RNA–Protein interactions for RNA: ENST00000396401.7

TCEA1-201, Transcript of transcription elongation factor A1, humanhuman

TSL 1 (best) BASIC

Gene TCEA1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-201ENST00000396401 FANCIQ9NVI1 1328 aa24.32■■□□□ 1.48
TCEA1-201ENST00000396401 NCOA1Q15788 1441 aa24.3■■□□□ 1.48
TCEA1-201ENST00000396401 AKNAQ7Z591 1439 aa24.29■■□□□ 1.48
TCEA1-201ENST00000396401 ABCA5Q8WWZ7 1642 aa24.29■■□□□ 1.48
TCEA1-201ENST00000396401 LAMC3Q9Y6N6 1575 aa24.29■■□□□ 1.48
TCEA1-201ENST00000396401 ARHGEF11O15085 1522 aa24.27■■□□□ 1.48
TCEA1-201ENST00000396401 EPRSP07814 1512 aaKnown RBP24.27■■□□□ 1.48
TCEA1-201ENST00000396401 THOC2Q8NI27 1593 aaKnown RBP24.27■■□□□ 1.48
TCEA1-201ENST00000396401 HECW1Q76N89 1606 aa24.26■■□□□ 1.47
TCEA1-201ENST00000396401 ZBED9Q6R2W3 1325 aa24.25■■□□□ 1.47
TCEA1-201ENST00000396401 ZNF777Q9ULD5 760 aaPredicted RBP24.25■■□□□ 1.47
TCEA1-201ENST00000396401 GCC2Q8IWJ2 1684 aa24.24■■□□□ 1.47
TCEA1-201ENST00000396401 ANKRD30BQ9BXX2 1392 aa24.24■■□□□ 1.47
TCEA1-201ENST00000396401 TCOF1Q13428 1488 aaKnown RBP24.22■■□□□ 1.47
TCEA1-201ENST00000396401 NBR1Q14596 966 aa24.22■■□□□ 1.47
TCEA1-201ENST00000396401 PAK3O75914 559 aaPredicted RBP24.19■■□□□ 1.46
TCEA1-201ENST00000396401 SALL2Q9Y467 1007 aaPredicted RBP24.18■■□□□ 1.46
TCEA1-201ENST00000396401 TEX14Q8IWB6 1497 aa24.17■■□□□ 1.46
TCEA1-201ENST00000396401 PDS5BQ9NTI5 1447 aa24.16■■□□□ 1.46
TCEA1-201ENST00000396401 RPRD2Q5VT52 1461 aaKnown RBP24.16■■□□□ 1.46
TCEA1-201ENST00000396401 DAPK1P53355 1430 aa24.16■■□□□ 1.46
TCEA1-201ENST00000396401 ABCC5O15440 1437 aa24.15■■□□□ 1.46
TCEA1-201ENST00000396401 SPATA31E1Q6ZUB1 1445 aa24.13■■□□□ 1.45
TCEA1-201ENST00000396401 KIF21AQ7Z4S6 1674 aa24.11■■□□□ 1.45
TCEA1-201ENST00000396401 KDM2AQ9Y2K7 1162 aa24.11■■□□□ 1.45
TCEA1-201ENST00000396401 IQGAP2Q13576 1575 aa24.09■■□□□ 1.45
TCEA1-201ENST00000396401 CCDC136Q96JN2 1154 aa24.09■■□□□ 1.45
TCEA1-201ENST00000396401 MIA2Q96PC5 1412 aa24.08■■□□□ 1.45
TCEA1-201ENST00000396401 PKD2Q13563 968 aa24.08■■□□□ 1.45
TCEA1-201ENST00000396401 ERICH6BQ5W0A0 696 aa24.08■■□□□ 1.44
TCEA1-201ENST00000396401 DHX29Q7Z478 1369 aaKnown RBP24.08■■□□□ 1.44
TCEA1-201ENST00000396401 USP47Q96K76 1375 aa24.07■■□□□ 1.44
TCEA1-201ENST00000396401 WDR62O43379 1518 aa24.07■■□□□ 1.44
TCEA1-201ENST00000396401 TARBP1Q13395 1621 aaKnown RBP24.04■■□□□ 1.44
TCEA1-201ENST00000396401 DEKP35659 375 aaKnown RBP24.04■■□□□ 1.44
TCEA1-201ENST00000396401 CFDP1Q9UEE9 299 aaPredicted RBP24.04■■□□□ 1.44
TCEA1-201ENST00000396401 PRG4Q92954 1404 aaPredicted RBP24.04■■□□□ 1.44
TCEA1-201ENST00000396401 NUDCQ9Y266 331 aa24.04■■□□□ 1.44
TCEA1-201ENST00000396401 BCORL1Q5H9F3 1711 aa24.04■■□□□ 1.44
TCEA1-201ENST00000396401 TMC1Q8TDI8 760 aa24.02■■□□□ 1.44
TCEA1-201ENST00000396401 NOP58Q9Y2X3 529 aaKnown RBP24.02■■□□□ 1.44
TCEA1-201ENST00000396401 PZPP20742 1482 aa24■■□□□ 1.43
TCEA1-201ENST00000396401 ZNF608Q9ULD9 1512 aaPredicted RBP23.98■■□□□ 1.43
TCEA1-201ENST00000396401 PBRM1Q86U86 1689 aa23.98■■□□□ 1.43
TCEA1-201ENST00000396401 NPM2Q86SE8 214 aaKnown RBP23.97■■□□□ 1.43
TCEA1-201ENST00000396401 NUP153P49790 1475 aaKnown RBP23.97■■□□□ 1.43
TCEA1-201ENST00000396401 FBLN2P98095 1184 aa23.97■■□□□ 1.43
TCEA1-201ENST00000396401 CARD11Q9BXL7 1154 aa23.97■■□□□ 1.43
TCEA1-201ENST00000396401 SMG6Q86US8 1419 aaKnown RBP23.96■■□□□ 1.43
TCEA1-201ENST00000396401 ROCK1Q13464 1354 aa23.96■■□□□ 1.43
TCEA1-201ENST00000396401 PNISRQ8TF01 805 aaKnown RBP23.96■■□□□ 1.43
TCEA1-201ENST00000396401 DNMT1P26358 1616 aaKnown RBP23.95■■□□□ 1.43
TCEA1-201ENST00000396401 ST20-MTHFSA0A0A6YYL1 179 aa23.95■■□□□ 1.42
TCEA1-201ENST00000396401 SKAP1Q86WV1 359 aa23.93■■□□□ 1.42
TCEA1-201ENST00000396401 ADAMTS12P58397 1594 aa23.92■■□□□ 1.42
TCEA1-201ENST00000396401 DCAF11Q8TEB1 546 aa23.9■■□□□ 1.42
TCEA1-201ENST00000396401 CAMSAP2Q08AD1 1489 aa23.89■■□□□ 1.42
TCEA1-201ENST00000396401 DISP1Q96F81 1524 aa23.89■■□□□ 1.42
TCEA1-201ENST00000396401 EXOC6Q8TAG9 804 aa23.89■■□□□ 1.42
TCEA1-201ENST00000396401 PLB1Q6P1J6 1458 aa23.88■■□□□ 1.41
TCEA1-201ENST00000396401 KIAA1107Q9UPP5 1409 aa23.87■■□□□ 1.41
TCEA1-201ENST00000396401 NUP155O75694 1391 aa23.86■■□□□ 1.41
TCEA1-201ENST00000396401 ANP32AP39687 249 aaKnown RBP23.85■■□□□ 1.41
TCEA1-201ENST00000396401 POLR1AO95602 1720 aaPredicted RBP23.85■■□□□ 1.41
TCEA1-201ENST00000396401 RGL3Q3MIN7 710 aa23.84■■□□□ 1.41
TCEA1-201ENST00000396401 MBD5Q9P267 1494 aa23.83■■□□□ 1.41
TCEA1-201ENST00000396401 KIF14Q15058 1648 aa23.83■■□□□ 1.41
TCEA1-201ENST00000396401 RNF123Q5XPI4 1314 aa23.83■■□□□ 1.41
TCEA1-201ENST00000396401 PLIN1O60240 522 aa23.83■■□□□ 1.4
TCEA1-201ENST00000396401 CDCA7LQ96GN5 454 aa23.83■■□□□ 1.4
TCEA1-201ENST00000396401 KIAA0556O60303 1618 aa23.82■■□□□ 1.4
TCEA1-201ENST00000396401 IPO9Q96P70 1041 aaKnown RBP23.81■■□□□ 1.4
TCEA1-201ENST00000396401 KDM5CP41229 1560 aa23.8■■□□□ 1.4
TCEA1-201ENST00000396401 GPATCH8Q9UKJ3 1502 aaKnown RBP23.8■■□□□ 1.4
TCEA1-201ENST00000396401 ANKRD50Q9ULJ7 1429 aa23.8■■□□□ 1.4
TCEA1-201ENST00000396401 RAPGEF6Q8TEU7 1601 aa23.79■■□□□ 1.4
TCEA1-201ENST00000396401 HNRNPMP52272 730 aaKnown RBP eCLIP23.79■■□□□ 1.41e-6■■■■□ 21.8
TCEA1-201ENST00000396401 ZBTB47Q9UFB7 747 aaPredicted RBP23.79■■□□□ 1.4
TCEA1-201ENST00000396401 CC2D1BQ5T0F9 858 aaKnown RBP23.77■■□□□ 1.4
TCEA1-201ENST00000396401 LAS1LQ9Y4W2 734 aaKnown RBP23.77■■□□□ 1.4
TCEA1-201ENST00000396401 TROQ12816 1431 aaPredicted RBP23.77■■□□□ 1.4
TCEA1-201ENST00000396401 RRP1P56182 461 aaKnown RBP23.76■■□□□ 1.39
TCEA1-201ENST00000396401 NBPF1Q3BBV0 1214 aa23.75■■□□□ 1.39
TCEA1-201ENST00000396401 ANKRD30AQ9BXX3 1397 aa23.75■■□□□ 1.39
TCEA1-201ENST00000396401 KIAA0586Q9BVV6 1533 aa23.74■■□□□ 1.39
TCEA1-201ENST00000396401 CHMP7Q8WUX9 453 aaPredicted RBP23.74■■□□□ 1.39
TCEA1-201ENST00000396401 RCAN3Q9UKA8 241 aa23.73■■□□□ 1.39
TCEA1-201ENST00000396401 KIF15Q9NS87 1388 aa23.73■■□□□ 1.39
TCEA1-201ENST00000396401 MYBBP1AQ9BQG0 1328 aaKnown RBP23.72■■□□□ 1.39
TCEA1-201ENST00000396401 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.71■■□□□ 1.393e-7■■■■□ 23.7
TCEA1-201ENST00000396401 ROCK2O75116 1388 aaKnown RBP23.71■■□□□ 1.39
TCEA1-201ENST00000396401 LRPPRCP42704 1394 aaKnown RBP23.67■■□□□ 1.38
TCEA1-201ENST00000396401 RTL5Q5HYW3 569 aaPredicted RBP23.67■■□□□ 1.38
TCEA1-201ENST00000396401 GRIN2AQ12879 1464 aa23.66■■□□□ 1.38
TCEA1-201ENST00000396401 MRC2Q9UBG0 1479 aa23.66■■□□□ 1.38
TCEA1-201ENST00000396401 TSPY4P0CV99 314 aa23.66■■□□□ 1.38
TCEA1-201ENST00000396401 TSPY10P0CW01 314 aa23.66■■□□□ 1.38
TCEA1-201ENST00000396401 RALGAPBQ86X10 1494 aa23.66■■□□□ 1.38
TCEA1-201ENST00000396401 C9orf84Q5VXU9 1444 aa23.64■■□□□ 1.38
TCEA1-201ENST00000396401 PLEKHD1A6NEE1 506 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms