RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 FHOD3Q2V2M9 1422 aa13.57□□□□□ -0.24
NUP98-206ENST00000397013 PHLDB1Q86UU1 1377 aa13.57□□□□□ -0.24
NUP98-206ENST00000397013 NUP153P49790 1475 aaKnown RBP13.56□□□□□ -0.24
NUP98-206ENST00000397013 ABCA9Q8IUA7 1624 aa13.56□□□□□ -0.24
NUP98-206ENST00000397013 PLEKHD1A6NEE1 506 aa13.55□□□□□ -0.24
NUP98-206ENST00000397013 ADAMTSL3P82987 1691 aa13.55□□□□□ -0.24
NUP98-206ENST00000397013 NEO1Q92859 1461 aa13.55□□□□□ -0.24
NUP98-206ENST00000397013 MLECQ14165 292 aa13.54□□□□□ -0.24
NUP98-206ENST00000397013 FRMPD1Q5SYB0 1578 aa13.54□□□□□ -0.24
NUP98-206ENST00000397013 SAMD9Q5K651 1589 aa13.53□□□□□ -0.24
NUP98-206ENST00000397013 AKNAQ7Z591 1439 aa13.52□□□□□ -0.25
NUP98-206ENST00000397013 RAPGEF6Q8TEU7 1601 aa13.52□□□□□ -0.25
NUP98-206ENST00000397013 MADDQ8WXG6 1647 aa13.5□□□□□ -0.25
NUP98-206ENST00000397013 LMTK3Q96Q04 1460 aa13.5□□□□□ -0.25
NUP98-206ENST00000397013 DENND4BO75064 1496 aaPredicted RBP13.49□□□□□ -0.25
NUP98-206ENST00000397013 YEATS2Q9ULM3 1422 aa13.49□□□□□ -0.25
NUP98-206ENST00000397013 BCORL1Q5H9F3 1711 aa13.48□□□□□ -0.25
NUP98-206ENST00000397013 SPINK5Q9NQ38 1064 aaPredicted RBP13.47□□□□□ -0.25
NUP98-206ENST00000397013 ATP1B4Q9UN42 357 aaPredicted RBP13.47□□□□□ -0.25
NUP98-206ENST00000397013 PCF11O94913 1555 aaKnown RBP13.46□□□□□ -0.25
NUP98-206ENST00000397013 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.46□□□□□ -0.25
NUP98-206ENST00000397013 CEBPAP49715 358 aaPredicted RBP13.46□□□□□ -0.25
NUP98-206ENST00000397013 FANCAO15360 1455 aa13.46□□□□□ -0.25
NUP98-206ENST00000397013 SIGLEC1Q9BZZ2 1709 aa13.44□□□□□ -0.26
NUP98-206ENST00000397013 CAPN15O75808 1086 aa13.43□□□□□ -0.26
NUP98-206ENST00000397013 SCAPERQ9BY12 1400 aa13.43□□□□□ -0.26
NUP98-206ENST00000397013 CDK13Q14004 1512 aaKnown RBP13.43□□□□□ -0.26
NUP98-206ENST00000397013 RIMS1Q86UR5 1692 aaKnown RBP13.42□□□□□ -0.26
NUP98-206ENST00000397013 ARHGEF40Q8TER5 1519 aa13.42□□□□□ -0.26
NUP98-206ENST00000397013 TTC37Q6PGP7 1564 aa13.41□□□□□ -0.26
NUP98-206ENST00000397013 CERKQ8TCT0 537 aa13.41□□□□□ -0.26
NUP98-206ENST00000397013 AFAP1Q8N556 730 aa13.4□□□□□ -0.26
NUP98-206ENST00000397013 PLCH2O75038 1416 aa13.39□□□□□ -0.27
NUP98-206ENST00000397013 RICTORQ6R327 1708 aa13.39□□□□□ -0.27
NUP98-206ENST00000397013 UBTFP17480 764 aaKnown RBP13.39□□□□□ -0.27
NUP98-206ENST00000397013 FKBP8Q14318 412 aa13.39□□□□□ -0.27
NUP98-206ENST00000397013 ZFYVE16Q7Z3T8 1539 aa13.39□□□□□ -0.27
NUP98-206ENST00000397013 HECW1Q76N89 1606 aa13.38□□□□□ -0.27
NUP98-206ENST00000397013 POGZQ7Z3K3 1410 aa13.38□□□□□ -0.27
NUP98-206ENST00000397013 EFCAB2Q5VUJ9 269 aa13.37□□□□□ -0.27
NUP98-206ENST00000397013 EEA1Q15075 1411 aa13.37□□□□□ -0.27
NUP98-206ENST00000397013 ZMYM4Q5VZL5 1548 aa13.35□□□□□ -0.27
NUP98-206ENST00000397013 POLA2Q14181 598 aa13.34□□□□□ -0.27
NUP98-206ENST00000397013 ATP10AO60312 1499 aa13.34□□□□□ -0.27
NUP98-206ENST00000397013 MAGI2Q86UL8 1455 aa13.34□□□□□ -0.27
NUP98-206ENST00000397013 MYT1LQ9UL68 1186 aa13.33□□□□□ -0.28
NUP98-206ENST00000397013 ILDR2Q71H61 639 aa13.32□□□□□ -0.28
NUP98-206ENST00000397013 EFCAB5A4FU69 1503 aa13.32□□□□□ -0.28
NUP98-206ENST00000397013 ARHGAP35Q9NRY4 1499 aa13.3□□□□□ -0.28
NUP98-206ENST00000397013 ARHGEF12Q9NZN5 1544 aa13.3□□□□□ -0.28
NUP98-206ENST00000397013 C9orf84Q5VXU9 1444 aa13.3□□□□□ -0.28
NUP98-206ENST00000397013 CDK11AQ9UQ88 783 aaPredicted RBP13.29□□□□□ -0.28
NUP98-206ENST00000397013 CFAP74Q9C0B2 1584 aa13.28□□□□□ -0.28
NUP98-206ENST00000397013 KIF14Q15058 1648 aa13.28□□□□□ -0.28
NUP98-206ENST00000397013 ZBTB12Q9Y330 459 aaPredicted RBP13.27□□□□□ -0.29
NUP98-206ENST00000397013 TROQ12816 1431 aaPredicted RBP13.26□□□□□ -0.29
NUP98-206ENST00000397013 FMN1Q68DA7 1419 aa13.26□□□□□ -0.29
NUP98-206ENST00000397013 TRAPPC8Q9Y2L5 1435 aa13.26□□□□□ -0.29
NUP98-206ENST00000397013 FER1L4A9Z1Z3 1794 aa13.25□□□□□ -0.29
NUP98-206ENST00000397013 ARHGAP5Q13017 1502 aa13.24□□□□□ -0.29
NUP98-206ENST00000397013 DISP3Q9P2K9 1392 aa13.23□□□□□ -0.29
NUP98-206ENST00000397013 ZNF518AQ6AHZ1 1483 aa13.23□□□□□ -0.29
NUP98-206ENST00000397013 MKRN4PQ13434 485 aaPredicted RBP13.22□□□□□ -0.29
NUP98-206ENST00000397013 ZNF777Q9ULD5 760 aaPredicted RBP13.22□□□□□ -0.29
NUP98-206ENST00000397013 UHRF1BP1Q6BDS2 1440 aa13.22□□□□□ -0.29
NUP98-206ENST00000397013 STRCQ7RTU9 1775 aa13.2□□□□□ -0.3
NUP98-206ENST00000397013 HNRNPMP52272 730 aaKnown RBP eCLIP13.2□□□□□ -0.3
NUP98-206ENST00000397013 KDM5CP41229 1560 aa13.2□□□□□ -0.3
NUP98-206ENST00000397013 DIP2CQ9Y2E4 1556 aa13.2□□□□□ -0.3
NUP98-206ENST00000397013 ESF1Q9H501 851 aaKnown RBP13.19□□□□□ -0.3
NUP98-206ENST00000397013 NCKAP5LQ9HCH0 1330 aa13.18□□□□□ -0.3
NUP98-206ENST00000397013 MLH3Q9UHC1 1453 aa13.18□□□□□ -0.3
NUP98-206ENST00000397013 DSG3P32926 999 aa13.18□□□□□ -0.3
NUP98-206ENST00000397013 CLIP1P30622 1438 aa13.18□□□□□ -0.3
NUP98-206ENST00000397013 MYO5CQ9NQX4 1742 aa13.18□□□□□ -0.3
NUP98-206ENST00000397013 ABCA6Q8N139 1617 aa13.17□□□□□ -0.3
NUP98-206ENST00000397013 PREX1Q8TCU6 1659 aa13.16□□□□□ -0.3
NUP98-206ENST00000397013 LRRIQ1Q96JM4 1722 aa13.16□□□□□ -0.3
NUP98-206ENST00000397013 PTPRTO14522 1441 aa13.15□□□□□ -0.3
NUP98-206ENST00000397013 SOCS7O14512 581 aa13.15□□□□□ -0.3
NUP98-206ENST00000397013 CACNB1Q02641 598 aaPredicted RBP13.15□□□□□ -0.3
NUP98-206ENST00000397013 ABCB7O75027 752 aa13.14□□□□□ -0.31
NUP98-206ENST00000397013 ZMYM3Q14202 1370 aa13.14□□□□□ -0.31
NUP98-206ENST00000397013 CASKIN1Q8WXD9 1431 aa13.13□□□□□ -0.31
NUP98-206ENST00000397013 CDC42BPBQ9Y5S2 1711 aa13.13□□□□□ -0.31
NUP98-206ENST00000397013 LTBP4Q8N2S1 1624 aa13.13□□□□□ -0.31
NUP98-206ENST00000397013 ABCC1P33527 1531 aa13.13□□□□□ -0.31
NUP98-206ENST00000397013 SPAG9O60271 1321 aaKnown RBP13.13□□□□□ -0.31
NUP98-206ENST00000397013 ZNF335Q9H4Z2 1342 aaPredicted RBP13.13□□□□□ -0.31
NUP98-206ENST00000397013 SPDYE4A6NLX3 237 aa13.12□□□□□ -0.31
NUP98-206ENST00000397013 GGT6Q6P531 493 aa13.12□□□□□ -0.31
NUP98-206ENST00000397013 AGLP35573 1532 aa13.12□□□□□ -0.31
NUP98-206ENST00000397013 NCOA1Q15788 1441 aa13.12□□□□□ -0.31
NUP98-206ENST00000397013 ZNF644Q9H582 1327 aaPredicted RBP13.12□□□□□ -0.31
NUP98-206ENST00000397013 C3P01024 1663 aa13.12□□□□□ -0.31
NUP98-206ENST00000397013 REREQ9P2R6 1566 aa13.11□□□□□ -0.31
NUP98-206ENST00000397013 GPATCH8Q9UKJ3 1502 aaKnown RBP13.1□□□□□ -0.31
NUP98-206ENST00000397013 KIDINS220Q9ULH0 1771 aa13.09□□□□□ -0.31
NUP98-206ENST00000397013 SAMD9LQ8IVG5 1584 aa13.08□□□□□ -0.32
NUP98-206ENST00000397013 UBAP1LF5GYI3 381 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms