RNA–Protein interactions for RNA: ENST00000396185.7

CTNNB1-203, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-203ENST00000396185 NEFLP07196 543 aa16.78■□□□□ 0.28
CTNNB1-203ENST00000396185 CDK13Q14004 1512 aaKnown RBP16.78■□□□□ 0.28
CTNNB1-203ENST00000396185 TDRD9Q8NDG6 1382 aaKnown RBP16.78■□□□□ 0.28
CTNNB1-203ENST00000396185 CCDC7Q96M83 1385 aa16.78■□□□□ 0.28
CTNNB1-203ENST00000396185 ABCC5O15440 1437 aa16.77■□□□□ 0.27
CTNNB1-203ENST00000396185 KDM5CP41229 1560 aa16.76■□□□□ 0.27
CTNNB1-203ENST00000396185 HSPA5P11021 654 aaKnown RBP16.76■□□□□ 0.27
CTNNB1-203ENST00000396185 E9PCH4 1651 aa16.76■□□□□ 0.27
CTNNB1-203ENST00000396185 KDM5DQ9BY66 1539 aa16.76■□□□□ 0.27
CTNNB1-203ENST00000396185 PZPP20742 1482 aa16.76■□□□□ 0.27
CTNNB1-203ENST00000396185 TRIM52Q96A61 297 aa16.75■□□□□ 0.27
CTNNB1-203ENST00000396185 NUP153P49790 1475 aaKnown RBP16.74■□□□□ 0.27
CTNNB1-203ENST00000396185 BCORL1Q5H9F3 1711 aa16.73■□□□□ 0.27
CTNNB1-203ENST00000396185 ZBED9Q6R2W3 1325 aa16.73■□□□□ 0.27
CTNNB1-203ENST00000396185 HIRIP3Q9BW71 556 aaPredicted RBP16.72■□□□□ 0.27
CTNNB1-203ENST00000396185 KIAA0586Q9BVV6 1533 aa16.72■□□□□ 0.27
CTNNB1-203ENST00000396185 UHRF1BP1Q6BDS2 1440 aa16.71■□□□□ 0.27
CTNNB1-203ENST00000396185 MPHOSPH9Q99550 1183 aa16.71■□□□□ 0.27
CTNNB1-203ENST00000396185 EIF4G2P78344 907 aaKnown RBP eCLIP16.71■□□□□ 0.26
CTNNB1-203ENST00000396185 RNF123Q5XPI4 1314 aa16.7■□□□□ 0.26
CTNNB1-203ENST00000396185 MSH5O43196 834 aa16.7■□□□□ 0.26
CTNNB1-203ENST00000396185 ARHGEF12Q9NZN5 1544 aa16.7■□□□□ 0.26
CTNNB1-203ENST00000396185 PRKRIP1Q9H875 184 aaPredicted RBP16.69■□□□□ 0.26
CTNNB1-203ENST00000396185 DHX29Q7Z478 1369 aaKnown RBP16.69■□□□□ 0.26
CTNNB1-203ENST00000396185 BCANQ96GW7 911 aa16.69■□□□□ 0.26
CTNNB1-203ENST00000396185 ARID4BQ4LE39 1312 aaPredicted RBP16.69■□□□□ 0.26
CTNNB1-203ENST00000396185 MRC2Q9UBG0 1479 aa16.68■□□□□ 0.26
CTNNB1-203ENST00000396185 SHANK2Q9UPX8 1470 aa16.68■□□□□ 0.26
CTNNB1-203ENST00000396185 SMG6Q86US8 1419 aaKnown RBP16.67■□□□□ 0.26
CTNNB1-203ENST00000396185 CDC42BPAQ5VT25 1732 aa16.67■□□□□ 0.26
CTNNB1-203ENST00000396185 C11orf95C9JLR9 678 aaPredicted RBP16.66■□□□□ 0.26
CTNNB1-203ENST00000396185 IFT140Q96RY7 1462 aa16.66■□□□□ 0.26
CTNNB1-203ENST00000396185 L3MBTL2Q969R5 705 aa16.65■□□□□ 0.26
CTNNB1-203ENST00000396185 CAMSAP2Q08AD1 1489 aa16.64■□□□□ 0.26
CTNNB1-203ENST00000396185 PPP4R2Q9NY27 417 aa16.64■□□□□ 0.25
CTNNB1-203ENST00000396185 ATP1B4Q9UN42 357 aaPredicted RBP16.63■□□□□ 0.25
CTNNB1-203ENST00000396185 CEP170Q5SW79 1584 aa16.63■□□□□ 0.25
CTNNB1-203ENST00000396185 RALGAPBQ86X10 1494 aa16.63■□□□□ 0.25
CTNNB1-203ENST00000396185 HNRNPUQ00839 825 aaKnown RBP eCLIP16.62■□□□□ 0.25
CTNNB1-203ENST00000396185 LAMC1P11047 1609 aa16.62■□□□□ 0.25
CTNNB1-203ENST00000396185 NBPF8Q3BBV2 869 aa16.61■□□□□ 0.25
CTNNB1-203ENST00000396185 TROQ12816 1431 aaPredicted RBP16.61■□□□□ 0.25
CTNNB1-203ENST00000396185 KIAA1107Q9UPP5 1409 aa16.61■□□□□ 0.25
CTNNB1-203ENST00000396185 KIF7Q2M1P5 1343 aa16.61■□□□□ 0.25
CTNNB1-203ENST00000396185 PTPRGP23470 1445 aa16.6■□□□□ 0.25
CTNNB1-203ENST00000396185 CCDC184Q52MB2 194 aa16.6■□□□□ 0.25
CTNNB1-203ENST00000396185 ZMYM4Q5VZL5 1548 aa16.59■□□□□ 0.25
CTNNB1-203ENST00000396185 GPATCH8Q9UKJ3 1502 aaKnown RBP16.59■□□□□ 0.25
CTNNB1-203ENST00000396185 GRIN2AQ12879 1464 aa16.59■□□□□ 0.25
CTNNB1-203ENST00000396185 EIF4G3O43432 1585 aaKnown RBP16.59■□□□□ 0.25
CTNNB1-203ENST00000396185 RRP7BPQ9NSQ0 103 aa16.59■□□□□ 0.25
CTNNB1-203ENST00000396185 ARHGEF5Q12774 1597 aa16.58■□□□□ 0.24
CTNNB1-203ENST00000396185 KTN1Q86UP2 1357 aaKnown RBP16.56■□□□□ 0.24
CTNNB1-203ENST00000396185 ABCC10Q5T3U5 1492 aa16.55■□□□□ 0.24
CTNNB1-203ENST00000396185 ABCA8O94911 1581 aa16.55■□□□□ 0.24
CTNNB1-203ENST00000396185 CDK11AQ9UQ88 783 aaPredicted RBP16.55■□□□□ 0.24
CTNNB1-203ENST00000396185 LRPPRCP42704 1394 aaKnown RBP16.54■□□□□ 0.24
CTNNB1-203ENST00000396185 MAGI1Q96QZ7 1491 aaPredicted RBP16.54■□□□□ 0.24
CTNNB1-203ENST00000396185 ROCK2O75116 1388 aaKnown RBP16.53■□□□□ 0.24
CTNNB1-203ENST00000396185 INSRP06213 1382 aa16.53■□□□□ 0.24
CTNNB1-203ENST00000396185 MYT1LQ9UL68 1186 aa16.53■□□□□ 0.24
CTNNB1-203ENST00000396185 BCL11AQ9H165 835 aa16.52■□□□□ 0.23
CTNNB1-203ENST00000396185 TRPM1Q7Z4N2 1603 aa16.52■□□□□ 0.23
CTNNB1-203ENST00000396185 ZNF608Q9ULD9 1512 aaPredicted RBP16.5■□□□□ 0.23
CTNNB1-203ENST00000396185 MAST1Q9Y2H9 1570 aa16.49■□□□□ 0.23
CTNNB1-203ENST00000396185 NUP160Q12769 1436 aa16.48■□□□□ 0.23
CTNNB1-203ENST00000396185 UNC13BO14795 1591 aa16.48■□□□□ 0.23
CTNNB1-203ENST00000396185 CHIC2Q9UKJ5 165 aa16.47■□□□□ 0.23
CTNNB1-203ENST00000396185 USP47Q96K76 1375 aa16.46■□□□□ 0.23
CTNNB1-203ENST00000396185 PRG4Q92954 1404 aaPredicted RBP16.45■□□□□ 0.22
CTNNB1-203ENST00000396185 SYNJ2O15056 1496 aa16.45■□□□□ 0.22
CTNNB1-203ENST00000396185 PREX2Q70Z35 1606 aa16.44■□□□□ 0.22
CTNNB1-203ENST00000396185 MRS2Q9HD23 443 aa16.43■□□□□ 0.22
CTNNB1-203ENST00000396185 NUDCQ9Y266 331 aa16.42■□□□□ 0.22
CTNNB1-203ENST00000396185 ANKRD30AQ9BXX3 1397 aa16.42■□□□□ 0.22
CTNNB1-203ENST00000396185 RNF17Q9BXT8 1623 aaKnown RBP16.42■□□□□ 0.22
CTNNB1-203ENST00000396185 ANKRD50Q9ULJ7 1429 aa16.41■□□□□ 0.22
CTNNB1-203ENST00000396185 ZNF644Q9H582 1327 aaPredicted RBP16.41■□□□□ 0.22
CTNNB1-203ENST00000396185 BRD4O60885 1362 aaPredicted RBP16.41■□□□□ 0.22
CTNNB1-203ENST00000396185 FOXD1Q16676 465 aa16.41■□□□□ 0.22
CTNNB1-203ENST00000396185 PRDM15P57071 1507 aaPredicted RBP16.41■□□□□ 0.22
CTNNB1-203ENST00000396185 CDC42BPBQ9Y5S2 1711 aa16.4■□□□□ 0.22
CTNNB1-203ENST00000396185 PNISRQ8TF01 805 aaKnown RBP16.4■□□□□ 0.22
CTNNB1-203ENST00000396185 PLB1Q6P1J6 1458 aa16.4■□□□□ 0.22
CTNNB1-203ENST00000396185 PLXNC1O60486 1568 aa16.4■□□□□ 0.22
CTNNB1-203ENST00000396185 SLC4A1APQ9BWU0 796 aaKnown RBP16.39■□□□□ 0.21
CTNNB1-203ENST00000396185 GPRASP1Q5JY77 1395 aa16.39■□□□□ 0.21
CTNNB1-203ENST00000396185 IQGAP3Q86VI3 1631 aa16.39■□□□□ 0.21
CTNNB1-203ENST00000396185 MYO5CQ9NQX4 1742 aa16.39■□□□□ 0.21
CTNNB1-203ENST00000396185 MAGI2Q86UL8 1455 aa16.38■□□□□ 0.21
CTNNB1-203ENST00000396185 KIF15Q9NS87 1388 aa16.38■□□□□ 0.21
CTNNB1-203ENST00000396185 ATP10AO60312 1499 aa16.37■□□□□ 0.21
CTNNB1-203ENST00000396185 SAMD9LQ8IVG5 1584 aa16.37■□□□□ 0.21
CTNNB1-203ENST00000396185 C9orf84Q5VXU9 1444 aa16.37■□□□□ 0.21
CTNNB1-203ENST00000396185 EIF2AK4Q9P2K8 1649 aaKnown RBP16.36■□□□□ 0.21
CTNNB1-203ENST00000396185 PARD3Q8TEW0 1356 aa16.36■□□□□ 0.21
CTNNB1-203ENST00000396185 IRX6P78412 446 aaPredicted RBP16.35■□□□□ 0.21
CTNNB1-203ENST00000396185 FAM135AQ9P2D6 1515 aa16.35■□□□□ 0.21
CTNNB1-203ENST00000396185 ATP10BO94823 1461 aa16.33■□□□□ 0.2
CTNNB1-203ENST00000396185 FAM9BQ8IZU0 186 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms