RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 APBB1O00213 710 aa14.95□□□□□ -0.02
TMF1-201ENST00000398559 PTMSP20962 102 aa14.95□□□□□ -0.02
TMF1-201ENST00000398559 RCAN3Q9UKA8 241 aa14.95□□□□□ -0.02
TMF1-201ENST00000398559 KTN1Q86UP2 1357 aaKnown RBP14.94□□□□□ -0.02
TMF1-201ENST00000398559 TSHZ2Q9NRE2 1034 aa14.93□□□□□ -0.02
TMF1-201ENST00000398559 TCERG1O14776 1098 aaKnown RBP14.93□□□□□ -0.02
TMF1-201ENST00000398559 KIAA2012Q0VF49 1180 aa14.93□□□□□ -0.02
TMF1-201ENST00000398559 SOX12O15370 315 aa14.93□□□□□ -0.02
TMF1-201ENST00000398559 TIMELESSQ9UNS1 1208 aa14.93□□□□□ -0.02
TMF1-201ENST00000398559 SRPK2P78362 688 aaKnown RBP14.92□□□□□ -0.02
TMF1-201ENST00000398559 SETD5Q9C0A6 1442 aa14.92□□□□□ -0.02
TMF1-201ENST00000398559 GNL2Q13823 731 aaKnown RBP14.91□□□□□ -0.02
TMF1-201ENST00000398559 KIAA1211Q6ZU35 1233 aa14.9□□□□□ -0.02
TMF1-201ENST00000398559 IPO8O15397 1037 aaKnown RBP14.9□□□□□ -0.02
TMF1-201ENST00000398559 ITPRIPQ8IWB1 547 aa14.9□□□□□ -0.02
TMF1-201ENST00000398559 GOLGA6L3A6NEY3 463 aa14.89□□□□□ -0.03
TMF1-201ENST00000398559 RWDD1Q9H446 243 aaPredicted RBP14.89□□□□□ -0.03
TMF1-201ENST00000398559 FHAD1B1AJZ9 1412 aa14.89□□□□□ -0.03
TMF1-201ENST00000398559 SAFB2Q14151 953 aaKnown RBP eCLIP14.89□□□□□ -0.03
TMF1-201ENST00000398559 IPO9Q96P70 1041 aaKnown RBP14.89□□□□□ -0.03
TMF1-201ENST00000398559 BAZ1BQ9UIG0 1483 aaKnown RBP14.89□□□□□ -0.03
TMF1-201ENST00000398559 CLSTN1O94985 981 aa14.88□□□□□ -0.03
TMF1-201ENST00000398559 RTF1Q92541 710 aaKnown RBP14.88□□□□□ -0.03
TMF1-201ENST00000398559 MFAP1P55081 439 aaKnown RBP14.87□□□□□ -0.03
TMF1-201ENST00000398559 KANK1Q14678 1352 aa14.87□□□□□ -0.03
TMF1-201ENST00000398559 FOXD1Q16676 465 aa14.86□□□□□ -0.03
TMF1-201ENST00000398559 SYAP1Q96A49 352 aaPredicted RBP14.86□□□□□ -0.03
TMF1-201ENST00000398559 EIF4G1Q04637 1599 aaKnown RBP14.85□□□□□ -0.03
TMF1-201ENST00000398559 PMFBP1Q8TBY8 1022 aa14.84□□□□□ -0.03
TMF1-201ENST00000398559 RB1CC1Q8TDY2 1594 aa14.84□□□□□ -0.03
TMF1-201ENST00000398559 ARHGAP35Q9NRY4 1499 aa14.83□□□□□ -0.03
TMF1-201ENST00000398559 RALBP1Q15311 655 aa14.83□□□□□ -0.03
TMF1-201ENST00000398559 ISY1Q9ULR0 285 aaKnown RBP14.82□□□□□ -0.04
TMF1-201ENST00000398559 ROCK2O75116 1388 aaKnown RBP14.82□□□□□ -0.04
TMF1-201ENST00000398559 U2AF1L5P0DN76 240 aaPredicted RBP14.82□□□□□ -0.04
TMF1-201ENST00000398559 U2AF1Q01081 240 aaKnown RBP eCLIP14.82□□□□□ -0.04
TMF1-201ENST00000398559 PKD2Q13563 968 aa14.81□□□□□ -0.04
TMF1-201ENST00000398559 FOXD4L1Q9NU39 408 aa14.81□□□□□ -0.04
TMF1-201ENST00000398559 HTATSF1O43719 755 aaKnown RBP14.81□□□□□ -0.04
TMF1-201ENST00000398559 STK26Q9P289 416 aa14.8□□□□□ -0.04
TMF1-201ENST00000398559 NCBP3Q53F19 620 aaKnown RBP14.8□□□□□ -0.04
TMF1-201ENST00000398559 HDGFL2Q7Z4V5 671 aaPredicted RBP14.8□□□□□ -0.04
TMF1-201ENST00000398559 TNNT3P45378 269 aaPredicted RBP14.79□□□□□ -0.04
TMF1-201ENST00000398559 CALD1Q05682 793 aaKnown RBP14.79□□□□□ -0.04
TMF1-201ENST00000398559 NOC3LQ8WTT2 800 aaKnown RBP14.79□□□□□ -0.04
TMF1-201ENST00000398559 SOGA1O94964 1423 aa14.79□□□□□ -0.04
TMF1-201ENST00000398559 TPM4P67936 248 aa14.79□□□□□ -0.04
TMF1-201ENST00000398559 HSP90B1P14625 803 aaKnown RBP14.78□□□□□ -0.04
TMF1-201ENST00000398559 RAB3GAP2Q9H2M9 1393 aa14.77□□□□□ -0.04
TMF1-201ENST00000398559 TRIM6-TRIM34B2RNG4 842 aa14.77□□□□□ -0.05
TMF1-201ENST00000398559 SMC4Q9NTJ3 1288 aa14.77□□□□□ -0.05
TMF1-201ENST00000398559 NOL8Q76FK4 1167 aaKnown RBP14.76□□□□□ -0.05
TMF1-201ENST00000398559 KANK4Q5T7N3 995 aaPredicted RBP14.76□□□□□ -0.05
TMF1-201ENST00000398559 CARMIL1Q5VZK9 1371 aa14.76□□□□□ -0.05
TMF1-201ENST00000398559 VPS8Q8N3P4 1428 aa14.75□□□□□ -0.05
TMF1-201ENST00000398559 CCDC146Q8IYE0 955 aa14.75□□□□□ -0.05
TMF1-201ENST00000398559 MPHOSPH9Q99550 1183 aa14.75□□□□□ -0.05
TMF1-201ENST00000398559 HDGFP51858 240 aaKnown RBP14.74□□□□□ -0.05
TMF1-201ENST00000398559 CLUAP1Q96AJ1 413 aa14.74□□□□□ -0.05
TMF1-201ENST00000398559 CSPP1Q1MSJ5 1256 aa14.74□□□□□ -0.05
TMF1-201ENST00000398559 MLECQ14165 292 aa14.73□□□□□ -0.05
TMF1-201ENST00000398559 CUX2O14529 1486 aa14.72□□□□□ -0.05
TMF1-201ENST00000398559 GOLGA6L1Q8N7Z2 621 aa14.72□□□□□ -0.05
TMF1-201ENST00000398559 FOXD4L5Q5VV16 416 aaPredicted RBP14.72□□□□□ -0.05
TMF1-201ENST00000398559 FOXD4L4Q8WXT5 416 aaPredicted RBP14.72□□□□□ -0.05
TMF1-201ENST00000398559 GPATCH3Q96I76 525 aa14.72□□□□□ -0.05
TMF1-201ENST00000398559 CENPJQ9HC77 1338 aaPredicted RBP14.71□□□□□ -0.05
TMF1-201ENST00000398559 HSP90AA2PQ14568 343 aaPredicted RBP14.71□□□□□ -0.05
TMF1-201ENST00000398559 PHF14O94880 888 aa14.7□□□□□ -0.06
TMF1-201ENST00000398559 STK31Q9BXU1 1019 aa14.7□□□□□ -0.06
TMF1-201ENST00000398559 ZNF330Q9Y3S2 320 aaPredicted RBP14.7□□□□□ -0.06
TMF1-201ENST00000398559 PAK3O75914 559 aaPredicted RBP14.69□□□□□ -0.06
TMF1-201ENST00000398559 HMMRO75330 724 aa14.69□□□□□ -0.06
TMF1-201ENST00000398559 GGT6Q6P531 493 aa14.69□□□□□ -0.06
TMF1-201ENST00000398559 DDX11L8A8MPP1 907 aa14.69□□□□□ -0.06
TMF1-201ENST00000398559 SLC4A10Q6U841 1118 aa14.68□□□□□ -0.06
TMF1-201ENST00000398559 ST18O60284 1047 aa14.68□□□□□ -0.06
TMF1-201ENST00000398559 CHMP3Q9Y3E7 222 aa14.68□□□□□ -0.06
TMF1-201ENST00000398559 SLC4A3P48751 1232 aa14.68□□□□□ -0.06
TMF1-201ENST00000398559 GORABQ5T7V8 394 aa14.68□□□□□ -0.06
TMF1-201ENST00000398559 SPAG9O60271 1321 aaKnown RBP14.68□□□□□ -0.06
TMF1-201ENST00000398559 CREBRFQ8IUR6 639 aa14.68□□□□□ -0.06
TMF1-201ENST00000398559 NUP155O75694 1391 aa14.67□□□□□ -0.06
TMF1-201ENST00000398559 PDE3BQ13370 1112 aa14.67□□□□□ -0.06
TMF1-201ENST00000398559 A0A0U1RQG5 324 aaPredicted RBP14.67□□□□□ -0.06
TMF1-201ENST00000398559 EIF3AQ14152 1382 aaKnown RBP14.67□□□□□ -0.06
TMF1-201ENST00000398559 RSPH6AQ9H0K4 717 aa14.67□□□□□ -0.06
TMF1-201ENST00000398559 USP35Q9P2H5 1018 aa14.67□□□□□ -0.06
TMF1-201ENST00000398559 ERCC6Q03468 1493 aa14.66□□□□□ -0.06
TMF1-201ENST00000398559 CCDC34Q96HJ3 373 aa14.66□□□□□ -0.06
TMF1-201ENST00000398559 NLRP13Q86W25 1043 aa14.65□□□□□ -0.06
TMF1-201ENST00000398559 GSE1Q14687 1217 aa14.65□□□□□ -0.06
TMF1-201ENST00000398559 PDE4AP27815 886 aa14.65□□□□□ -0.06
TMF1-201ENST00000398559 KIF16BQ96L93 1317 aa14.65□□□□□ -0.06
TMF1-201ENST00000398559 BAZ1AQ9NRL2 1556 aaPredicted RBP14.65□□□□□ -0.07
TMF1-201ENST00000398559 PDE4CQ08493 712 aa14.64□□□□□ -0.07
TMF1-201ENST00000398559 FAM161AQ3B820 660 aa14.63□□□□□ -0.07
TMF1-201ENST00000398559 ABCC8Q09428 1581 aa14.63□□□□□ -0.07
TMF1-201ENST00000398559 RASSF8Q8NHQ8 419 aa14.63□□□□□ -0.07
TMF1-201ENST00000398559 CENPQQ7L2Z9 268 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms