RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 NAIPQ13075 1403 aa34.35■■■■□ 3.09
CDH23-206ENST00000398842 DAPK1P53355 1430 aa34.35■■■■□ 3.09
CDH23-206ENST00000398842 AKNAQ7Z591 1439 aa34.34■■■■□ 3.09
CDH23-206ENST00000398842 ABCC5O15440 1437 aa34.31■■■■□ 3.08
CDH23-206ENST00000398842 GCC2Q8IWJ2 1684 aa34.31■■■■□ 3.08
CDH23-206ENST00000398842 CYB5RLQ6IPT4 315 aa34.3■■■■□ 3.08
CDH23-206ENST00000398842 PREX2Q70Z35 1606 aa34.28■■■■□ 3.08
CDH23-206ENST00000398842 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.27■■■■□ 3.08
CDH23-206ENST00000398842 TTC37Q6PGP7 1564 aa34.26■■■■□ 3.07
CDH23-206ENST00000398842 CDC42BPBQ9Y5S2 1711 aa34.26■■■■□ 3.07
CDH23-206ENST00000398842 CHIC2Q9UKJ5 165 aa34.24■■■■□ 3.07
CDH23-206ENST00000398842 ROCK1Q13464 1354 aa34.23■■■■□ 3.07
CDH23-206ENST00000398842 MAPKBP1O60336 1514 aa34.22■■■■□ 3.07
CDH23-206ENST00000398842 CROCC2H7BZ55 1655 aa34.22■■■■□ 3.07
CDH23-206ENST00000398842 ZNF777Q9ULD5 760 aaPredicted RBP34.21■■■■□ 3.07
CDH23-206ENST00000398842 RRP7BPQ9NSQ0 103 aa34.19■■■■□ 3.06
CDH23-206ENST00000398842 MYO5CQ9NQX4 1742 aa34.17■■■■□ 3.06
CDH23-206ENST00000398842 ADGBQ8N7X0 1667 aa34.15■■■■□ 3.06
CDH23-206ENST00000398842 SAMD9LQ8IVG5 1584 aa34.13■■■■□ 3.05
CDH23-206ENST00000398842 KDM6BO15054 1643 aa34.11■■■■□ 3.05
CDH23-206ENST00000398842 KCNH8Q96L42 1107 aa34.11■■■■□ 3.05
CDH23-206ENST00000398842 ADGRL2O95490 1459 aa34.1■■■■□ 3.05
CDH23-206ENST00000398842 ARHGEF5Q12774 1597 aa34.1■■■■□ 3.05
CDH23-206ENST00000398842 WDR7Q9Y4E6 1490 aa34.09■■■■□ 3.05
CDH23-206ENST00000398842 ARHGAP5Q13017 1502 aa34.07■■■■□ 3.04
CDH23-206ENST00000398842 SHANK2Q9UPX8 1470 aa34.07■■■■□ 3.04
CDH23-206ENST00000398842 MBD5Q9P267 1494 aa34.06■■■■□ 3.04
CDH23-206ENST00000398842 NPM1P06748 294 aaKnown RBP eCLIP34.06■■■■□ 3.04
CDH23-206ENST00000398842 DNAJC5Q9H3Z4 198 aa34.06■■■■□ 3.04
CDH23-206ENST00000398842 NCOA1Q15788 1441 aa34.04■■■■□ 3.04
CDH23-206ENST00000398842 PLCH2O75038 1416 aa34.03■■■■□ 3.04
CDH23-206ENST00000398842 ASXL2Q76L83 1435 aa33.98■■■■□ 3.03
CDH23-206ENST00000398842 HNRNPMP52272 730 aaKnown RBP eCLIP33.97■■■■□ 3.03
CDH23-206ENST00000398842 C9orf84Q5VXU9 1444 aa33.97■■■■□ 3.03
CDH23-206ENST00000398842 CCDC141Q6ZP82 1450 aa33.96■■■■□ 3.03
CDH23-206ENST00000398842 ANKRD30AQ9BXX3 1397 aa33.96■■■■□ 3.03
CDH23-206ENST00000398842 ARAP3Q8WWN8 1544 aa33.96■■■■□ 3.03
CDH23-206ENST00000398842 PLEKHH2Q8IVE3 1493 aa33.95■■■■□ 3.03
CDH23-206ENST00000398842 SYCP2Q9BX26 1530 aa33.95■■■■□ 3.03
CDH23-206ENST00000398842 ABCA9Q8IUA7 1624 aa33.95■■■■□ 3.02
CDH23-206ENST00000398842 ACIN1Q9UKV3 1341 aaKnown RBP33.95■■■■□ 3.02
CDH23-206ENST00000398842 KIAA1107Q9UPP5 1409 aa33.94■■■■□ 3.02
CDH23-206ENST00000398842 RSPH4AQ5TD94 716 aa33.94■■■■□ 3.02
CDH23-206ENST00000398842 TSPY4P0CV99 314 aa33.9■■■■□ 3.02
CDH23-206ENST00000398842 TSPY10P0CW01 314 aa33.9■■■■□ 3.02
CDH23-206ENST00000398842 EFCAB2Q5VUJ9 269 aa33.88■■■■□ 3.01
CDH23-206ENST00000398842 MAST1Q9Y2H9 1570 aa33.87■■■■□ 3.01
CDH23-206ENST00000398842 DENND4BO75064 1496 aaPredicted RBP33.86■■■■□ 3.01
CDH23-206ENST00000398842 ABCC1P33527 1531 aa33.85■■■■□ 3.01
CDH23-206ENST00000398842 ARHGEF12Q9NZN5 1544 aa33.85■■■■□ 3.01
CDH23-206ENST00000398842 TRIM52Q96A61 297 aa33.85■■■■□ 3.01
CDH23-206ENST00000398842 SIN3AQ96ST3 1273 aa33.83■■■■□ 3.01
CDH23-206ENST00000398842 ANKRD50Q9ULJ7 1429 aa33.8■■■■□ 3
CDH23-206ENST00000398842 MPHOSPH9Q99550 1183 aa33.77■■■■□ 3
CDH23-206ENST00000398842 KIF15Q9NS87 1388 aa33.76■■■□□ 2.99
CDH23-206ENST00000398842 TIMELESSQ9UNS1 1208 aa33.74■■■□□ 2.99
CDH23-206ENST00000398842 NEUROD1Q13562 356 aa33.73■■■□□ 2.99
CDH23-206ENST00000398842 PLXNC1O60486 1568 aa33.73■■■□□ 2.99
CDH23-206ENST00000398842 FANCAO15360 1455 aa33.72■■■□□ 2.99
CDH23-206ENST00000398842 PZPP20742 1482 aa33.7■■■□□ 2.98
CDH23-206ENST00000398842 TRAPPC8Q9Y2L5 1435 aa33.68■■■□□ 2.98
CDH23-206ENST00000398842 ZNF316A6NFI3 1004 aaPredicted RBP33.65■■■□□ 2.98
CDH23-206ENST00000398842 KDM5DQ9BY66 1539 aa33.63■■■□□ 2.97
CDH23-206ENST00000398842 SLC4A1APQ9BWU0 796 aaKnown RBP33.6■■■□□ 2.97
CDH23-206ENST00000398842 CD109Q6YHK3 1445 aa33.58■■■□□ 2.97
CDH23-206ENST00000398842 ADGRL1O94910 1474 aa33.58■■■□□ 2.97
CDH23-206ENST00000398842 DUOX2Q9NRD8 1548 aa33.57■■■□□ 2.96
CDH23-206ENST00000398842 RTEL1-TNFRSF6BF6WH68 1400 aa33.57■■■□□ 2.96
CDH23-206ENST00000398842 ANKRD30BQ9BXX2 1392 aa33.56■■■□□ 2.96
CDH23-206ENST00000398842 CFAP74Q9C0B2 1584 aa33.56■■■□□ 2.96
CDH23-206ENST00000398842 ZFYVE16Q7Z3T8 1539 aa33.54■■■□□ 2.96
CDH23-206ENST00000398842 FOXD1Q16676 465 aa33.54■■■□□ 2.96
CDH23-206ENST00000398842 TONSLQ96HA7 1378 aa33.54■■■□□ 2.96
CDH23-206ENST00000398842 SCAPERQ9BY12 1400 aa33.53■■■□□ 2.96
CDH23-206ENST00000398842 FAM69CQ0P6D2 419 aa33.52■■■□□ 2.96
CDH23-206ENST00000398842 AFAP1Q8N556 730 aa33.52■■■□□ 2.96
CDH23-206ENST00000398842 NUP155O75694 1391 aa33.52■■■□□ 2.96
CDH23-206ENST00000398842 UNC13BO14795 1591 aa33.51■■■□□ 2.96
CDH23-206ENST00000398842 SPAG9O60271 1321 aaKnown RBP33.51■■■□□ 2.95
CDH23-206ENST00000398842 INO80Q9ULG1 1556 aaPredicted RBP33.51■■■□□ 2.95
CDH23-206ENST00000398842 PPP1R15AO75807 674 aaPredicted RBP33.5■■■□□ 2.95
CDH23-206ENST00000398842 ERBINQ96RT1 1412 aa33.49■■■□□ 2.95
CDH23-206ENST00000398842 DIP2BQ9P265 1576 aa33.49■■■□□ 2.95
CDH23-206ENST00000398842 GLI2P10070 1586 aa33.46■■■□□ 2.95
CDH23-206ENST00000398842 ATP7AQ04656 1500 aa33.45■■■□□ 2.95
CDH23-206ENST00000398842 MAP3K4Q9Y6R4 1608 aa33.45■■■□□ 2.95
CDH23-206ENST00000398842 RPRD2Q5VT52 1461 aaKnown RBP33.44■■■□□ 2.94
CDH23-206ENST00000398842 PKD2Q13563 968 aa33.42■■■□□ 2.94
CDH23-206ENST00000398842 FAM135AQ9P2D6 1515 aa33.41■■■□□ 2.94
CDH23-206ENST00000398842 MAGI2Q86UL8 1455 aa33.4■■■□□ 2.94
CDH23-206ENST00000398842 NEO1Q92859 1461 aa33.39■■■□□ 2.94
CDH23-206ENST00000398842 ZNF518AQ6AHZ1 1483 aa33.39■■■□□ 2.94
CDH23-206ENST00000398842 IQGAP3Q86VI3 1631 aa33.37■■■□□ 2.93
CDH23-206ENST00000398842 KIF13AQ9H1H9 1805 aa33.36■■■□□ 2.93
CDH23-206ENST00000398842 KIDINS220Q9ULH0 1771 aa33.35■■■□□ 2.93
CDH23-206ENST00000398842 KDM5CP41229 1560 aa33.34■■■□□ 2.93
CDH23-206ENST00000398842 POGZQ7Z3K3 1410 aa33.34■■■□□ 2.93
CDH23-206ENST00000398842 DIEXFQ68CQ4 756 aaKnown RBP33.33■■■□□ 2.93
CDH23-206ENST00000398842 TSPOAP1O95153 1857 aa33.3■■■□□ 2.92
CDH23-206ENST00000398842 TEX14Q8IWB6 1497 aa33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms