RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 NAIPQ13075 1403 aa10.88□□□□□ -0.67
RGPD1-201ENST00000398193 ARAP3Q8WWN8 1544 aa10.88□□□□□ -0.67
RGPD1-201ENST00000398193 MAST1Q9Y2H9 1570 aa10.88□□□□□ -0.67
RGPD1-201ENST00000398193 PTPRKQ15262 1439 aa10.87□□□□□ -0.67
RGPD1-201ENST00000398193 KDM5BQ9UGL1 1544 aa10.87□□□□□ -0.67
RGPD1-201ENST00000398193 ZCCHC11Q5TAX3 1644 aaKnown RBP10.86□□□□□ -0.67
RGPD1-201ENST00000398193 PLEKHH2Q8IVE3 1493 aa10.86□□□□□ -0.67
RGPD1-201ENST00000398193 ABCC5O15440 1437 aa10.85□□□□□ -0.67
RGPD1-201ENST00000398193 PLEKHD1A6NEE1 506 aa10.84□□□□□ -0.67
RGPD1-201ENST00000398193 MYO5CQ9NQX4 1742 aa10.84□□□□□ -0.67
RGPD1-201ENST00000398193 KDM5DQ9BY66 1539 aa10.82□□□□□ -0.68
RGPD1-201ENST00000398193 ERCC6L2Q5T890 1561 aa10.81□□□□□ -0.68
RGPD1-201ENST00000398193 CDC42BPBQ9Y5S2 1711 aa10.81□□□□□ -0.68
RGPD1-201ENST00000398193 RSPH4AQ5TD94 716 aa10.81□□□□□ -0.68
RGPD1-201ENST00000398193 KIAA1107Q9UPP5 1409 aa10.81□□□□□ -0.68
RGPD1-201ENST00000398193 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.8□□□□□ -0.68
RGPD1-201ENST00000398193 PLXNC1O60486 1568 aa10.8□□□□□ -0.68
RGPD1-201ENST00000398193 SAMD9LQ8IVG5 1584 aa10.79□□□□□ -0.68
RGPD1-201ENST00000398193 ZNF316A6NFI3 1004 aaPredicted RBP10.78□□□□□ -0.68
RGPD1-201ENST00000398193 TTC37Q6PGP7 1564 aa10.78□□□□□ -0.68
RGPD1-201ENST00000398193 ANKRD30AQ9BXX3 1397 aa10.77□□□□□ -0.69
RGPD1-201ENST00000398193 CCDC141Q6ZP82 1450 aa10.77□□□□□ -0.69
RGPD1-201ENST00000398193 CFDP1Q9UEE9 299 aaPredicted RBP10.77□□□□□ -0.69
RGPD1-201ENST00000398193 ITGAEP38570 1179 aa10.76□□□□□ -0.69
RGPD1-201ENST00000398193 CFAP74Q9C0B2 1584 aa10.76□□□□□ -0.69
RGPD1-201ENST00000398193 ABCA9Q8IUA7 1624 aa10.76□□□□□ -0.69
RGPD1-201ENST00000398193 NCOA1Q15788 1441 aa10.75□□□□□ -0.69
RGPD1-201ENST00000398193 MBD5Q9P267 1494 aa10.75□□□□□ -0.69
RGPD1-201ENST00000398193 PLCH2O75038 1416 aa10.75□□□□□ -0.69
RGPD1-201ENST00000398193 KDM6BO15054 1643 aa10.74□□□□□ -0.69
RGPD1-201ENST00000398193 WDR7Q9Y4E6 1490 aa10.74□□□□□ -0.69
RGPD1-201ENST00000398193 C9orf84Q5VXU9 1444 aa10.74□□□□□ -0.69
RGPD1-201ENST00000398193 UNC13BO14795 1591 aa10.73□□□□□ -0.69
RGPD1-201ENST00000398193 ARHGAP5Q13017 1502 aa10.73□□□□□ -0.69
RGPD1-201ENST00000398193 ABCC1P33527 1531 aa10.73□□□□□ -0.69
RGPD1-201ENST00000398193 RTEL1-TNFRSF6BF6WH68 1400 aa10.7□□□□□ -0.7
RGPD1-201ENST00000398193 DENND4BO75064 1496 aaPredicted RBP10.7□□□□□ -0.7
RGPD1-201ENST00000398193 DUOX2Q9NRD8 1548 aa10.7□□□□□ -0.7
RGPD1-201ENST00000398193 ERBINQ96RT1 1412 aa10.69□□□□□ -0.7
RGPD1-201ENST00000398193 OSCARQ8IYS5 282 aa10.69□□□□□ -0.7
RGPD1-201ENST00000398193 PZPP20742 1482 aa10.69□□□□□ -0.7
RGPD1-201ENST00000398193 SYCP2Q9BX26 1530 aa10.68□□□□□ -0.7
RGPD1-201ENST00000398193 MAGI2Q86UL8 1455 aa10.68□□□□□ -0.7
RGPD1-201ENST00000398193 ANKRD50Q9ULJ7 1429 aa10.67□□□□□ -0.7
RGPD1-201ENST00000398193 IQGAP3Q86VI3 1631 aa10.67□□□□□ -0.7
RGPD1-201ENST00000398193 EIF2AK4Q9P2K8 1649 aaKnown RBP10.67□□□□□ -0.7
RGPD1-201ENST00000398193 RPRD2Q5VT52 1461 aaKnown RBP10.66□□□□□ -0.7
RGPD1-201ENST00000398193 ARID3CA6NKF2 412 aa10.66□□□□□ -0.7
RGPD1-201ENST00000398193 ANKRD30BQ9BXX2 1392 aa10.65□□□□□ -0.7
RGPD1-201ENST00000398193 ZNF644Q9H582 1327 aaPredicted RBP10.65□□□□□ -0.7
RGPD1-201ENST00000398193 INO80Q9ULG1 1556 aaPredicted RBP10.65□□□□□ -0.7
RGPD1-201ENST00000398193 TONSLQ96HA7 1378 aa10.65□□□□□ -0.7
RGPD1-201ENST00000398193 DIEXFQ68CQ4 756 aaKnown RBP10.65□□□□□ -0.7
RGPD1-201ENST00000398193 MPHOSPH9Q99550 1183 aa10.65□□□□□ -0.7
RGPD1-201ENST00000398193 RRP7BPQ9NSQ0 103 aa10.65□□□□□ -0.7
RGPD1-201ENST00000398193 TSPY4P0CV99 314 aa10.64□□□□□ -0.71
RGPD1-201ENST00000398193 TSPY10P0CW01 314 aa10.64□□□□□ -0.71
RGPD1-201ENST00000398193 GLI2P10070 1586 aa10.64□□□□□ -0.71
RGPD1-201ENST00000398193 DEPDC5O75140 1603 aa10.63□□□□□ -0.71
RGPD1-201ENST00000398193 ARHGEF12Q9NZN5 1544 aa10.63□□□□□ -0.71
RGPD1-201ENST00000398193 PPP1R15AO75807 674 aaPredicted RBP10.63□□□□□ -0.71
RGPD1-201ENST00000398193 EFCAB2Q5VUJ9 269 aa10.63□□□□□ -0.71
RGPD1-201ENST00000398193 TEX14Q8IWB6 1497 aa10.63□□□□□ -0.71
RGPD1-201ENST00000398193 KIF15Q9NS87 1388 aa10.63□□□□□ -0.71
RGPD1-201ENST00000398193 ZFYVE16Q7Z3T8 1539 aa10.62□□□□□ -0.71
RGPD1-201ENST00000398193 BCORL1Q5H9F3 1711 aa10.62□□□□□ -0.71
RGPD1-201ENST00000398193 ASXL2Q76L83 1435 aa10.62□□□□□ -0.71
RGPD1-201ENST00000398193 CHIC2Q9UKJ5 165 aa10.62□□□□□ -0.71
RGPD1-201ENST00000398193 NEURL4Q96JN8 1562 aa10.61□□□□□ -0.71
RGPD1-201ENST00000398193 FAM135AQ9P2D6 1515 aa10.6□□□□□ -0.71
RGPD1-201ENST00000398193 ATP10AO60312 1499 aa10.6□□□□□ -0.71
RGPD1-201ENST00000398193 TRIM52Q96A61 297 aa10.6□□□□□ -0.71
RGPD1-201ENST00000398193 ZNF777Q9ULD5 760 aaPredicted RBP10.59□□□□□ -0.71
RGPD1-201ENST00000398193 FANCAO15360 1455 aa10.58□□□□□ -0.72
RGPD1-201ENST00000398193 NEO1Q92859 1461 aa10.58□□□□□ -0.72
RGPD1-201ENST00000398193 KDM5CP41229 1560 aa10.58□□□□□ -0.72
RGPD1-201ENST00000398193 MAP3K4Q9Y6R4 1608 aa10.58□□□□□ -0.72
RGPD1-201ENST00000398193 ATP7AQ04656 1500 aa10.58□□□□□ -0.72
RGPD1-201ENST00000398193 UHRF1BP1Q6BDS2 1440 aa10.58□□□□□ -0.72
RGPD1-201ENST00000398193 VWDEQ8N2E2 1590 aa10.57□□□□□ -0.72
RGPD1-201ENST00000398193 POLR1AO95602 1720 aaPredicted RBP10.57□□□□□ -0.72
RGPD1-201ENST00000398193 SIN3AQ96ST3 1273 aa10.57□□□□□ -0.72
RGPD1-201ENST00000398193 RNF17Q9BXT8 1623 aaKnown RBP10.56□□□□□ -0.72
RGPD1-201ENST00000398193 LAMC1P11047 1609 aa10.56□□□□□ -0.72
RGPD1-201ENST00000398193 HNRNPMP52272 730 aaKnown RBP eCLIP10.55□□□□□ -0.72
RGPD1-201ENST00000398193 SLC4A1APQ9BWU0 796 aaKnown RBP10.55□□□□□ -0.72
RGPD1-201ENST00000398193 ZNF518AQ6AHZ1 1483 aa10.55□□□□□ -0.72
RGPD1-201ENST00000398193 TET3O43151 1660 aa10.55□□□□□ -0.72
RGPD1-201ENST00000398193 PRDM15P57071 1507 aaPredicted RBP10.54□□□□□ -0.72
RGPD1-201ENST00000398193 LMTK2Q8IWU2 1503 aa10.54□□□□□ -0.72
RGPD1-201ENST00000398193 ADGRL1O94910 1474 aa10.54□□□□□ -0.72
RGPD1-201ENST00000398193 NPM1P06748 294 aaKnown RBP eCLIP10.54□□□□□ -0.72
RGPD1-201ENST00000398193 NEUROD1Q13562 356 aa10.54□□□□□ -0.72
RGPD1-201ENST00000398193 RIMBP3CA6NJZ7 1639 aa10.53□□□□□ -0.72
RGPD1-201ENST00000398193 RIMBP3BA6NNM3 1639 aa10.53□□□□□ -0.72
RGPD1-201ENST00000398193 RIMBP3Q9UFD9 1639 aa10.53□□□□□ -0.72
RGPD1-201ENST00000398193 NUP155O75694 1391 aa10.53□□□□□ -0.72
RGPD1-201ENST00000398193 TRAPPC8Q9Y2L5 1435 aa10.53□□□□□ -0.72
RGPD1-201ENST00000398193 MLH3Q9UHC1 1453 aa10.53□□□□□ -0.72
RGPD1-201ENST00000398193 HECW2Q9P2P5 1572 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms