RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 FOXD1Q16676 465 aa25.96■■□□□ 1.75
CHRFAM7A-202ENST00000397827 PLB1Q6P1J6 1458 aa25.96■■□□□ 1.75
CHRFAM7A-202ENST00000397827 PRG4Q92954 1404 aaPredicted RBP25.95■■□□□ 1.75
CHRFAM7A-202ENST00000397827 ABCC5O15440 1437 aa25.94■■□□□ 1.74
CHRFAM7A-202ENST00000397827 JPH4Q96JJ6 628 aa25.91■■□□□ 1.74
CHRFAM7A-202ENST00000397827 DNMT1P26358 1616 aaKnown RBP25.89■■□□□ 1.74
CHRFAM7A-202ENST00000397827 TROQ12816 1431 aaPredicted RBP25.88■■□□□ 1.73
CHRFAM7A-202ENST00000397827 ROCK1Q13464 1354 aa25.87■■□□□ 1.73
CHRFAM7A-202ENST00000397827 ANP32CO43423 234 aa25.87■■□□□ 1.73
CHRFAM7A-202ENST00000397827 ANP32EQ9BTT0 268 aa25.86■■□□□ 1.73
CHRFAM7A-202ENST00000397827 CFDP1Q9UEE9 299 aaPredicted RBP25.86■■□□□ 1.73
CHRFAM7A-202ENST00000397827 NUP160Q12769 1436 aa25.85■■□□□ 1.73
CHRFAM7A-202ENST00000397827 CARMIL2Q6F5E8 1435 aa25.85■■□□□ 1.73
CHRFAM7A-202ENST00000397827 ZNF777Q9ULD5 760 aaPredicted RBP25.84■■□□□ 1.73
CHRFAM7A-202ENST00000397827 SUPT16HQ9Y5B9 1047 aaKnown RBP25.83■■□□□ 1.73
CHRFAM7A-202ENST00000397827 L3MBTL2Q969R5 705 aa25.82■■□□□ 1.72
CHRFAM7A-202ENST00000397827 KIF14Q15058 1648 aa25.81■■□□□ 1.72
CHRFAM7A-202ENST00000397827 CAMSAP2Q08AD1 1489 aa25.8■■□□□ 1.72
CHRFAM7A-202ENST00000397827 GPATCH8Q9UKJ3 1502 aaKnown RBP25.79■■□□□ 1.72
CHRFAM7A-202ENST00000397827 HSPA5P11021 654 aaKnown RBP25.79■■□□□ 1.72
CHRFAM7A-202ENST00000397827 SLC4A1APQ9BWU0 796 aaKnown RBP25.78■■□□□ 1.72
CHRFAM7A-202ENST00000397827 CCER2I3L3R5 266 aa25.77■■□□□ 1.72
CHRFAM7A-202ENST00000397827 ANKRD30BQ9BXX2 1392 aa25.76■■□□□ 1.71
CHRFAM7A-202ENST00000397827 ITSN2Q9NZM3 1697 aa25.73■■□□□ 1.71
CHRFAM7A-202ENST00000397827 WASHC2AQ641Q2 1341 aa25.72■■□□□ 1.71
CHRFAM7A-202ENST00000397827 EIF4G2P78344 907 aaKnown RBP eCLIP25.71■■□□□ 1.71
CHRFAM7A-202ENST00000397827 NCOA1Q15788 1441 aa25.71■■□□□ 1.71
CHRFAM7A-202ENST00000397827 ADCY10Q96PN6 1610 aa25.71■■□□□ 1.71
CHRFAM7A-202ENST00000397827 PLEKHD1A6NEE1 506 aa25.7■■□□□ 1.71
CHRFAM7A-202ENST00000397827 RPRD2Q5VT52 1461 aaKnown RBP25.7■■□□□ 1.7
CHRFAM7A-202ENST00000397827 PRKCSHP14314 528 aaPredicted RBP25.67■■□□□ 1.7
CHRFAM7A-202ENST00000397827 NBPF8Q3BBV2 869 aa25.67■■□□□ 1.7
CHRFAM7A-202ENST00000397827 ABCA8O94911 1581 aa25.67■■□□□ 1.7
CHRFAM7A-202ENST00000397827 ATP10BO94823 1461 aa25.66■■□□□ 1.7
CHRFAM7A-202ENST00000397827 PZPP20742 1482 aa25.65■■□□□ 1.7
CHRFAM7A-202ENST00000397827 TEX14Q8IWB6 1497 aa25.64■■□□□ 1.69
CHRFAM7A-202ENST00000397827 ADGBQ8N7X0 1667 aa25.63■■□□□ 1.69
CHRFAM7A-202ENST00000397827 C11orf95C9JLR9 678 aaPredicted RBP25.61■■□□□ 1.69
CHRFAM7A-202ENST00000397827 CROCC2H7BZ55 1655 aa25.6■■□□□ 1.69
CHRFAM7A-202ENST00000397827 CDC42BPAQ5VT25 1732 aa25.6■■□□□ 1.69
CHRFAM7A-202ENST00000397827 ADGRL2O95490 1459 aa25.6■■□□□ 1.69
CHRFAM7A-202ENST00000397827 ANKRD30AQ9BXX3 1397 aa25.6■■□□□ 1.69
CHRFAM7A-202ENST00000397827 ABCC10Q5T3U5 1492 aa25.59■■□□□ 1.69
CHRFAM7A-202ENST00000397827 PKD2Q13563 968 aa25.56■■□□□ 1.68
CHRFAM7A-202ENST00000397827 PTPRGP23470 1445 aa25.55■■□□□ 1.68
CHRFAM7A-202ENST00000397827 ANKRD50Q9ULJ7 1429 aa25.55■■□□□ 1.68
CHRFAM7A-202ENST00000397827 KIAA1107Q9UPP5 1409 aa25.52■■□□□ 1.68
CHRFAM7A-202ENST00000397827 HNRNPMP52272 730 aaKnown RBP eCLIP25.51■■□□□ 1.67
CHRFAM7A-202ENST00000397827 BCANQ96GW7 911 aa25.51■■□□□ 1.67
CHRFAM7A-202ENST00000397827 C9orf84Q5VXU9 1444 aa25.51■■□□□ 1.67
CHRFAM7A-202ENST00000397827 CCDC7Q96M83 1385 aa25.51■■□□□ 1.67
CHRFAM7A-202ENST00000397827 FKBP8Q14318 412 aa25.51■■□□□ 1.67
CHRFAM7A-202ENST00000397827 CNTLNQ9NXG0 1405 aa25.5■■□□□ 1.67
CHRFAM7A-202ENST00000397827 TSHZ2Q9NRE2 1034 aa25.5■■□□□ 1.67
CHRFAM7A-202ENST00000397827 TSPY4P0CV99 314 aa25.49■■□□□ 1.67
CHRFAM7A-202ENST00000397827 TSPY10P0CW01 314 aa25.49■■□□□ 1.67
CHRFAM7A-202ENST00000397827 ZNF326Q5BKZ1 582 aaKnown RBP25.48■■□□□ 1.67
CHRFAM7A-202ENST00000397827 NUP155O75694 1391 aa25.47■■□□□ 1.67
CHRFAM7A-202ENST00000397827 SPATA31E1Q6ZUB1 1445 aa25.46■■□□□ 1.67
CHRFAM7A-202ENST00000397827 CHD1O14646 1710 aa25.45■■□□□ 1.66
CHRFAM7A-202ENST00000397827 SHANK2Q9UPX8 1470 aa25.45■■□□□ 1.66
CHRFAM7A-202ENST00000397827 HNRNPUQ00839 825 aaKnown RBP eCLIP25.44■■□□□ 1.66
CHRFAM7A-202ENST00000397827 CCDC184Q52MB2 194 aa25.43■■□□□ 1.66
CHRFAM7A-202ENST00000397827 KIF7Q2M1P5 1343 aa25.43■■□□□ 1.66
CHRFAM7A-202ENST00000397827 KIF15Q9NS87 1388 aa25.41■■□□□ 1.66
CHRFAM7A-202ENST00000397827 MBD5Q9P267 1494 aa25.4■■□□□ 1.66
CHRFAM7A-202ENST00000397827 PRKRIP1Q9H875 184 aaPredicted RBP25.39■■□□□ 1.65
CHRFAM7A-202ENST00000397827 NEFLP07196 543 aa25.37■■□□□ 1.65
CHRFAM7A-202ENST00000397827 CDC42BPBQ9Y5S2 1711 aa25.36■■□□□ 1.65
CHRFAM7A-202ENST00000397827 SAMD9LQ8IVG5 1584 aa25.36■■□□□ 1.65
CHRFAM7A-202ENST00000397827 ARHGEF5Q12774 1597 aa25.34■■□□□ 1.65
CHRFAM7A-202ENST00000397827 USP47Q96K76 1375 aa25.33■■□□□ 1.65
CHRFAM7A-202ENST00000397827 ERCC6L2Q5T890 1561 aa25.32■■□□□ 1.64
CHRFAM7A-202ENST00000397827 PREX2Q70Z35 1606 aa25.32■■□□□ 1.64
CHRFAM7A-202ENST00000397827 CCDC141Q6ZP82 1450 aa25.32■■□□□ 1.64
CHRFAM7A-202ENST00000397827 POLR3GLQ9BT43 218 aa25.32■■□□□ 1.64
CHRFAM7A-202ENST00000397827 POLR1AO95602 1720 aaPredicted RBP25.3■■□□□ 1.64
CHRFAM7A-202ENST00000397827 KDM2AQ9Y2K7 1162 aa25.29■■□□□ 1.64
CHRFAM7A-202ENST00000397827 KDM5DQ9BY66 1539 aa25.29■■□□□ 1.64
CHRFAM7A-202ENST00000397827 SHROOM2Q13796 1616 aa25.29■■□□□ 1.64
CHRFAM7A-202ENST00000397827 FAM9BQ8IZU0 186 aa25.28■■□□□ 1.64
CHRFAM7A-202ENST00000397827 MRS2Q9HD23 443 aa25.28■■□□□ 1.64
CHRFAM7A-202ENST00000397827 TTC37Q6PGP7 1564 aa25.28■■□□□ 1.64
CHRFAM7A-202ENST00000397827 CNGB1Q14028 1251 aaPredicted RBP25.27■■□□□ 1.64
CHRFAM7A-202ENST00000397827 BCORL1Q5H9F3 1711 aa25.26■■□□□ 1.63
CHRFAM7A-202ENST00000397827 SYCP2Q9BX26 1530 aa25.26■■□□□ 1.63
CHRFAM7A-202ENST00000397827 ARHGAP5Q13017 1502 aa25.26■■□□□ 1.63
CHRFAM7A-202ENST00000397827 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.25■■□□□ 1.63
CHRFAM7A-202ENST00000397827 RSPH4AQ5TD94 716 aa25.24■■□□□ 1.63
CHRFAM7A-202ENST00000397827 DCAF11Q8TEB1 546 aa25.23■■□□□ 1.63
CHRFAM7A-202ENST00000397827 KDM5CP41229 1560 aa25.23■■□□□ 1.63
CHRFAM7A-202ENST00000397827 UHRF1BP1Q6BDS2 1440 aa25.22■■□□□ 1.63
CHRFAM7A-202ENST00000397827 CARD11Q9BXL7 1154 aa25.22■■□□□ 1.63
CHRFAM7A-202ENST00000397827 ABCC2Q92887 1545 aa25.21■■□□□ 1.63
CHRFAM7A-202ENST00000397827 FAM135AQ9P2D6 1515 aa25.21■■□□□ 1.63
CHRFAM7A-202ENST00000397827 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.2■■□□□ 1.62
CHRFAM7A-202ENST00000397827 RALGAPBQ86X10 1494 aa25.2■■□□□ 1.62
CHRFAM7A-202ENST00000397827 ARHGEF12Q9NZN5 1544 aa25.18■■□□□ 1.62
CHRFAM7A-202ENST00000397827 DHX29Q7Z478 1369 aaKnown RBP25.17■■□□□ 1.62
CHRFAM7A-202ENST00000397827 IRX6P78412 446 aaPredicted RBP25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms