RNA–Protein interactions for RNA: ENST00000398469.5

KRT42P-201, Transcript of keratin 42 pseudogene, humanhuman

TSL 2 BASIC

Gene KRT42P, Length 2,864 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT42P-201ENST00000398469 POLR3GLQ9BT43 218 aa18.36■□□□□ 0.53
KRT42P-201ENST00000398469 IQGAP2Q13576 1575 aa18.34■□□□□ 0.53
KRT42P-201ENST00000398469 FAM9BQ8IZU0 186 aa18.33■□□□□ 0.53
KRT42P-201ENST00000398469 ARHGEF11O15085 1522 aa18.33■□□□□ 0.53
KRT42P-201ENST00000398469 EIF4G2P78344 907 aaKnown RBP eCLIP18.33■□□□□ 0.52
KRT42P-201ENST00000398469 SLC4A1APQ9BWU0 796 aaKnown RBP18.32■□□□□ 0.52
KRT42P-201ENST00000398469 AMER1Q5JTC6 1135 aaPredicted RBP18.31■□□□□ 0.52
KRT42P-201ENST00000398469 PBRM1Q86U86 1689 aa18.31■□□□□ 0.52
KRT42P-201ENST00000398469 PHF23Q9BUL5 403 aaPredicted RBP18.3■□□□□ 0.52
KRT42P-201ENST00000398469 HECW1Q76N89 1606 aa18.29■□□□□ 0.52
KRT42P-201ENST00000398469 ADAMTS12P58397 1594 aa18.27■□□□□ 0.52
KRT42P-201ENST00000398469 TCOF1Q13428 1488 aaKnown RBP18.27■□□□□ 0.51
KRT42P-201ENST00000398469 PRG4Q92954 1404 aaPredicted RBP18.26■□□□□ 0.51
KRT42P-201ENST00000398469 WDR62O43379 1518 aa18.26■□□□□ 0.51
KRT42P-201ENST00000398469 ABCC5O15440 1437 aa18.25■□□□□ 0.51
KRT42P-201ENST00000398469 DAPK1P53355 1430 aa18.24■□□□□ 0.51
KRT42P-201ENST00000398469 CFDP1Q9UEE9 299 aaPredicted RBP18.23■□□□□ 0.51
KRT42P-201ENST00000398469 RBM19Q9Y4C8 960 aaKnown RBP18.23■□□□□ 0.51
KRT42P-201ENST00000398469 MRC2Q9UBG0 1479 aa18.22■□□□□ 0.51
KRT42P-201ENST00000398469 NUP153P49790 1475 aaKnown RBP18.22■□□□□ 0.51
KRT42P-201ENST00000398469 DISP1Q96F81 1524 aa18.22■□□□□ 0.51
KRT42P-201ENST00000398469 MRS2Q9HD23 443 aa18.22■□□□□ 0.51
KRT42P-201ENST00000398469 CHMP7Q8WUX9 453 aaPredicted RBP18.21■□□□□ 0.51
KRT42P-201ENST00000398469 ANKRD30BQ9BXX2 1392 aa18.21■□□□□ 0.51
KRT42P-201ENST00000398469 PLB1Q6P1J6 1458 aa18.2■□□□□ 0.5
KRT42P-201ENST00000398469 PRKRIP1Q9H875 184 aaPredicted RBP18.2■□□□□ 0.5
KRT42P-201ENST00000398469 GCC2Q8IWJ2 1684 aa18.2■□□□□ 0.5
KRT42P-201ENST00000398469 MIA2Q96PC5 1412 aa18.19■□□□□ 0.5
KRT42P-201ENST00000398469 CCDC7Q96M83 1385 aa18.19■□□□□ 0.5
KRT42P-201ENST00000398469 KIF7Q2M1P5 1343 aa18.18■□□□□ 0.5
KRT42P-201ENST00000398469 CNTLNQ9NXG0 1405 aa18.16■□□□□ 0.5
KRT42P-201ENST00000398469 PKD2Q13563 968 aa18.15■□□□□ 0.5
KRT42P-201ENST00000398469 KIAA0556O60303 1618 aa18.14■□□□□ 0.49
KRT42P-201ENST00000398469 CDK11AQ9UQ88 783 aaPredicted RBP18.14■□□□□ 0.49
KRT42P-201ENST00000398469 KDM2AQ9Y2K7 1162 aa18.14■□□□□ 0.49
KRT42P-201ENST00000398469 KIAA0586Q9BVV6 1533 aa18.13■□□□□ 0.49
KRT42P-201ENST00000398469 RPRD2Q5VT52 1461 aaKnown RBP18.12■□□□□ 0.49
KRT42P-201ENST00000398469 NCOA1Q15788 1441 aa18.12■□□□□ 0.49
KRT42P-201ENST00000398469 GRIN2AQ12879 1464 aa18.11■□□□□ 0.49
KRT42P-201ENST00000398469 TEX14Q8IWB6 1497 aa18.11■□□□□ 0.49
KRT42P-201ENST00000398469 ANP32EQ9BTT0 268 aa18.1■□□□□ 0.49
KRT42P-201ENST00000398469 AKNAQ7Z591 1439 aa18.1■□□□□ 0.49
KRT42P-201ENST00000398469 B4GALNT3Q6L9W6 998 aa18.1■□□□□ 0.49
KRT42P-201ENST00000398469 JPH4Q96JJ6 628 aa18.09■□□□□ 0.49
KRT42P-201ENST00000398469 IFT140Q96RY7 1462 aa18.09■□□□□ 0.49
KRT42P-201ENST00000398469 MYT1Q01538 1121 aa18.09■□□□□ 0.49
KRT42P-201ENST00000398469 KIF14Q15058 1648 aa18.08■□□□□ 0.49
KRT42P-201ENST00000398469 CAMSAP2Q08AD1 1489 aa18.08■□□□□ 0.49
KRT42P-201ENST00000398469 RAPGEF6Q8TEU7 1601 aa18.08■□□□□ 0.48
KRT42P-201ENST00000398469 PZPP20742 1482 aa18.07■□□□□ 0.48
KRT42P-201ENST00000398469 DNMT1P26358 1616 aaKnown RBP18.07■□□□□ 0.48
KRT42P-201ENST00000398469 HNRNPMP52272 730 aaKnown RBP eCLIP18.07■□□□□ 0.48
KRT42P-201ENST00000398469 ERCC6Q03468 1493 aa18.07■□□□□ 0.48
KRT42P-201ENST00000398469 EIF4G3O43432 1585 aaKnown RBP18.07■□□□□ 0.48
KRT42P-201ENST00000398469 ROCK1Q13464 1354 aa18.07■□□□□ 0.48
KRT42P-201ENST00000398469 GPATCH8Q9UKJ3 1502 aaKnown RBP18.05■□□□□ 0.48
KRT42P-201ENST00000398469 MSH5O43196 834 aa18.05■□□□□ 0.48
KRT42P-201ENST00000398469 TROQ12816 1431 aaPredicted RBP18.04■□□□□ 0.48
KRT42P-201ENST00000398469 SPATA31E1Q6ZUB1 1445 aa18.04■□□□□ 0.48
KRT42P-201ENST00000398469 CEP170Q5SW79 1584 aa18.02■□□□□ 0.48
KRT42P-201ENST00000398469 NUP155O75694 1391 aa18.02■□□□□ 0.47
KRT42P-201ENST00000398469 USP47Q96K76 1375 aa18.02■□□□□ 0.47
KRT42P-201ENST00000398469 PLEKHD1A6NEE1 506 aa18.01■□□□□ 0.47
KRT42P-201ENST00000398469 SALL2Q9Y467 1007 aaPredicted RBP18■□□□□ 0.47
KRT42P-201ENST00000398469 DCAF11Q8TEB1 546 aa17.98■□□□□ 0.47
KRT42P-201ENST00000398469 RGL3Q3MIN7 710 aa17.98■□□□□ 0.47
KRT42P-201ENST00000398469 CARD11Q9BXL7 1154 aa17.98■□□□□ 0.47
KRT42P-201ENST00000398469 ANKRD50Q9ULJ7 1429 aa17.97■□□□□ 0.47
KRT42P-201ENST00000398469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.97■□□□□ 0.47
KRT42P-201ENST00000398469 KIAA1107Q9UPP5 1409 aa17.96■□□□□ 0.47
KRT42P-201ENST00000398469 ST20-MTHFSA0A0A6YYL1 179 aa17.96■□□□□ 0.47
KRT42P-201ENST00000398469 BCORL1Q5H9F3 1711 aa17.96■□□□□ 0.47
KRT42P-201ENST00000398469 DHX29Q7Z478 1369 aaKnown RBP17.95■□□□□ 0.46
KRT42P-201ENST00000398469 ANKRD30AQ9BXX3 1397 aa17.95■□□□□ 0.46
KRT42P-201ENST00000398469 ZBED9Q6R2W3 1325 aa17.94■□□□□ 0.46
KRT42P-201ENST00000398469 TSPY4P0CV99 314 aa17.93■□□□□ 0.46
KRT42P-201ENST00000398469 TSPY10P0CW01 314 aa17.93■□□□□ 0.46
KRT42P-201ENST00000398469 PPP4R2Q9NY27 417 aa17.92■□□□□ 0.46
KRT42P-201ENST00000398469 SYNJ2O15056 1496 aa17.91■□□□□ 0.46
KRT42P-201ENST00000398469 ATP10BO94823 1461 aa17.91■□□□□ 0.46
KRT42P-201ENST00000398469 C9orf84Q5VXU9 1444 aa17.9■□□□□ 0.46
KRT42P-201ENST00000398469 CARMIL2Q6F5E8 1435 aa17.9■□□□□ 0.46
KRT42P-201ENST00000398469 NBPF1Q3BBV0 1214 aa17.88■□□□□ 0.45
KRT42P-201ENST00000398469 TMC1Q8TDI8 760 aa17.88■□□□□ 0.45
KRT42P-201ENST00000398469 MBD5Q9P267 1494 aa17.87■□□□□ 0.45
KRT42P-201ENST00000398469 KIF15Q9NS87 1388 aa17.87■□□□□ 0.45
KRT42P-201ENST00000398469 MAGI1Q96QZ7 1491 aaPredicted RBP17.86■□□□□ 0.45
KRT42P-201ENST00000398469 PNISRQ8TF01 805 aaKnown RBP17.83■□□□□ 0.45
KRT42P-201ENST00000398469 ADGRL2O95490 1459 aa17.82■□□□□ 0.44
KRT42P-201ENST00000398469 ITSN2Q9NZM3 1697 aa17.82■□□□□ 0.44
KRT42P-201ENST00000398469 CDC42BPAQ5VT25 1732 aa17.82■□□□□ 0.44
KRT42P-201ENST00000398469 TULP1O00294 542 aaPredicted RBP17.81■□□□□ 0.44
KRT42P-201ENST00000398469 ABCC10Q5T3U5 1492 aa17.81■□□□□ 0.44
KRT42P-201ENST00000398469 NUP160Q12769 1436 aa17.81■□□□□ 0.44
KRT42P-201ENST00000398469 ADGBQ8N7X0 1667 aa17.81■□□□□ 0.44
KRT42P-201ENST00000398469 KDM5CP41229 1560 aa17.8■□□□□ 0.44
KRT42P-201ENST00000398469 ROCK2O75116 1388 aaKnown RBP17.8■□□□□ 0.44
KRT42P-201ENST00000398469 CC2D1BQ5T0F9 858 aaKnown RBP17.79■□□□□ 0.44
KRT42P-201ENST00000398469 NUDCQ9Y266 331 aa17.79■□□□□ 0.44
KRT42P-201ENST00000398469 CROCC2H7BZ55 1655 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms