RNA–Protein interactions for RNA: ENST00000396819.7

LTBP4-205, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP4, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-205ENST00000396819 DNMBPQ6XZF7 1577 aa22.54■■□□□ 1.2
LTBP4-205ENST00000396819 SNAPC4Q5SXM2 1469 aa22.53■■□□□ 1.2
LTBP4-205ENST00000396819 TNNT2P45379 298 aaPredicted RBP22.53■■□□□ 1.2
LTBP4-205ENST00000396819 TOP2BQ02880 1626 aa22.53■■□□□ 1.2
LTBP4-205ENST00000396819 NPM2Q86SE8 214 aaKnown RBP22.52■■□□□ 1.2
LTBP4-205ENST00000396819 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.49■■□□□ 1.19
LTBP4-205ENST00000396819 EID1Q9Y6B2 187 aa22.49■■□□□ 1.19
LTBP4-205ENST00000396819 FKBP8Q14318 412 aa22.48■■□□□ 1.19
LTBP4-205ENST00000396819 ZNF644Q9H582 1327 aaPredicted RBP22.47■■□□□ 1.19
LTBP4-205ENST00000396819 NUTM2DQ5VT03 806 aaPredicted RBP22.47■■□□□ 1.19
LTBP4-205ENST00000396819 CC2D1BQ5T0F9 858 aaKnown RBP22.47■■□□□ 1.19
LTBP4-205ENST00000396819 NUDCQ9Y266 331 aa22.46■■□□□ 1.19
LTBP4-205ENST00000396819 SENP3-EIF4A1A0A087X0R7 540 aa22.45■■□□□ 1.18
LTBP4-205ENST00000396819 L3MBTL2Q969R5 705 aa22.44■■□□□ 1.18
LTBP4-205ENST00000396819 HSPA5P11021 654 aaKnown RBP22.43■■□□□ 1.18
LTBP4-205ENST00000396819 UNC13AQ9UPW8 1703 aa22.43■■□□□ 1.18
LTBP4-205ENST00000396819 PRXQ9BXM0 1461 aa22.43■■□□□ 1.18
LTBP4-205ENST00000396819 ERICH3Q5RHP9 1530 aa22.43■■□□□ 1.18
LTBP4-205ENST00000396819 SOX12O15370 315 aa22.42■■□□□ 1.18
LTBP4-205ENST00000396819 ROCK2O75116 1388 aaKnown RBP22.41■■□□□ 1.18
LTBP4-205ENST00000396819 PRDM2Q13029 1718 aa22.41■■□□□ 1.18
LTBP4-205ENST00000396819 MYOM3Q5VTT5 1437 aa22.41■■□□□ 1.18
LTBP4-205ENST00000396819 KIF21BO75037 1637 aa22.4■■□□□ 1.18
LTBP4-205ENST00000396819 NEUROD2Q15784 382 aa22.4■■□□□ 1.18
LTBP4-205ENST00000396819 CASKIN1Q8WXD9 1431 aa22.4■■□□□ 1.18
LTBP4-205ENST00000396819 SYNJ2O15056 1496 aa22.4■■□□□ 1.18
LTBP4-205ENST00000396819 PEG3Q9GZU2 1588 aa22.39■■□□□ 1.17
LTBP4-205ENST00000396819 MAPK8IP3Q9UPT6 1336 aa22.37■■□□□ 1.17
LTBP4-205ENST00000396819 ABCA10Q8WWZ4 1543 aa22.37■■□□□ 1.17
LTBP4-205ENST00000396819 U2SURPO15042 1029 aaKnown RBP22.37■■□□□ 1.17
LTBP4-205ENST00000396819 AFAP1Q8N556 730 aa22.36■■□□□ 1.17
LTBP4-205ENST00000396819 ARAP1Q96P48 1450 aa22.34■■□□□ 1.17
LTBP4-205ENST00000396819 HDGFL2Q7Z4V5 671 aaPredicted RBP22.34■■□□□ 1.17
LTBP4-205ENST00000396819 FGD6Q6ZV73 1430 aa22.33■■□□□ 1.17
LTBP4-205ENST00000396819 CCDC144AA2RUR9 1427 aa22.33■■□□□ 1.16
LTBP4-205ENST00000396819 MORC1Q86VD1 984 aa22.33■■□□□ 1.16
LTBP4-205ENST00000396819 PHLDB1Q86UU1 1377 aa22.31■■□□□ 1.16
LTBP4-205ENST00000396819 LRRC9Q6ZRR7 1453 aa22.31■■□□□ 1.16
LTBP4-205ENST00000396819 CCDC136Q96JN2 1154 aa22.3■■□□□ 1.16
LTBP4-205ENST00000396819 KIF15Q9NS87 1388 aa22.3■■□□□ 1.16
LTBP4-205ENST00000396819 KIAA0586Q9BVV6 1533 aa22.3■■□□□ 1.16
LTBP4-205ENST00000396819 PAK3O75914 559 aaPredicted RBP22.3■■□□□ 1.16
LTBP4-205ENST00000396819 URB2Q14146 1524 aaKnown RBP22.28■■□□□ 1.16
LTBP4-205ENST00000396819 VGFO15240 615 aaPredicted RBP22.27■■□□□ 1.16
LTBP4-205ENST00000396819 LAS1LQ9Y4W2 734 aaKnown RBP22.27■■□□□ 1.16
LTBP4-205ENST00000396819 TRAK1Q9UPV9 953 aa22.27■■□□□ 1.16
LTBP4-205ENST00000396819 NCOA2Q15596 1464 aa22.27■■□□□ 1.16
LTBP4-205ENST00000396819 RTL5Q5HYW3 569 aaPredicted RBP22.26■■□□□ 1.15
LTBP4-205ENST00000396819 ARXQ96QS3 562 aa22.26■■□□□ 1.15
LTBP4-205ENST00000396819 EIF3AQ14152 1382 aaKnown RBP22.25■■□□□ 1.15
LTBP4-205ENST00000396819 FYCO1Q9BQS8 1478 aa22.24■■□□□ 1.15
LTBP4-205ENST00000396819 EFCAB5A4FU69 1503 aa22.23■■□□□ 1.15
LTBP4-205ENST00000396819 IRX6P78412 446 aaPredicted RBP22.22■■□□□ 1.15
LTBP4-205ENST00000396819 ARHGAP5Q13017 1502 aa22.21■■□□□ 1.15
LTBP4-205ENST00000396819 NUTM2FA1L443 756 aa22.21■■□□□ 1.15
LTBP4-205ENST00000396819 MYH16Q9H6N6 1097 aa22.21■■□□□ 1.15
LTBP4-205ENST00000396819 PNNQ9H307 717 aaKnown RBP22.21■■□□□ 1.15
LTBP4-205ENST00000396819 ZNF608Q9ULD9 1512 aaPredicted RBP22.2■■□□□ 1.14
LTBP4-205ENST00000396819 DHX57Q6P158 1386 aaKnown RBP22.19■■□□□ 1.14
LTBP4-205ENST00000396819 NGDNQ8NEJ9 315 aaKnown RBP22.18■■□□□ 1.14
LTBP4-205ENST00000396819 ANKRD50Q9ULJ7 1429 aa22.18■■□□□ 1.14
LTBP4-205ENST00000396819 MAGI1Q96QZ7 1491 aaPredicted RBP22.18■■□□□ 1.14
LTBP4-205ENST00000396819 UACAQ9BZF9 1416 aa22.18■■□□□ 1.14
LTBP4-205ENST00000396819 TERF2IPQ9NYB0 399 aa22.17■■□□□ 1.14
LTBP4-205ENST00000396819 TROQ12816 1431 aaPredicted RBP22.17■■□□□ 1.14
LTBP4-205ENST00000396819 GRIN2AQ12879 1464 aa22.14■■□□□ 1.14
LTBP4-205ENST00000396819 KTN1Q86UP2 1357 aaKnown RBP22.14■■□□□ 1.13
LTBP4-205ENST00000396819 UPF2Q9HAU5 1272 aaKnown RBP22.13■■□□□ 1.13
LTBP4-205ENST00000396819 ST20-MTHFSA0A0A6YYL1 179 aa22.13■■□□□ 1.13
LTBP4-205ENST00000396819 RAPGEF3O95398 923 aa22.12■■□□□ 1.13
LTBP4-205ENST00000396819 ANP32AP39687 249 aaKnown RBP22.12■■□□□ 1.13
LTBP4-205ENST00000396819 CSB-PGBD3P0DP91 1061 aa22.1■■□□□ 1.13
LTBP4-205ENST00000396819 IQGAP2Q13576 1575 aa22.09■■□□□ 1.13
LTBP4-205ENST00000396819 SCAPERQ9BY12 1400 aa22.09■■□□□ 1.13
LTBP4-205ENST00000396819 FTSJ3Q8IY81 847 aaKnown RBP22.07■■□□□ 1.12
LTBP4-205ENST00000396819 U2AF1L5P0DN76 240 aaPredicted RBP22.06■■□□□ 1.12
LTBP4-205ENST00000396819 U2AF1Q01081 240 aaKnown RBP eCLIP22.06■■□□□ 1.12
LTBP4-205ENST00000396819 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.04■■□□□ 1.124e-7■□□□□ 9.2
LTBP4-205ENST00000396819 RALBP1Q15311 655 aa22.03■■□□□ 1.12
LTBP4-205ENST00000396819 HSP90AA1P07900 732 aaKnown RBP22.03■■□□□ 1.12
LTBP4-205ENST00000396819 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.03■■□□□ 1.12
LTBP4-205ENST00000396819 RTF1Q92541 710 aaKnown RBP22.03■■□□□ 1.12
LTBP4-205ENST00000396819 FRAT1Q92837 279 aaPredicted RBP22.03■■□□□ 1.12
LTBP4-205ENST00000396819 MINK1Q8N4C8 1332 aaPredicted RBP22.02■■□□□ 1.12
LTBP4-205ENST00000396819 SUPT16HQ9Y5B9 1047 aaKnown RBP22.01■■□□□ 1.11
LTBP4-205ENST00000396819 CCER2I3L3R5 266 aa22.01■■□□□ 1.11
LTBP4-205ENST00000396819 AEBP2Q6ZN18 517 aaPredicted RBP22.01■■□□□ 1.11
LTBP4-205ENST00000396819 PLEKHH2Q8IVE3 1493 aa22.01■■□□□ 1.11
LTBP4-205ENST00000396819 PLB1Q6P1J6 1458 aa22.01■■□□□ 1.11
LTBP4-205ENST00000396819 MIA2Q96PC5 1412 aa22■■□□□ 1.11
LTBP4-205ENST00000396819 HECW1Q76N89 1606 aa22■■□□□ 1.11
LTBP4-205ENST00000396819 CUL7Q14999 1698 aa22■■□□□ 1.11
LTBP4-205ENST00000396819 EHBP1L1Q8N3D4 1523 aa22■■□□□ 1.11
LTBP4-205ENST00000396819 EPRSP07814 1512 aaKnown RBP21.99■■□□□ 1.11
LTBP4-205ENST00000396819 EVC2Q86UK5 1308 aa21.99■■□□□ 1.11
LTBP4-205ENST00000396819 C9orf84Q5VXU9 1444 aa21.98■■□□□ 1.11
LTBP4-205ENST00000396819 CDK13Q14004 1512 aaKnown RBP21.98■■□□□ 1.11
LTBP4-205ENST00000396819 STAC3Q96MF2 364 aa21.97■■□□□ 1.11
LTBP4-205ENST00000396819 NPHP1O15259 732 aa21.96■■□□□ 1.11
LTBP4-205ENST00000396819 CCDC9Q9Y3X0 531 aaKnown RBP21.95■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms