RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 GGT6Q6P531 493 aa15.16■□□□□ 0.02
PCDHGA8-201ENST00000398604 ABCA10Q8WWZ4 1543 aa15.15■□□□□ 0.02
PCDHGA8-201ENST00000398604 DCAF11Q8TEB1 546 aa15.15■□□□□ 0.02
PCDHGA8-201ENST00000398604 U2SURPO15042 1029 aaKnown RBP15.15■□□□□ 0.02
PCDHGA8-201ENST00000398604 PRXQ9BXM0 1461 aa15.15■□□□□ 0.02
PCDHGA8-201ENST00000398604 FRAT1Q92837 279 aaPredicted RBP15.14■□□□□ 0.01
PCDHGA8-201ENST00000398604 TAOK2Q9UL54 1235 aa15.13■□□□□ 0.01
PCDHGA8-201ENST00000398604 FHOD3Q2V2M9 1422 aa15.13■□□□□ 0.01
PCDHGA8-201ENST00000398604 FOXD1Q16676 465 aa15.12■□□□□ 0.01
PCDHGA8-201ENST00000398604 ARHGAP35Q9NRY4 1499 aa15.11■□□□□ 0.01
PCDHGA8-201ENST00000398604 EFCAB2Q5VUJ9 269 aa15.11■□□□□ 0.01
PCDHGA8-201ENST00000398604 CDCA8Q53HL2 280 aa15.11■□□□□ 0.01
PCDHGA8-201ENST00000398604 ARAP1Q96P48 1450 aa15.09■□□□□ 0.01
PCDHGA8-201ENST00000398604 RGS3P49796 1198 aa15.09■□□□□ 0.01
PCDHGA8-201ENST00000398604 CCDC18Q5T9S5 1454 aa15.09■□□□□ 0.01
PCDHGA8-201ENST00000398604 FTSJ3Q8IY81 847 aaKnown RBP15.09■□□□□ 0.01
PCDHGA8-201ENST00000398604 STK26Q9P289 416 aa15.09■□□□□ 0.01
PCDHGA8-201ENST00000398604 MAPK8IP3Q9UPT6 1336 aa15.08■□□□□ 0
PCDHGA8-201ENST00000398604 BIVM-ERCC5R4GMW8 1640 aa15.08■□□□□ 0
PCDHGA8-201ENST00000398604 RSPH4AQ5TD94 716 aa15.07■□□□□ 0
PCDHGA8-201ENST00000398604 URB2Q14146 1524 aaKnown RBP15.06■□□□□ 0
PCDHGA8-201ENST00000398604 NUDCQ9Y266 331 aa15.05■□□□□ 0
PCDHGA8-201ENST00000398604 SRPK2P78362 688 aaKnown RBP15.05■□□□□ -0
PCDHGA8-201ENST00000398604 SNAPC4Q5SXM2 1469 aa15.04■□□□□ -0
PCDHGA8-201ENST00000398604 TULP1O00294 542 aaPredicted RBP15.04■□□□□ -0
PCDHGA8-201ENST00000398604 NPHP1O15259 732 aa15.04■□□□□ -0
PCDHGA8-201ENST00000398604 MAGI1Q96QZ7 1491 aaPredicted RBP15.02■□□□□ -0
PCDHGA8-201ENST00000398604 NCLP19338 710 aaKnown RBP15.02□□□□□ -0.01
PCDHGA8-201ENST00000398604 EFCAB5A4FU69 1503 aa14.99□□□□□ -0.01
PCDHGA8-201ENST00000398604 PKD2Q13563 968 aa14.99□□□□□ -0.01
PCDHGA8-201ENST00000398604 ANP32EQ9BTT0 268 aa14.99□□□□□ -0.01
PCDHGA8-201ENST00000398604 B4GALNT3Q6L9W6 998 aa14.98□□□□□ -0.01
PCDHGA8-201ENST00000398604 CUL7Q14999 1698 aa14.98□□□□□ -0.01
PCDHGA8-201ENST00000398604 SYNJ2O15056 1496 aa14.98□□□□□ -0.01
PCDHGA8-201ENST00000398604 KIAA0586Q9BVV6 1533 aa14.98□□□□□ -0.01
PCDHGA8-201ENST00000398604 KANK1Q14678 1352 aa14.97□□□□□ -0.01
PCDHGA8-201ENST00000398604 DHX57Q6P158 1386 aaKnown RBP14.96□□□□□ -0.01
PCDHGA8-201ENST00000398604 CYB5RLQ6IPT4 315 aa14.96□□□□□ -0.01
PCDHGA8-201ENST00000398604 PRG4Q92954 1404 aaPredicted RBP14.95□□□□□ -0.02
PCDHGA8-201ENST00000398604 TMF1P82094 1093 aa14.95□□□□□ -0.02
PCDHGA8-201ENST00000398604 OS9Q13438 667 aaPredicted RBP14.94□□□□□ -0.02
PCDHGA8-201ENST00000398604 NUTM2DQ5VT03 806 aaPredicted RBP14.94□□□□□ -0.02
PCDHGA8-201ENST00000398604 RAB3GAP2Q9H2M9 1393 aa14.94□□□□□ -0.02
PCDHGA8-201ENST00000398604 BECN1Q14457 450 aa14.94□□□□□ -0.02
PCDHGA8-201ENST00000398604 PAK3O75914 559 aaPredicted RBP14.94□□□□□ -0.02
PCDHGA8-201ENST00000398604 ANKRD30AQ9BXX3 1397 aa14.93□□□□□ -0.02
PCDHGA8-201ENST00000398604 MORC1Q86VD1 984 aa14.93□□□□□ -0.02
PCDHGA8-201ENST00000398604 CASKIN1Q8WXD9 1431 aa14.93□□□□□ -0.02
PCDHGA8-201ENST00000398604 SETD5Q9C0A6 1442 aa14.92□□□□□ -0.02
PCDHGA8-201ENST00000398604 NUTM2FA1L443 756 aa14.92□□□□□ -0.02
PCDHGA8-201ENST00000398604 APBB1O00213 710 aa14.91□□□□□ -0.02
PCDHGA8-201ENST00000398604 CDK11BP21127 795 aaKnown RBP14.91□□□□□ -0.02
PCDHGA8-201ENST00000398604 ZNF330Q9Y3S2 320 aaPredicted RBP14.9□□□□□ -0.02
PCDHGA8-201ENST00000398604 HSPA5P11021 654 aaKnown RBP14.89□□□□□ -0.03
PCDHGA8-201ENST00000398604 NAP1L2Q9ULW6 460 aaPredicted RBP14.89□□□□□ -0.03
PCDHGA8-201ENST00000398604 FGD1P98174 961 aa14.89□□□□□ -0.03
PCDHGA8-201ENST00000398604 KIF3BO15066 747 aa14.88□□□□□ -0.03
PCDHGA8-201ENST00000398604 GRIN2AQ12879 1464 aa14.88□□□□□ -0.03
PCDHGA8-201ENST00000398604 KCNJ4P48050 445 aa14.87□□□□□ -0.03
PCDHGA8-201ENST00000398604 TSHZ2Q9NRE2 1034 aa14.87□□□□□ -0.03
PCDHGA8-201ENST00000398604 FYCO1Q9BQS8 1478 aa14.86□□□□□ -0.03
PCDHGA8-201ENST00000398604 PLCB2Q00722 1185 aa14.86□□□□□ -0.03
PCDHGA8-201ENST00000398604 GOLGA6L22H0YM25 854 aa14.86□□□□□ -0.03
PCDHGA8-201ENST00000398604 RRBP1Q9P2E9 1410 aaKnown RBP14.86□□□□□ -0.03
PCDHGA8-201ENST00000398604 SPAG9O60271 1321 aaKnown RBP14.86□□□□□ -0.03
PCDHGA8-201ENST00000398604 HDGFP51858 240 aaKnown RBP14.86□□□□□ -0.03
PCDHGA8-201ENST00000398604 HNRNPMP52272 730 aaKnown RBP eCLIP14.86□□□□□ -0.03
PCDHGA8-201ENST00000398604 U2AF1L5P0DN76 240 aaPredicted RBP14.85□□□□□ -0.03
PCDHGA8-201ENST00000398604 U2AF1Q01081 240 aaKnown RBP eCLIP14.85□□□□□ -0.03
PCDHGA8-201ENST00000398604 TIMELESSQ9UNS1 1208 aa14.85□□□□□ -0.03
PCDHGA8-201ENST00000398604 PHLDB1Q86UU1 1377 aa14.85□□□□□ -0.03
PCDHGA8-201ENST00000398604 IQGAP2Q13576 1575 aa14.84□□□□□ -0.03
PCDHGA8-201ENST00000398604 CASC1Q6TDU7 716 aa14.84□□□□□ -0.03
PCDHGA8-201ENST00000398604 ZRSR1Q15695 479 aaKnown RBP14.84□□□□□ -0.03
PCDHGA8-201ENST00000398604 PPP4R2Q9NY27 417 aa14.84□□□□□ -0.03
PCDHGA8-201ENST00000398604 DDRGK1Q96HY6 314 aa14.83□□□□□ -0.03
PCDHGA8-201ENST00000398604 NUP155O75694 1391 aa14.83□□□□□ -0.03
PCDHGA8-201ENST00000398604 ZNF608Q9ULD9 1512 aaPredicted RBP14.83□□□□□ -0.04
PCDHGA8-201ENST00000398604 TRIM44Q96DX7 344 aaPredicted RBP14.83□□□□□ -0.04
PCDHGA8-201ENST00000398604 RBM19Q9Y4C8 960 aaKnown RBP14.83□□□□□ -0.04
PCDHGA8-201ENST00000398604 CCER2I3L3R5 266 aa14.83□□□□□ -0.04
PCDHGA8-201ENST00000398604 GOLGA2Q08379 1002 aa14.83□□□□□ -0.04
PCDHGA8-201ENST00000398604 CSB-PGBD3P0DP91 1061 aa14.82□□□□□ -0.04
PCDHGA8-201ENST00000398604 MPHOSPH9Q99550 1183 aa14.82□□□□□ -0.04
PCDHGA8-201ENST00000398604 WDR62O43379 1518 aa14.82□□□□□ -0.04
PCDHGA8-201ENST00000398604 SPRYD3Q8NCJ5 442 aa14.81□□□□□ -0.04
PCDHGA8-201ENST00000398604 LRRC9Q6ZRR7 1453 aa14.81□□□□□ -0.04
PCDHGA8-201ENST00000398604 RTF1Q92541 710 aaKnown RBP14.8□□□□□ -0.04
PCDHGA8-201ENST00000398604 PRDM2Q13029 1718 aa14.8□□□□□ -0.04
PCDHGA8-201ENST00000398604 PTMAP06454 111 aaKnown RBP14.8□□□□□ -0.04
PCDHGA8-201ENST00000398604 MYOM3Q5VTT5 1437 aa14.78□□□□□ -0.04
PCDHGA8-201ENST00000398604 HDGFL2Q7Z4V5 671 aaPredicted RBP14.77□□□□□ -0.04
PCDHGA8-201ENST00000398604 LTV1Q96GA3 475 aaPredicted RBP14.77□□□□□ -0.05
PCDHGA8-201ENST00000398604 UACAQ9BZF9 1416 aa14.76□□□□□ -0.05
PCDHGA8-201ENST00000398604 TIAM1Q13009 1591 aa14.76□□□□□ -0.05
PCDHGA8-201ENST00000398604 KIF21AQ7Z4S6 1674 aa14.76□□□□□ -0.05
PCDHGA8-201ENST00000398604 L3MBTL2Q969R5 705 aa14.76□□□□□ -0.05
PCDHGA8-201ENST00000398604 ISY1Q9ULR0 285 aaKnown RBP14.76□□□□□ -0.05
PCDHGA8-201ENST00000398604 CCDC9Q9Y3X0 531 aaKnown RBP14.76□□□□□ -0.05
PCDHGA8-201ENST00000398604 PNNQ9H307 717 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms