1140 aa14.38□□□□□ -0.11
HLCS-202ENST00000399120 ZNF771Q7L3S4 317 aaPredicted RBP14.38□□□□□ -0.11
HLCS-202ENST00000399120 TCEAL9Q9UHQ7 104 aa14.38□□□□□ -0.11
HLCS-202ENST00000399120 GTF2E1P29083 439 aaPredicted RBP14.38□□□□□ -0.11
HLCS-202ENST00000399120 CHMP4CQ96CF2 233 aa14.38□□□□□ -0.11
HLCS-202ENST00000399120 TRHP20396 242 aaPredicted RBP14.37□□□□□ -0.11
HLCS-202ENST00000399120 PCMTD1Q96MG8 357 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms