RNA–Protein interactions for RNA: ENST00000398080.5

SCML1-204, Transcript of Scm polycomb group protein like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCML1, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML1-204ENST00000398080 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
SCML1-204ENST00000398080 PPP4R2Q9NY27 417 aa16.98■□□□□ 0.31
SCML1-204ENST00000398080 PDS5BQ9NTI5 1447 aa16.97■□□□□ 0.31
SCML1-204ENST00000398080 LAMC3Q9Y6N6 1575 aa16.97■□□□□ 0.31
SCML1-204ENST00000398080 EHBP1L1Q8N3D4 1523 aa16.97■□□□□ 0.31
SCML1-204ENST00000398080 PAK3O75914 559 aaPredicted RBP16.97■□□□□ 0.31
SCML1-204ENST00000398080 ERICH6Q7L0X2 663 aa16.97■□□□□ 0.31
SCML1-204ENST00000398080 NBR1Q14596 966 aa16.95■□□□□ 0.3
SCML1-204ENST00000398080 NCOA1Q15788 1441 aa16.95■□□□□ 0.3
SCML1-204ENST00000398080 EPRSP07814 1512 aaKnown RBP16.95■□□□□ 0.3
SCML1-204ENST00000398080 ABCA5Q8WWZ7 1642 aa16.95■□□□□ 0.3
SCML1-204ENST00000398080 ANKRD30BQ9BXX2 1392 aa16.93■□□□□ 0.3
SCML1-204ENST00000398080 ARHGEF11O15085 1522 aa16.93■□□□□ 0.3
SCML1-204ENST00000398080 FANCIQ9NVI1 1328 aa16.92■□□□□ 0.3
SCML1-204ENST00000398080 KDM2AQ9Y2K7 1162 aa16.9■□□□□ 0.3
SCML1-204ENST00000398080 ZBED9Q6R2W3 1325 aa16.89■□□□□ 0.29
SCML1-204ENST00000398080 HECW1Q76N89 1606 aa16.89■□□□□ 0.29
SCML1-204ENST00000398080 ABCC5O15440 1437 aa16.88■□□□□ 0.29
SCML1-204ENST00000398080 GCC2Q8IWJ2 1684 aa16.88■□□□□ 0.29
SCML1-204ENST00000398080 KIF21AQ7Z4S6 1674 aa16.87■□□□□ 0.29
SCML1-204ENST00000398080 TCOF1Q13428 1488 aaKnown RBP16.87■□□□□ 0.29
SCML1-204ENST00000398080 TEX14Q8IWB6 1497 aa16.87■□□□□ 0.29
SCML1-204ENST00000398080 SKAP1Q86WV1 359 aa16.87■□□□□ 0.29
SCML1-204ENST00000398080 DAPK1P53355 1430 aa16.86■□□□□ 0.29
SCML1-204ENST00000398080 SPATA31E1Q6ZUB1 1445 aa16.85■□□□□ 0.29
SCML1-204ENST00000398080 RPRD2Q5VT52 1461 aaKnown RBP16.85■□□□□ 0.29
SCML1-204ENST00000398080 PKD2Q13563 968 aa16.85■□□□□ 0.29
SCML1-204ENST00000398080 PRG4Q92954 1404 aaPredicted RBP16.84■□□□□ 0.29
SCML1-204ENST00000398080 DHX29Q7Z478 1369 aaKnown RBP16.83■□□□□ 0.29
SCML1-204ENST00000398080 BCORL1Q5H9F3 1711 aa16.83■□□□□ 0.29
SCML1-204ENST00000398080 ZNF608Q9ULD9 1512 aaPredicted RBP16.82■□□□□ 0.28
SCML1-204ENST00000398080 FBLN2P98095 1184 aa16.82■□□□□ 0.28
SCML1-204ENST00000398080 USP47Q96K76 1375 aa16.8■□□□□ 0.28
SCML1-204ENST00000398080 IQGAP2Q13576 1575 aa16.8■□□□□ 0.28
SCML1-204ENST00000398080 WDR62O43379 1518 aa16.8■□□□□ 0.28
SCML1-204ENST00000398080 CCDC136Q96JN2 1154 aa16.8■□□□□ 0.28
SCML1-204ENST00000398080 CFDP1Q9UEE9 299 aaPredicted RBP16.8■□□□□ 0.28
SCML1-204ENST00000398080 TARBP1Q13395 1621 aaKnown RBP16.8■□□□□ 0.28
SCML1-204ENST00000398080 PZPP20742 1482 aa16.78■□□□□ 0.28
SCML1-204ENST00000398080 DEKP35659 375 aaKnown RBP16.78■□□□□ 0.28
SCML1-204ENST00000398080 NPM2Q86SE8 214 aaKnown RBP16.78■□□□□ 0.28
SCML1-204ENST00000398080 ST20-MTHFSA0A0A6YYL1 179 aa16.76■□□□□ 0.27
SCML1-204ENST00000398080 NUDCQ9Y266 331 aa16.76■□□□□ 0.27
SCML1-204ENST00000398080 NUP153P49790 1475 aaKnown RBP16.76■□□□□ 0.27
SCML1-204ENST00000398080 TMC1Q8TDI8 760 aa16.76■□□□□ 0.27
SCML1-204ENST00000398080 MIA2Q96PC5 1412 aa16.75■□□□□ 0.27
SCML1-204ENST00000398080 PNISRQ8TF01 805 aaKnown RBP16.75■□□□□ 0.27
SCML1-204ENST00000398080 CARD11Q9BXL7 1154 aa16.74■□□□□ 0.27
SCML1-204ENST00000398080 NOP58Q9Y2X3 529 aaKnown RBP16.74■□□□□ 0.27
SCML1-204ENST00000398080 PBRM1Q86U86 1689 aa16.73■□□□□ 0.27
SCML1-204ENST00000398080 PLB1Q6P1J6 1458 aa16.73■□□□□ 0.27
SCML1-204ENST00000398080 EXOC6Q8TAG9 804 aa16.73■□□□□ 0.27
SCML1-204ENST00000398080 PLIN1O60240 522 aa16.72■□□□□ 0.27
SCML1-204ENST00000398080 RGL3Q3MIN7 710 aa16.72■□□□□ 0.27
SCML1-204ENST00000398080 DCAF11Q8TEB1 546 aa16.72■□□□□ 0.27
SCML1-204ENST00000398080 CDCA7LQ96GN5 454 aa16.72■□□□□ 0.27
SCML1-204ENST00000398080 DISP1Q96F81 1524 aa16.71■□□□□ 0.27
SCML1-204ENST00000398080 DNMT1P26358 1616 aaKnown RBP16.7■□□□□ 0.26
SCML1-204ENST00000398080 SMG6Q86US8 1419 aaKnown RBP16.7■□□□□ 0.26
SCML1-204ENST00000398080 KIF14Q15058 1648 aa16.69■□□□□ 0.26
SCML1-204ENST00000398080 HNRNPMP52272 730 aaKnown RBP eCLIP16.69■□□□□ 0.263e-7■■■□□ 18.5
SCML1-204ENST00000398080 ADAMTS12P58397 1594 aa16.68■□□□□ 0.26
SCML1-204ENST00000398080 ERICH6BQ5W0A0 696 aa16.68■□□□□ 0.26
SCML1-204ENST00000398080 CAMSAP2Q08AD1 1489 aa16.68■□□□□ 0.26
SCML1-204ENST00000398080 NUP155O75694 1391 aa16.67■□□□□ 0.26
SCML1-204ENST00000398080 NBPF1Q3BBV0 1214 aa16.67■□□□□ 0.26
SCML1-204ENST00000398080 ROCK1Q13464 1354 aa16.67■□□□□ 0.26
SCML1-204ENST00000398080 CC2D1BQ5T0F9 858 aaKnown RBP16.66■□□□□ 0.26
SCML1-204ENST00000398080 LAS1LQ9Y4W2 734 aaKnown RBP16.64■□□□□ 0.25
SCML1-204ENST00000398080 KIAA1107Q9UPP5 1409 aa16.64■□□□□ 0.25
SCML1-204ENST00000398080 GPATCH8Q9UKJ3 1502 aaKnown RBP16.63■□□□□ 0.25
SCML1-204ENST00000398080 MBD5Q9P267 1494 aa16.63■□□□□ 0.25
SCML1-204ENST00000398080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.63■□□□□ 0.251e-7■■■■□ 21.3
SCML1-204ENST00000398080 KIAA0556O60303 1618 aa16.62■□□□□ 0.25
SCML1-204ENST00000398080 RNF123Q5XPI4 1314 aa16.62■□□□□ 0.25
SCML1-204ENST00000398080 KDM5CP41229 1560 aa16.61■□□□□ 0.25
SCML1-204ENST00000398080 ANKRD50Q9ULJ7 1429 aa16.6■□□□□ 0.25
SCML1-204ENST00000398080 CHMP7Q8WUX9 453 aaPredicted RBP16.6■□□□□ 0.25
SCML1-204ENST00000398080 RAPGEF6Q8TEU7 1601 aa16.59■□□□□ 0.25
SCML1-204ENST00000398080 IPO9Q96P70 1041 aaKnown RBP16.59■□□□□ 0.25
SCML1-204ENST00000398080 POLR1AO95602 1720 aaPredicted RBP16.59■□□□□ 0.25
SCML1-204ENST00000398080 RRP1P56182 461 aaKnown RBP16.58■□□□□ 0.25
SCML1-204ENST00000398080 ANP32AP39687 249 aaKnown RBP16.57■□□□□ 0.24
SCML1-204ENST00000398080 KIAA0586Q9BVV6 1533 aa16.57■□□□□ 0.24
SCML1-204ENST00000398080 TROQ12816 1431 aaPredicted RBP16.57■□□□□ 0.24
SCML1-204ENST00000398080 C20orf194Q5TEA3 1177 aa16.56■□□□□ 0.24
SCML1-204ENST00000398080 RTN4Q9NQC3 1192 aaKnown RBP16.56■□□□□ 0.24
SCML1-204ENST00000398080 ZBTB47Q9UFB7 747 aaPredicted RBP16.56■□□□□ 0.24
SCML1-204ENST00000398080 RCAN3Q9UKA8 241 aa16.56■□□□□ 0.24
SCML1-204ENST00000398080 SLC4A3P48751 1232 aa16.55■□□□□ 0.24
SCML1-204ENST00000398080 ROCK2O75116 1388 aaKnown RBP16.55■□□□□ 0.24
SCML1-204ENST00000398080 ANKRD30AQ9BXX3 1397 aa16.54■□□□□ 0.24
SCML1-204ENST00000398080 MYBBP1AQ9BQG0 1328 aaKnown RBP16.53■□□□□ 0.24
SCML1-204ENST00000398080 JPH4Q96JJ6 628 aa16.53■□□□□ 0.24
SCML1-204ENST00000398080 KIF15Q9NS87 1388 aa16.53■□□□□ 0.24
SCML1-204ENST00000398080 GRIN2AQ12879 1464 aa16.52■□□□□ 0.23
SCML1-204ENST00000398080 LRPPRCP42704 1394 aaKnown RBP16.51■□□□□ 0.23
SCML1-204ENST00000398080 IL27Q8NEV9 243 aa16.51■□□□□ 0.23
SCML1-204ENST00000398080 PDE4AP27815 886 aa16.51■□□□□ 0.23
SCML1-204ENST00000398080 C9orf84Q5VXU9 1444 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms