RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 IQGAP2Q13576 1575 aa14.35□□□□□ -0.11
CPSF1P1-201ENST00000397477 C11orf95C9JLR9 678 aaPredicted RBP14.34□□□□□ -0.11
CPSF1P1-201ENST00000397477 CCDC184Q52MB2 194 aa14.34□□□□□ -0.11
CPSF1P1-201ENST00000397477 DCAF11Q8TEB1 546 aa14.34□□□□□ -0.11
CPSF1P1-201ENST00000397477 NUP155O75694 1391 aa14.33□□□□□ -0.12
CPSF1P1-201ENST00000397477 SUPT6HQ7KZ85 1726 aaKnown RBP14.33□□□□□ -0.12
CPSF1P1-201ENST00000397477 CARD11Q9BXL7 1154 aa14.33□□□□□ -0.12
CPSF1P1-201ENST00000397477 PTPN23Q9H3S7 1636 aa14.33□□□□□ -0.12
CPSF1P1-201ENST00000397477 MAGI3Q5TCQ9 1506 aa14.33□□□□□ -0.12
CPSF1P1-201ENST00000397477 PLB1Q6P1J6 1458 aa14.32□□□□□ -0.12
CPSF1P1-201ENST00000397477 THOC2Q8NI27 1593 aaKnown RBP14.32□□□□□ -0.12
CPSF1P1-201ENST00000397477 CARMIL2Q6F5E8 1435 aa14.32□□□□□ -0.12
CPSF1P1-201ENST00000397477 ABCA5Q8WWZ7 1642 aa14.31□□□□□ -0.12
CPSF1P1-201ENST00000397477 IFT140Q96RY7 1462 aa14.31□□□□□ -0.12
CPSF1P1-201ENST00000397477 TSHZ2Q9NRE2 1034 aa14.29□□□□□ -0.12
CPSF1P1-201ENST00000397477 HECW1Q76N89 1606 aa14.28□□□□□ -0.12
CPSF1P1-201ENST00000397477 KIAA0586Q9BVV6 1533 aa14.27□□□□□ -0.12
CPSF1P1-201ENST00000397477 TMC1Q8TDI8 760 aa14.27□□□□□ -0.13
CPSF1P1-201ENST00000397477 DAPK1P53355 1430 aa14.27□□□□□ -0.13
CPSF1P1-201ENST00000397477 UGGT2Q9NYU1 1516 aa14.27□□□□□ -0.13
CPSF1P1-201ENST00000397477 SENP3Q9H4L4 574 aaPredicted RBP14.26□□□□□ -0.13
CPSF1P1-201ENST00000397477 ANKRD30AQ9BXX3 1397 aa14.26□□□□□ -0.13
CPSF1P1-201ENST00000397477 ABCC5O15440 1437 aa14.26□□□□□ -0.13
CPSF1P1-201ENST00000397477 GRIN2AQ12879 1464 aa14.25□□□□□ -0.13
CPSF1P1-201ENST00000397477 PRKRIP1Q9H875 184 aaPredicted RBP14.25□□□□□ -0.13
CPSF1P1-201ENST00000397477 TARBP1Q13395 1621 aaKnown RBP14.24□□□□□ -0.13
CPSF1P1-201ENST00000397477 SAMD9Q5K651 1589 aa14.24□□□□□ -0.13
CPSF1P1-201ENST00000397477 MIA2Q96PC5 1412 aa14.24□□□□□ -0.13
CPSF1P1-201ENST00000397477 KIF7Q2M1P5 1343 aa14.24□□□□□ -0.13
CPSF1P1-201ENST00000397477 PTPRGP23470 1445 aa14.23□□□□□ -0.13
CPSF1P1-201ENST00000397477 ERICH6Q7L0X2 663 aa14.22□□□□□ -0.13
CPSF1P1-201ENST00000397477 NUP153P49790 1475 aaKnown RBP14.22□□□□□ -0.13
CPSF1P1-201ENST00000397477 ADAMTS12P58397 1594 aa14.21□□□□□ -0.13
CPSF1P1-201ENST00000397477 ST20-MTHFSA0A0A6YYL1 179 aa14.21□□□□□ -0.13
CPSF1P1-201ENST00000397477 TROQ12816 1431 aaPredicted RBP14.21□□□□□ -0.14
CPSF1P1-201ENST00000397477 CCDC7Q96M83 1385 aa14.21□□□□□ -0.14
CPSF1P1-201ENST00000397477 B4GALNT3Q6L9W6 998 aa14.2□□□□□ -0.14
CPSF1P1-201ENST00000397477 ANKRD30BQ9BXX2 1392 aa14.19□□□□□ -0.14
CPSF1P1-201ENST00000397477 KDM6BO15054 1643 aa14.19□□□□□ -0.14
CPSF1P1-201ENST00000397477 ANKRD50Q9ULJ7 1429 aa14.18□□□□□ -0.14
CPSF1P1-201ENST00000397477 DISP1Q96F81 1524 aa14.18□□□□□ -0.14
CPSF1P1-201ENST00000397477 CHGAP10645 457 aaKnown RBP14.17□□□□□ -0.14
CPSF1P1-201ENST00000397477 WDR62O43379 1518 aa14.17□□□□□ -0.14
CPSF1P1-201ENST00000397477 USP47Q96K76 1375 aa14.17□□□□□ -0.14
CPSF1P1-201ENST00000397477 CC2D1BQ5T0F9 858 aaKnown RBP14.16□□□□□ -0.14
CPSF1P1-201ENST00000397477 PBRM1Q86U86 1689 aa14.16□□□□□ -0.14
CPSF1P1-201ENST00000397477 ARHGEF11O15085 1522 aa14.16□□□□□ -0.14
CPSF1P1-201ENST00000397477 KIF15Q9NS87 1388 aa14.15□□□□□ -0.14
CPSF1P1-201ENST00000397477 CAMSAP2Q08AD1 1489 aa14.15□□□□□ -0.14
CPSF1P1-201ENST00000397477 SYNJ2O15056 1496 aa14.14□□□□□ -0.15
CPSF1P1-201ENST00000397477 NCOA1Q15788 1441 aa14.13□□□□□ -0.15
CPSF1P1-201ENST00000397477 CNTLNQ9NXG0 1405 aa14.13□□□□□ -0.15
CPSF1P1-201ENST00000397477 LRRIQ1Q96JM4 1722 aa14.13□□□□□ -0.15
CPSF1P1-201ENST00000397477 RBM19Q9Y4C8 960 aaKnown RBP14.12□□□□□ -0.15
CPSF1P1-201ENST00000397477 ROCK2O75116 1388 aaKnown RBP14.12□□□□□ -0.15
CPSF1P1-201ENST00000397477 GPATCH8Q9UKJ3 1502 aaKnown RBP14.12□□□□□ -0.15
CPSF1P1-201ENST00000397477 TCOF1Q13428 1488 aaKnown RBP14.12□□□□□ -0.15
CPSF1P1-201ENST00000397477 KIAA0556O60303 1618 aa14.12□□□□□ -0.15
CPSF1P1-201ENST00000397477 AKNAQ7Z591 1439 aa14.11□□□□□ -0.15
CPSF1P1-201ENST00000397477 EIF4G3O43432 1585 aaKnown RBP14.11□□□□□ -0.15
CPSF1P1-201ENST00000397477 NBPF1Q3BBV0 1214 aa14.11□□□□□ -0.15
CPSF1P1-201ENST00000397477 ROCK1Q13464 1354 aa14.11□□□□□ -0.15
CPSF1P1-201ENST00000397477 C9orf84Q5VXU9 1444 aa14.1□□□□□ -0.15
CPSF1P1-201ENST00000397477 RAPGEF6Q8TEU7 1601 aa14.09□□□□□ -0.15
CPSF1P1-201ENST00000397477 KIAA1107Q9UPP5 1409 aa14.08□□□□□ -0.15
CPSF1P1-201ENST00000397477 MAGI1Q96QZ7 1491 aaPredicted RBP14.08□□□□□ -0.16
CPSF1P1-201ENST00000397477 RPRD2Q5VT52 1461 aaKnown RBP14.07□□□□□ -0.16
CPSF1P1-201ENST00000397477 CCDC136Q96JN2 1154 aa14.07□□□□□ -0.16
CPSF1P1-201ENST00000397477 DENND4BO75064 1496 aaPredicted RBP14.07□□□□□ -0.16
CPSF1P1-201ENST00000397477 AFAP1Q8N556 730 aa14.07□□□□□ -0.16
CPSF1P1-201ENST00000397477 ATP10BO94823 1461 aa14.06□□□□□ -0.16
CPSF1P1-201ENST00000397477 EFCAB2Q5VUJ9 269 aa14.05□□□□□ -0.16
CPSF1P1-201ENST00000397477 PPP4R2Q9NY27 417 aa14.04□□□□□ -0.16
CPSF1P1-201ENST00000397477 CCDC144AA2RUR9 1427 aa14.03□□□□□ -0.16
CPSF1P1-201ENST00000397477 CEP170Q5SW79 1584 aa14.03□□□□□ -0.16
CPSF1P1-201ENST00000397477 KIF14Q15058 1648 aa14.03□□□□□ -0.16
CPSF1P1-201ENST00000397477 KIF3BO15066 747 aa14.01□□□□□ -0.17
CPSF1P1-201ENST00000397477 PZPP20742 1482 aa14□□□□□ -0.17
CPSF1P1-201ENST00000397477 NPM1P06748 294 aaKnown RBP eCLIP14□□□□□ -0.17
CPSF1P1-201ENST00000397477 SPAG9O60271 1321 aaKnown RBP14□□□□□ -0.17
CPSF1P1-201ENST00000397477 ZBED9Q6R2W3 1325 aa14□□□□□ -0.17
CPSF1P1-201ENST00000397477 NPM2Q86SE8 214 aaKnown RBP14□□□□□ -0.17
CPSF1P1-201ENST00000397477 ARHGAP5Q13017 1502 aa13.99□□□□□ -0.17
CPSF1P1-201ENST00000397477 PANK3Q9H999 370 aa13.99□□□□□ -0.17
CPSF1P1-201ENST00000397477 RSPH4AQ5TD94 716 aa13.98□□□□□ -0.17
CPSF1P1-201ENST00000397477 TMF1P82094 1093 aa13.97□□□□□ -0.17
CPSF1P1-201ENST00000397477 GGT6Q6P531 493 aa13.97□□□□□ -0.17
CPSF1P1-201ENST00000397477 TNNT2P45379 298 aaPredicted RBP13.97□□□□□ -0.17
CPSF1P1-201ENST00000397477 DNMT1P26358 1616 aaKnown RBP13.96□□□□□ -0.17
CPSF1P1-201ENST00000397477 NUTM2DQ5VT03 806 aaPredicted RBP13.96□□□□□ -0.17
CPSF1P1-201ENST00000397477 KNSTRNQ9Y448 316 aa13.96□□□□□ -0.17
CPSF1P1-201ENST00000397477 NUDCQ9Y266 331 aa13.95□□□□□ -0.18
CPSF1P1-201ENST00000397477 KDM5BQ9UGL1 1544 aa13.95□□□□□ -0.18
CPSF1P1-201ENST00000397477 TEX14Q8IWB6 1497 aa13.95□□□□□ -0.18
CPSF1P1-201ENST00000397477 ANP32EQ9BTT0 268 aa13.95□□□□□ -0.18
CPSF1P1-201ENST00000397477 NUP160Q12769 1436 aa13.95□□□□□ -0.18
CPSF1P1-201ENST00000397477 BCL11AQ9H165 835 aa13.94□□□□□ -0.18
CPSF1P1-201ENST00000397477 WDR43Q15061 677 aaKnown RBP eCLIP13.94□□□□□ -0.18
CPSF1P1-201ENST00000397477 KTN1Q86UP2 1357 aaKnown RBP13.93□□□□□ -0.18
CPSF1P1-201ENST00000397477 GCC2Q8IWJ2 1684 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms