RNA–Protein interactions for RNA: ENST00000398985.1

KSR1-203, Transcript of kinase suppressor of ras 1, humanhuman

TSL 2

Gene KSR1, Length 2,527 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KSR1-203ENST00000398985 KDM5BQ9UGL1 1544 aa21.93■■□□□ 1.1
KSR1-203ENST00000398985 TIMELESSQ9UNS1 1208 aa21.92■■□□□ 1.1
KSR1-203ENST00000398985 NPM1P06748 294 aaKnown RBP eCLIP21.91■■□□□ 1.1
KSR1-203ENST00000398985 LRRC9Q6ZRR7 1453 aa21.91■■□□□ 1.1
KSR1-203ENST00000398985 MAP3K1Q13233 1512 aa21.9■■□□□ 1.1
KSR1-203ENST00000398985 ZCCHC11Q5TAX3 1644 aaKnown RBP21.9■■□□□ 1.1
KSR1-203ENST00000398985 MSH5O43196 834 aa21.89■■□□□ 1.1
KSR1-203ENST00000398985 CFAP43Q8NDM7 1665 aa21.89■■□□□ 1.1
KSR1-203ENST00000398985 CDK11AQ9UQ88 783 aaPredicted RBP21.87■■□□□ 1.09
KSR1-203ENST00000398985 MAGI3Q5TCQ9 1506 aa21.86■■□□□ 1.09
KSR1-203ENST00000398985 MTUS2Q5JR59 1369 aa21.86■■□□□ 1.09
KSR1-203ENST00000398985 PLEKHD1A6NEE1 506 aa21.86■■□□□ 1.09
KSR1-203ENST00000398985 ASXL2Q76L83 1435 aa21.79■■□□□ 1.08
KSR1-203ENST00000398985 IRX6P78412 446 aaPredicted RBP21.79■■□□□ 1.08
KSR1-203ENST00000398985 TROQ12816 1431 aaPredicted RBP21.79■■□□□ 1.08
KSR1-203ENST00000398985 TONSLQ96HA7 1378 aa21.77■■□□□ 1.08
KSR1-203ENST00000398985 EHBP1L1Q8N3D4 1523 aa21.77■■□□□ 1.08
KSR1-203ENST00000398985 HNRNPUQ00839 825 aaKnown RBP eCLIP21.76■■□□□ 1.07
KSR1-203ENST00000398985 FANCIQ9NVI1 1328 aa21.75■■□□□ 1.07
KSR1-203ENST00000398985 WDR7Q9Y4E6 1490 aa21.75■■□□□ 1.07
KSR1-203ENST00000398985 ERICH6Q7L0X2 663 aa21.74■■□□□ 1.07
KSR1-203ENST00000398985 KIF14Q15058 1648 aa21.72■■□□□ 1.07
KSR1-203ENST00000398985 NCOA2Q15596 1464 aa21.7■■□□□ 1.06
KSR1-203ENST00000398985 SUPT6HQ7KZ85 1726 aaKnown RBP21.69■■□□□ 1.06
KSR1-203ENST00000398985 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.63■■□□□ 1.05
KSR1-203ENST00000398985 ABCC10Q5T3U5 1492 aa21.62■■□□□ 1.05
KSR1-203ENST00000398985 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.61■■□□□ 1.05
KSR1-203ENST00000398985 TTC37Q6PGP7 1564 aa21.61■■□□□ 1.05
KSR1-203ENST00000398985 FAM69CQ0P6D2 419 aa21.59■■□□□ 1.05
KSR1-203ENST00000398985 GPATCH8Q9UKJ3 1502 aaKnown RBP21.57■■□□□ 1.04
KSR1-203ENST00000398985 MYOM3Q5VTT5 1437 aa21.57■■□□□ 1.04
KSR1-203ENST00000398985 PPP4R2Q9NY27 417 aa21.57■■□□□ 1.04
KSR1-203ENST00000398985 FGD6Q6ZV73 1430 aa21.56■■□□□ 1.04
KSR1-203ENST00000398985 ABCA9Q8IUA7 1624 aa21.55■■□□□ 1.04
KSR1-203ENST00000398985 DIP2BQ9P265 1576 aa21.55■■□□□ 1.04
KSR1-203ENST00000398985 ERICH6BQ5W0A0 696 aa21.54■■□□□ 1.04
KSR1-203ENST00000398985 CFDP1Q9UEE9 299 aaPredicted RBP21.54■■□□□ 1.04
KSR1-203ENST00000398985 WASHC2AQ641Q2 1341 aa21.53■■□□□ 1.04
KSR1-203ENST00000398985 CDC42BPAQ5VT25 1732 aa21.53■■□□□ 1.04
KSR1-203ENST00000398985 PTPRKQ15262 1439 aa21.52■■□□□ 1.04
KSR1-203ENST00000398985 ZNF777Q9ULD5 760 aaPredicted RBP21.52■■□□□ 1.03
KSR1-203ENST00000398985 HFM1A2PYH4 1435 aa21.51■■□□□ 1.03
KSR1-203ENST00000398985 CD109Q6YHK3 1445 aa21.51■■□□□ 1.03
KSR1-203ENST00000398985 HSPA5P11021 654 aaKnown RBP21.51■■□□□ 1.03
KSR1-203ENST00000398985 PLCH2O75038 1416 aa21.51■■□□□ 1.03
KSR1-203ENST00000398985 GLI2P10070 1586 aa21.5■■□□□ 1.03
KSR1-203ENST00000398985 ZNF644Q9H582 1327 aaPredicted RBP21.5■■□□□ 1.03
KSR1-203ENST00000398985 CCDC184Q52MB2 194 aa21.5■■□□□ 1.03
KSR1-203ENST00000398985 MYO5CQ9NQX4 1742 aa21.49■■□□□ 1.03
KSR1-203ENST00000398985 TRHP20396 242 aaPredicted RBP21.49■■□□□ 1.03
KSR1-203ENST00000398985 PTPN23Q9H3S7 1636 aa21.49■■□□□ 1.03
KSR1-203ENST00000398985 B4GALNT3Q6L9W6 998 aa21.48■■□□□ 1.03
KSR1-203ENST00000398985 CDC42BPBQ9Y5S2 1711 aa21.48■■□□□ 1.03
KSR1-203ENST00000398985 ITSN2Q9NZM3 1697 aa21.48■■□□□ 1.03
KSR1-203ENST00000398985 PREX2Q70Z35 1606 aa21.48■■□□□ 1.03
KSR1-203ENST00000398985 ARHGAP5Q13017 1502 aa21.48■■□□□ 1.03
KSR1-203ENST00000398985 KIF13AQ9H1H9 1805 aa21.47■■□□□ 1.03
KSR1-203ENST00000398985 MIA2Q96PC5 1412 aa21.47■■□□□ 1.03
KSR1-203ENST00000398985 NAIPQ13075 1403 aa21.45■■□□□ 1.02
KSR1-203ENST00000398985 FAM9BQ8IZU0 186 aa21.45■■□□□ 1.02
KSR1-203ENST00000398985 MAP3K4Q9Y6R4 1608 aa21.45■■□□□ 1.02
KSR1-203ENST00000398985 EFCAB2Q5VUJ9 269 aa21.44■■□□□ 1.02
KSR1-203ENST00000398985 MYT1LQ9UL68 1186 aa21.44■■□□□ 1.02
KSR1-203ENST00000398985 DEKP35659 375 aaKnown RBP21.43■■□□□ 1.02
KSR1-203ENST00000398985 EIF4G2P78344 907 aaKnown RBP eCLIP21.42■■□□□ 1.02
KSR1-203ENST00000398985 FANCAO15360 1455 aa21.42■■□□□ 1.02
KSR1-203ENST00000398985 TSPOAP1O95153 1857 aa21.41■■□□□ 1.02
KSR1-203ENST00000398985 CAMSAP2Q08AD1 1489 aa21.4■■□□□ 1.02
KSR1-203ENST00000398985 ARAP3Q8WWN8 1544 aa21.4■■□□□ 1.02
KSR1-203ENST00000398985 CNTLNQ9NXG0 1405 aa21.39■■□□□ 1.02
KSR1-203ENST00000398985 TCOF1Q13428 1488 aaKnown RBP21.39■■□□□ 1.01
KSR1-203ENST00000398985 SAMD9LQ8IVG5 1584 aa21.39■■□□□ 1.01
KSR1-203ENST00000398985 MRS2Q9HD23 443 aa21.38■■□□□ 1.01
KSR1-203ENST00000398985 HNRNPMP52272 730 aaKnown RBP eCLIP21.37■■□□□ 1.01
KSR1-203ENST00000398985 PRKRIP1Q9H875 184 aaPredicted RBP21.37■■□□□ 1.01
KSR1-203ENST00000398985 RRP7BPQ9NSQ0 103 aa21.36■■□□□ 1.01
KSR1-203ENST00000398985 ZBED9Q6R2W3 1325 aa21.35■■□□□ 1.01
KSR1-203ENST00000398985 C11orf95C9JLR9 678 aaPredicted RBP21.34■■□□□ 1.01
KSR1-203ENST00000398985 PPRC1Q5VV67 1664 aaKnown RBP21.34■■□□□ 1.01
KSR1-203ENST00000398985 AKNAQ7Z591 1439 aa21.34■■□□□ 1.01
KSR1-203ENST00000398985 NOP58Q9Y2X3 529 aaKnown RBP21.34■■□□□ 1.01
KSR1-203ENST00000398985 CHIC2Q9UKJ5 165 aa21.33■■□□□ 1.01
KSR1-203ENST00000398985 SYCP2Q9BX26 1530 aa21.32■■□□□ 1
KSR1-203ENST00000398985 ARHGEF12Q9NZN5 1544 aa21.32■■□□□ 1
KSR1-203ENST00000398985 NBR1Q14596 966 aa21.32■■□□□ 1
KSR1-203ENST00000398985 ADGRL1O94910 1474 aa21.31■■□□□ 1
KSR1-203ENST00000398985 NEO1Q92859 1461 aa21.3■■□□□ 1
KSR1-203ENST00000398985 TEX14Q8IWB6 1497 aa21.3■■□□□ 1
KSR1-203ENST00000398985 MBD5Q9P267 1494 aa21.3■■□□□ 1
KSR1-203ENST00000398985 CCDC7Q96M83 1385 aa21.3■■□□□ 1
KSR1-203ENST00000398985 ABCC1P33527 1531 aa21.3■■□□□ 1
KSR1-203ENST00000398985 SCAPERQ9BY12 1400 aa21.3■■□□□ 1
KSR1-203ENST00000398985 KIAA1107Q9UPP5 1409 aa21.29■■□□□ 1
KSR1-203ENST00000398985 PLEKHH2Q8IVE3 1493 aa21.29■■□□□ 1
KSR1-203ENST00000398985 CFAP74Q9C0B2 1584 aa21.28■■□□□ 1
KSR1-203ENST00000398985 PAK3O75914 559 aaPredicted RBP21.28■■□□□ 1
KSR1-203ENST00000398985 L3MBTL2Q969R5 705 aa21.28■■□□□ 1
KSR1-203ENST00000398985 ABCC5O15440 1437 aa21.28■■□□□ 1
KSR1-203ENST00000398985 AFAP1Q8N556 730 aa21.27■■□□□ 1
KSR1-203ENST00000398985 DAPK1P53355 1430 aa21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms