RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 GGT6Q6P531 493 aa16.09■□□□□ 0.17
SOCS6-201ENST00000397942 ROCK2O75116 1388 aaKnown RBP16.07■□□□□ 0.16
SOCS6-201ENST00000397942 MORC1Q86VD1 984 aa16.07■□□□□ 0.16
SOCS6-201ENST00000397942 PHLDB1Q86UU1 1377 aa16.07■□□□□ 0.16
SOCS6-201ENST00000397942 SAFB2Q14151 953 aaKnown RBP eCLIP16.07■□□□□ 0.16
SOCS6-201ENST00000397942 PLEKHG5O94827 1062 aa16.05■□□□□ 0.16
SOCS6-201ENST00000397942 TCERG1O14776 1098 aaKnown RBP16.04■□□□□ 0.16
SOCS6-201ENST00000397942 RSPH4AQ5TD94 716 aa16.04■□□□□ 0.16
SOCS6-201ENST00000397942 DEKP35659 375 aaKnown RBP16.03■□□□□ 0.16
SOCS6-201ENST00000397942 C14orf37Q86TY3 774 aa16.02■□□□□ 0.16
SOCS6-201ENST00000397942 SRPK2P78362 688 aaKnown RBP16.02■□□□□ 0.15
SOCS6-201ENST00000397942 RTN4Q9NQC3 1192 aaKnown RBP16.02■□□□□ 0.15
SOCS6-201ENST00000397942 PDE3BQ13370 1112 aa16.02■□□□□ 0.15
SOCS6-201ENST00000397942 KIF21BO75037 1637 aa16.01■□□□□ 0.15
SOCS6-201ENST00000397942 MS4A1P11836 297 aa16.01■□□□□ 0.15
SOCS6-201ENST00000397942 KIF3BO15066 747 aa16.01■□□□□ 0.15
SOCS6-201ENST00000397942 GOLGA6L22H0YM25 854 aa16■□□□□ 0.15
SOCS6-201ENST00000397942 KANK1Q14678 1352 aa16■□□□□ 0.15
SOCS6-201ENST00000397942 CCDC18Q5T9S5 1454 aa16■□□□□ 0.15
SOCS6-201ENST00000397942 FANCD2Q9BXW9 1451 aa16■□□□□ 0.15
SOCS6-201ENST00000397942 U2AF1L5P0DN76 240 aaPredicted RBP15.99■□□□□ 0.15
SOCS6-201ENST00000397942 U2AF1Q01081 240 aaKnown RBP eCLIP15.99■□□□□ 0.15
SOCS6-201ENST00000397942 ARAP1Q96P48 1450 aa15.99■□□□□ 0.15
SOCS6-201ENST00000397942 ZNF644Q9H582 1327 aaPredicted RBP15.99■□□□□ 0.15
SOCS6-201ENST00000397942 GOLGA2Q08379 1002 aa15.99■□□□□ 0.15
SOCS6-201ENST00000397942 ZBED9Q6R2W3 1325 aa15.98■□□□□ 0.15
SOCS6-201ENST00000397942 TRIM44Q96DX7 344 aaPredicted RBP15.98■□□□□ 0.15
SOCS6-201ENST00000397942 STK26Q9P289 416 aa15.97■□□□□ 0.15
SOCS6-201ENST00000397942 FGD6Q6ZV73 1430 aa15.96■□□□□ 0.15
SOCS6-201ENST00000397942 FGD5Q6ZNL6 1462 aa15.95■□□□□ 0.14
SOCS6-201ENST00000397942 ARID4BQ4LE39 1312 aaPredicted RBP15.95■□□□□ 0.14
SOCS6-201ENST00000397942 IPO9Q96P70 1041 aaKnown RBP15.95■□□□□ 0.14
SOCS6-201ENST00000397942 PANK3Q9H999 370 aa15.95■□□□□ 0.14
SOCS6-201ENST00000397942 ZBTB7CA1YPR0 619 aa15.94■□□□□ 0.14
SOCS6-201ENST00000397942 NCLP19338 710 aaKnown RBP15.94■□□□□ 0.14
SOCS6-201ENST00000397942 USP47Q96K76 1375 aa15.94■□□□□ 0.14
SOCS6-201ENST00000397942 NCAPD3P42695 1498 aa15.93■□□□□ 0.14
SOCS6-201ENST00000397942 CHMP4BQ9H444 224 aaKnown RBP15.93■□□□□ 0.14
SOCS6-201ENST00000397942 MYBBP1AQ9BQG0 1328 aaKnown RBP15.93■□□□□ 0.14
SOCS6-201ENST00000397942 CLUAP1Q96AJ1 413 aa15.93■□□□□ 0.14
SOCS6-201ENST00000397942 SPAG9O60271 1321 aaKnown RBP15.93■□□□□ 0.14
SOCS6-201ENST00000397942 RAD54L2Q9Y4B4 1467 aa15.92■□□□□ 0.14
SOCS6-201ENST00000397942 UACAQ9BZF9 1416 aa15.92■□□□□ 0.14
SOCS6-201ENST00000397942 WASHC2AQ641Q2 1341 aa15.91■□□□□ 0.14
SOCS6-201ENST00000397942 LRRC9Q6ZRR7 1453 aa15.91■□□□□ 0.14
SOCS6-201ENST00000397942 KIF7Q2M1P5 1343 aa15.91■□□□□ 0.14
SOCS6-201ENST00000397942 PNNQ9H307 717 aaKnown RBP15.91■□□□□ 0.14
SOCS6-201ENST00000397942 MLECQ14165 292 aa15.91■□□□□ 0.14
SOCS6-201ENST00000397942 CCDC146Q8IYE0 955 aa15.9■□□□□ 0.14
SOCS6-201ENST00000397942 KIF15Q9NS87 1388 aa15.9■□□□□ 0.14
SOCS6-201ENST00000397942 SOX12O15370 315 aa15.9■□□□□ 0.14
SOCS6-201ENST00000397942 PRXQ9BXM0 1461 aa15.9■□□□□ 0.14
SOCS6-201ENST00000397942 PLIN1O60240 522 aa15.9■□□□□ 0.14
SOCS6-201ENST00000397942 EXOC6Q8TAG9 804 aa15.89■□□□□ 0.13
SOCS6-201ENST00000397942 MYOM3Q5VTT5 1437 aa15.89■□□□□ 0.13
SOCS6-201ENST00000397942 RRBP1Q9P2E9 1410 aaKnown RBP15.89■□□□□ 0.13
SOCS6-201ENST00000397942 SLKQ9H2G2 1235 aaPredicted RBP15.89■□□□□ 0.13
SOCS6-201ENST00000397942 GLIPR1L2Q4G1C9 344 aa15.88■□□□□ 0.13
SOCS6-201ENST00000397942 CCDC7Q96M83 1385 aa15.88■□□□□ 0.13
SOCS6-201ENST00000397942 CCDC144AA2RUR9 1427 aa15.87■□□□□ 0.13
SOCS6-201ENST00000397942 SPRYD3Q8NCJ5 442 aa15.86■□□□□ 0.13
SOCS6-201ENST00000397942 IPO8O15397 1037 aaKnown RBP15.86■□□□□ 0.13
SOCS6-201ENST00000397942 TRAK1Q9UPV9 953 aa15.86■□□□□ 0.13
SOCS6-201ENST00000397942 RWDD1Q9H446 243 aaPredicted RBP15.86■□□□□ 0.13
SOCS6-201ENST00000397942 GAPVD1Q14C86 1478 aa15.86■□□□□ 0.13
SOCS6-201ENST00000397942 HSP90AB1P08238 724 aaKnown RBP15.85■□□□□ 0.13
SOCS6-201ENST00000397942 PDE4AP27815 886 aa15.85■□□□□ 0.13
SOCS6-201ENST00000397942 CASC1Q6TDU7 716 aa15.85■□□□□ 0.13
SOCS6-201ENST00000397942 LMOD2Q6P5Q4 547 aa15.84■□□□□ 0.13
SOCS6-201ENST00000397942 RRP1P56182 461 aaKnown RBP15.84■□□□□ 0.13
SOCS6-201ENST00000397942 SYNJ1O43426 1573 aa15.83■□□□□ 0.13
SOCS6-201ENST00000397942 APAF1O14727 1248 aa15.83■□□□□ 0.12
SOCS6-201ENST00000397942 HDGFL2Q7Z4V5 671 aaPredicted RBP15.83■□□□□ 0.12
SOCS6-201ENST00000397942 PTPRGP23470 1445 aa15.83■□□□□ 0.12
SOCS6-201ENST00000397942 HSCBQ8IWL3 235 aa15.83■□□□□ 0.12
SOCS6-201ENST00000397942 HAP1P54257 671 aaPredicted RBP15.82■□□□□ 0.12
SOCS6-201ENST00000397942 CENPJQ9HC77 1338 aaPredicted RBP15.82■□□□□ 0.12
SOCS6-201ENST00000397942 FANCIQ9NVI1 1328 aa15.81■□□□□ 0.12
SOCS6-201ENST00000397942 RRP7AQ9Y3A4 280 aaKnown RBP15.81■□□□□ 0.12
SOCS6-201ENST00000397942 NUTM2DQ5VT03 806 aaPredicted RBP15.81■□□□□ 0.12
SOCS6-201ENST00000397942 SMC4Q9NTJ3 1288 aa15.8■□□□□ 0.12
SOCS6-201ENST00000397942 ITPRIPQ8IWB1 547 aa15.8■□□□□ 0.12
SOCS6-201ENST00000397942 CASKIN1Q8WXD9 1431 aa15.8■□□□□ 0.12
SOCS6-201ENST00000397942 CFTRP13569 1480 aa15.8■□□□□ 0.12
SOCS6-201ENST00000397942 WASHC2CQ9Y4E1 1318 aa15.79■□□□□ 0.12
SOCS6-201ENST00000397942 NBPF8Q3BBV2 869 aa15.79■□□□□ 0.12
SOCS6-201ENST00000397942 TPRNQ4KMQ1 711 aa15.79■□□□□ 0.12
SOCS6-201ENST00000397942 BCL2L13Q9BXK5 485 aa15.79■□□□□ 0.12
SOCS6-201ENST00000397942 APBB1O00213 710 aa15.79■□□□□ 0.12
SOCS6-201ENST00000397942 HDGFP51858 240 aaKnown RBP15.78■□□□□ 0.12
SOCS6-201ENST00000397942 TERF2IPQ9NYB0 399 aa15.78■□□□□ 0.12
SOCS6-201ENST00000397942 ERICH3Q5RHP9 1530 aa15.77■□□□□ 0.12
SOCS6-201ENST00000397942 PTMAP06454 111 aaKnown RBP15.77■□□□□ 0.12
SOCS6-201ENST00000397942 CRBNQ96SW2 442 aa15.77■□□□□ 0.12
SOCS6-201ENST00000397942 EIF3AQ14152 1382 aaKnown RBP15.77■□□□□ 0.11
SOCS6-201ENST00000397942 NCOA2Q15596 1464 aa15.77■□□□□ 0.11
SOCS6-201ENST00000397942 PMFBP1Q8TBY8 1022 aa15.77■□□□□ 0.11
SOCS6-201ENST00000397942 A0A0G2JS52 829 aa15.76■□□□□ 0.11
SOCS6-201ENST00000397942 SLC4A3P48751 1232 aa15.76■□□□□ 0.11
SOCS6-201ENST00000397942 ANKRD50Q9ULJ7 1429 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms