RNA–Protein interactions for RNA: ENST00000399003.1

AP002358.1-201, humanhuman

TSL 2 BASIC

Gene AP002358.1, Length 2,805 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002358.1-201ENST00000399003 NCOA1Q15788 1441 aa11.78□□□□□ -0.52
AP002358.1-201ENST00000399003 CDK13Q14004 1512 aaKnown RBP11.77□□□□□ -0.52
AP002358.1-201ENST00000399003 RAPGEF6Q8TEU7 1601 aa11.76□□□□□ -0.53
AP002358.1-201ENST00000399003 ERICH6BQ5W0A0 696 aa11.76□□□□□ -0.53
AP002358.1-201ENST00000399003 DAPK1P53355 1430 aa11.76□□□□□ -0.53
AP002358.1-201ENST00000399003 DAXXQ9UER7 740 aaPredicted RBP11.76□□□□□ -0.53
AP002358.1-201ENST00000399003 ERCC6Q03468 1493 aa11.75□□□□□ -0.53
AP002358.1-201ENST00000399003 WASHC2AQ641Q2 1341 aa11.75□□□□□ -0.53
AP002358.1-201ENST00000399003 MRC2Q9UBG0 1479 aa11.75□□□□□ -0.53
AP002358.1-201ENST00000399003 ANKRD30BQ9BXX2 1392 aa11.73□□□□□ -0.53
AP002358.1-201ENST00000399003 HIRIP3Q9BW71 556 aaPredicted RBP11.73□□□□□ -0.53
AP002358.1-201ENST00000399003 DISP1Q96F81 1524 aa11.73□□□□□ -0.53
AP002358.1-201ENST00000399003 KIAA0586Q9BVV6 1533 aa11.73□□□□□ -0.53
AP002358.1-201ENST00000399003 SPATA31E1Q6ZUB1 1445 aa11.73□□□□□ -0.53
AP002358.1-201ENST00000399003 MBD5Q9P267 1494 aa11.72□□□□□ -0.53
AP002358.1-201ENST00000399003 TRIM52Q96A61 297 aa11.72□□□□□ -0.53
AP002358.1-201ENST00000399003 HSPA5P11021 654 aaKnown RBP11.72□□□□□ -0.53
AP002358.1-201ENST00000399003 ADGRL2O95490 1459 aa11.72□□□□□ -0.53
AP002358.1-201ENST00000399003 EIF4G2P78344 907 aaKnown RBP eCLIP11.71□□□□□ -0.53
AP002358.1-201ENST00000399003 IFT140Q96RY7 1462 aa11.71□□□□□ -0.53
AP002358.1-201ENST00000399003 ABCC5O15440 1437 aa11.71□□□□□ -0.53
AP002358.1-201ENST00000399003 KIF14Q15058 1648 aa11.71□□□□□ -0.53
AP002358.1-201ENST00000399003 CCDC7Q96M83 1385 aa11.71□□□□□ -0.53
AP002358.1-201ENST00000399003 NUP153P49790 1475 aaKnown RBP11.71□□□□□ -0.54
AP002358.1-201ENST00000399003 ANO8Q9HCE9 1232 aaPredicted RBP11.71□□□□□ -0.54
AP002358.1-201ENST00000399003 DEKP35659 375 aaKnown RBP11.7□□□□□ -0.54
AP002358.1-201ENST00000399003 MPHOSPH9Q99550 1183 aa11.7□□□□□ -0.54
AP002358.1-201ENST00000399003 PZPP20742 1482 aa11.68□□□□□ -0.54
AP002358.1-201ENST00000399003 RRP7BPQ9NSQ0 103 aa11.68□□□□□ -0.54
AP002358.1-201ENST00000399003 EIF4G3O43432 1585 aaKnown RBP11.66□□□□□ -0.54
AP002358.1-201ENST00000399003 L3MBTL2Q969R5 705 aa11.65□□□□□ -0.54
AP002358.1-201ENST00000399003 CAMSAP2Q08AD1 1489 aa11.65□□□□□ -0.54
AP002358.1-201ENST00000399003 GRIN2AQ12879 1464 aa11.65□□□□□ -0.54
AP002358.1-201ENST00000399003 KDM5DQ9BY66 1539 aa11.65□□□□□ -0.54
AP002358.1-201ENST00000399003 KDM5CP41229 1560 aa11.65□□□□□ -0.54
AP002358.1-201ENST00000399003 HNRNPUQ00839 825 aaKnown RBP eCLIP11.65□□□□□ -0.54
AP002358.1-201ENST00000399003 TROQ12816 1431 aaPredicted RBP11.65□□□□□ -0.55
AP002358.1-201ENST00000399003 ZBED9Q6R2W3 1325 aa11.64□□□□□ -0.55
AP002358.1-201ENST00000399003 SHANK2Q9UPX8 1470 aa11.64□□□□□ -0.55
AP002358.1-201ENST00000399003 PRKRIP1Q9H875 184 aaPredicted RBP11.64□□□□□ -0.55
AP002358.1-201ENST00000399003 ARHGEF12Q9NZN5 1544 aa11.63□□□□□ -0.55
AP002358.1-201ENST00000399003 BCORL1Q5H9F3 1711 aa11.63□□□□□ -0.55
AP002358.1-201ENST00000399003 CDC42BPAQ5VT25 1732 aa11.63□□□□□ -0.55
AP002358.1-201ENST00000399003 ARID4BQ4LE39 1312 aaPredicted RBP11.62□□□□□ -0.55
AP002358.1-201ENST00000399003 MAGI1Q96QZ7 1491 aaPredicted RBP11.62□□□□□ -0.55
AP002358.1-201ENST00000399003 UHRF1BP1Q6BDS2 1440 aa11.62□□□□□ -0.55
AP002358.1-201ENST00000399003 CHIC2Q9UKJ5 165 aa11.62□□□□□ -0.55
AP002358.1-201ENST00000399003 E9PCH4 1651 aa11.62□□□□□ -0.55
AP002358.1-201ENST00000399003 KIAA1107Q9UPP5 1409 aa11.61□□□□□ -0.55
AP002358.1-201ENST00000399003 GPATCH8Q9UKJ3 1502 aaKnown RBP11.6□□□□□ -0.55
AP002358.1-201ENST00000399003 CDK11AQ9UQ88 783 aaPredicted RBP11.6□□□□□ -0.55
AP002358.1-201ENST00000399003 ZNF608Q9ULD9 1512 aaPredicted RBP11.6□□□□□ -0.55
AP002358.1-201ENST00000399003 RALGAPBQ86X10 1494 aa11.59□□□□□ -0.55
AP002358.1-201ENST00000399003 PPP4R2Q9NY27 417 aa11.59□□□□□ -0.55
AP002358.1-201ENST00000399003 CEP170Q5SW79 1584 aa11.59□□□□□ -0.55
AP002358.1-201ENST00000399003 C11orf95C9JLR9 678 aaPredicted RBP11.59□□□□□ -0.55
AP002358.1-201ENST00000399003 NBPF8Q3BBV2 869 aa11.59□□□□□ -0.55
AP002358.1-201ENST00000399003 KIF7Q2M1P5 1343 aa11.59□□□□□ -0.55
AP002358.1-201ENST00000399003 DHX29Q7Z478 1369 aaKnown RBP11.58□□□□□ -0.56
AP002358.1-201ENST00000399003 SMG6Q86US8 1419 aaKnown RBP11.58□□□□□ -0.56
AP002358.1-201ENST00000399003 SALL2Q9Y467 1007 aaPredicted RBP11.58□□□□□ -0.56
AP002358.1-201ENST00000399003 ARHGEF5Q12774 1597 aa11.57□□□□□ -0.56
AP002358.1-201ENST00000399003 ABCA8O94911 1581 aa11.57□□□□□ -0.56
AP002358.1-201ENST00000399003 UBE2Q2Q8WVN8 375 aa11.56□□□□□ -0.56
AP002358.1-201ENST00000399003 ROCK2O75116 1388 aaKnown RBP11.56□□□□□ -0.56
AP002358.1-201ENST00000399003 SYNJ2O15056 1496 aa11.56□□□□□ -0.56
AP002358.1-201ENST00000399003 ABCC10Q5T3U5 1492 aa11.55□□□□□ -0.56
AP002358.1-201ENST00000399003 PTPRGP23470 1445 aa11.55□□□□□ -0.56
AP002358.1-201ENST00000399003 NUP160Q12769 1436 aa11.55□□□□□ -0.56
AP002358.1-201ENST00000399003 CCDC184Q52MB2 194 aa11.55□□□□□ -0.56
AP002358.1-201ENST00000399003 RNF123Q5XPI4 1314 aa11.54□□□□□ -0.56
AP002358.1-201ENST00000399003 PRG4Q92954 1404 aaPredicted RBP11.54□□□□□ -0.56
AP002358.1-201ENST00000399003 LAMC1P11047 1609 aa11.54□□□□□ -0.56
AP002358.1-201ENST00000399003 SLC4A1APQ9BWU0 796 aaKnown RBP11.54□□□□□ -0.56
AP002358.1-201ENST00000399003 ANKRD30AQ9BXX3 1397 aa11.54□□□□□ -0.56
AP002358.1-201ENST00000399003 KTN1Q86UP2 1357 aaKnown RBP11.53□□□□□ -0.56
AP002358.1-201ENST00000399003 AEBP2Q6ZN18 517 aaPredicted RBP11.53□□□□□ -0.56
AP002358.1-201ENST00000399003 MRS2Q9HD23 443 aa11.53□□□□□ -0.56
AP002358.1-201ENST00000399003 USP47Q96K76 1375 aa11.53□□□□□ -0.56
AP002358.1-201ENST00000399003 FOXD1Q16676 465 aa11.52□□□□□ -0.56
AP002358.1-201ENST00000399003 ZNF644Q9H582 1327 aaPredicted RBP11.51□□□□□ -0.57
AP002358.1-201ENST00000399003 PLB1Q6P1J6 1458 aa11.51□□□□□ -0.57
AP002358.1-201ENST00000399003 DNAJC5Q9H3Z4 198 aa11.51□□□□□ -0.57
AP002358.1-201ENST00000399003 ANKRD50Q9ULJ7 1429 aa11.51□□□□□ -0.57
AP002358.1-201ENST00000399003 CARMIL2Q6F5E8 1435 aa11.5□□□□□ -0.57
AP002358.1-201ENST00000399003 PREX2Q70Z35 1606 aa11.5□□□□□ -0.57
AP002358.1-201ENST00000399003 TRPM1Q7Z4N2 1603 aa11.5□□□□□ -0.57
AP002358.1-201ENST00000399003 MAST1Q9Y2H9 1570 aa11.5□□□□□ -0.57
AP002358.1-201ENST00000399003 UNC13BO14795 1591 aa11.49□□□□□ -0.57
AP002358.1-201ENST00000399003 ZMYM4Q5VZL5 1548 aa11.49□□□□□ -0.57
AP002358.1-201ENST00000399003 C9orf84Q5VXU9 1444 aa11.48□□□□□ -0.57
AP002358.1-201ENST00000399003 CFDP1Q9UEE9 299 aaPredicted RBP11.48□□□□□ -0.57
AP002358.1-201ENST00000399003 LRPPRCP42704 1394 aaKnown RBP11.48□□□□□ -0.57
AP002358.1-201ENST00000399003 NOP58Q9Y2X3 529 aaKnown RBP11.47□□□□□ -0.57
AP002358.1-201ENST00000399003 CDC42BPBQ9Y5S2 1711 aa11.47□□□□□ -0.57
AP002358.1-201ENST00000399003 FAM9BQ8IZU0 186 aa11.46□□□□□ -0.57
AP002358.1-201ENST00000399003 NUDCQ9Y266 331 aa11.46□□□□□ -0.58
AP002358.1-201ENST00000399003 INSRP06213 1382 aa11.45□□□□□ -0.58
AP002358.1-201ENST00000399003 KIF15Q9NS87 1388 aa11.45□□□□□ -0.58
AP002358.1-201ENST00000399003 IRX6P78412 446 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms