RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 ZNF644Q9H582 1327 aaPredicted RBP17.66■□□□□ 0.42
GTF2A2-202ENST00000396060 DAPK1P53355 1430 aa17.66■□□□□ 0.42
GTF2A2-202ENST00000396060 NAIPQ13075 1403 aa17.65■□□□□ 0.42
GTF2A2-202ENST00000396060 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.65■□□□□ 0.423e-6■□□□□ 8.9
GTF2A2-202ENST00000396060 ACIN1Q9UKV3 1341 aaKnown RBP17.64■□□□□ 0.42
GTF2A2-202ENST00000396060 PREX2Q70Z35 1606 aa17.63■□□□□ 0.41
GTF2A2-202ENST00000396060 WDR7Q9Y4E6 1490 aa17.62■□□□□ 0.41
GTF2A2-202ENST00000396060 RSPH4AQ5TD94 716 aa17.62■□□□□ 0.41
GTF2A2-202ENST00000396060 CDC42BPBQ9Y5S2 1711 aa17.61■□□□□ 0.41
GTF2A2-202ENST00000396060 ARAP3Q8WWN8 1544 aa17.6■□□□□ 0.41
GTF2A2-202ENST00000396060 TTC37Q6PGP7 1564 aa17.6■□□□□ 0.41
GTF2A2-202ENST00000396060 PLCH2O75038 1416 aa17.6■□□□□ 0.41
GTF2A2-202ENST00000396060 ARHGEF5Q12774 1597 aa17.59■□□□□ 0.41
GTF2A2-202ENST00000396060 ADGRL2O95490 1459 aa17.58■□□□□ 0.41
GTF2A2-202ENST00000396060 GCC2Q8IWJ2 1684 aa17.58■□□□□ 0.4
GTF2A2-202ENST00000396060 KIAA1107Q9UPP5 1409 aa17.58■□□□□ 0.4
GTF2A2-202ENST00000396060 MBD5Q9P267 1494 aa17.58■□□□□ 0.4
GTF2A2-202ENST00000396060 SHANK2Q9UPX8 1470 aa17.58■□□□□ 0.4
GTF2A2-202ENST00000396060 NPM1P06748 294 aaKnown RBP eCLIP17.57■□□□□ 0.4
GTF2A2-202ENST00000396060 KCNH8Q96L42 1107 aa17.57■□□□□ 0.4
GTF2A2-202ENST00000396060 PLEKHH2Q8IVE3 1493 aa17.57■□□□□ 0.4
GTF2A2-202ENST00000396060 MYO5CQ9NQX4 1742 aa17.57■□□□□ 0.4
GTF2A2-202ENST00000396060 ASXL2Q76L83 1435 aa17.56■□□□□ 0.4
GTF2A2-202ENST00000396060 ZNF777Q9ULD5 760 aaPredicted RBP17.56■□□□□ 0.4
GTF2A2-202ENST00000396060 SAMD9LQ8IVG5 1584 aa17.55■□□□□ 0.4
GTF2A2-202ENST00000396060 CROCC2H7BZ55 1655 aa17.54■□□□□ 0.4
GTF2A2-202ENST00000396060 NCOA1Q15788 1441 aa17.54■□□□□ 0.4
GTF2A2-202ENST00000396060 CHIC2Q9UKJ5 165 aa17.54■□□□□ 0.4
GTF2A2-202ENST00000396060 ABCA9Q8IUA7 1624 aa17.54■□□□□ 0.4
GTF2A2-202ENST00000396060 EFCAB2Q5VUJ9 269 aa17.53■□□□□ 0.4
GTF2A2-202ENST00000396060 ARHGAP5Q13017 1502 aa17.53■□□□□ 0.4
GTF2A2-202ENST00000396060 RRP7BPQ9NSQ0 103 aa17.53■□□□□ 0.4
GTF2A2-202ENST00000396060 RIMBP3CA6NJZ7 1639 aa17.52■□□□□ 0.4
GTF2A2-202ENST00000396060 RIMBP3BA6NNM3 1639 aa17.52■□□□□ 0.4
GTF2A2-202ENST00000396060 RIMBP3Q9UFD9 1639 aa17.52■□□□□ 0.4
GTF2A2-202ENST00000396060 ADGBQ8N7X0 1667 aa17.51■□□□□ 0.39
GTF2A2-202ENST00000396060 ANKRD30AQ9BXX3 1397 aa17.51■□□□□ 0.39
GTF2A2-202ENST00000396060 CCDC141Q6ZP82 1450 aa17.5■□□□□ 0.39
GTF2A2-202ENST00000396060 MAPKBP1O60336 1514 aa17.5■□□□□ 0.39
GTF2A2-202ENST00000396060 TSPY4P0CV99 314 aa17.49■□□□□ 0.39
GTF2A2-202ENST00000396060 TSPY10P0CW01 314 aa17.49■□□□□ 0.39
GTF2A2-202ENST00000396060 HNRNPMP52272 730 aaKnown RBP eCLIP17.49■□□□□ 0.39
GTF2A2-202ENST00000396060 C9orf84Q5VXU9 1444 aa17.48■□□□□ 0.39
GTF2A2-202ENST00000396060 MAST1Q9Y2H9 1570 aa17.48■□□□□ 0.39
GTF2A2-202ENST00000396060 CYB5RLQ6IPT4 315 aa17.45■□□□□ 0.38
GTF2A2-202ENST00000396060 KDM6BO15054 1643 aa17.44■□□□□ 0.38
GTF2A2-202ENST00000396060 SYCP2Q9BX26 1530 aa17.44■□□□□ 0.38
GTF2A2-202ENST00000396060 ARHGEF12Q9NZN5 1544 aa17.44■□□□□ 0.38
GTF2A2-202ENST00000396060 ABCC1P33527 1531 aa17.43■□□□□ 0.38
GTF2A2-202ENST00000396060 TIMELESSQ9UNS1 1208 aa17.43■□□□□ 0.38
GTF2A2-202ENST00000396060 ANKRD50Q9ULJ7 1429 aa17.41■□□□□ 0.38
GTF2A2-202ENST00000396060 FANCAO15360 1455 aa17.4■□□□□ 0.38
GTF2A2-202ENST00000396060 RTEL1-TNFRSF6BF6WH68 1400 aa17.38■□□□□ 0.37
GTF2A2-202ENST00000396060 KIF15Q9NS87 1388 aa17.38■□□□□ 0.37
GTF2A2-202ENST00000396060 CD109Q6YHK3 1445 aa17.38■□□□□ 0.37
GTF2A2-202ENST00000396060 PLXNC1O60486 1568 aa17.37■□□□□ 0.37
GTF2A2-202ENST00000396060 GLI2P10070 1586 aa17.37■□□□□ 0.37
GTF2A2-202ENST00000396060 MPHOSPH9Q99550 1183 aa17.36■□□□□ 0.37
GTF2A2-202ENST00000396060 TRAPPC8Q9Y2L5 1435 aa17.36■□□□□ 0.37
GTF2A2-202ENST00000396060 DENND4BO75064 1496 aaPredicted RBP17.36■□□□□ 0.37
GTF2A2-202ENST00000396060 TRIM52Q96A61 297 aa17.36■□□□□ 0.37
GTF2A2-202ENST00000396060 CFAP74Q9C0B2 1584 aa17.33■□□□□ 0.37
GTF2A2-202ENST00000396060 KDM5DQ9BY66 1539 aa17.33■□□□□ 0.36
GTF2A2-202ENST00000396060 ADGRL1O94910 1474 aa17.32■□□□□ 0.36
GTF2A2-202ENST00000396060 NEO1Q92859 1461 aa17.32■□□□□ 0.36
GTF2A2-202ENST00000396060 SCAPERQ9BY12 1400 aa17.32■□□□□ 0.36
GTF2A2-202ENST00000396060 DUOX2Q9NRD8 1548 aa17.31■□□□□ 0.36
GTF2A2-202ENST00000396060 PZPP20742 1482 aa17.31■□□□□ 0.36
GTF2A2-202ENST00000396060 SPAG9O60271 1321 aaKnown RBP17.3■□□□□ 0.36
GTF2A2-202ENST00000396060 SIN3AQ96ST3 1273 aa17.29■□□□□ 0.36
GTF2A2-202ENST00000396060 ERBINQ96RT1 1412 aa17.29■□□□□ 0.36
GTF2A2-202ENST00000396060 MAP3K4Q9Y6R4 1608 aa17.29■□□□□ 0.36
GTF2A2-202ENST00000396060 AFAP1Q8N556 730 aa17.28■□□□□ 0.36
GTF2A2-202ENST00000396060 ANKRD30BQ9BXX2 1392 aa17.27■□□□□ 0.36
GTF2A2-202ENST00000396060 SLC4A1APQ9BWU0 796 aaKnown RBP17.27■□□□□ 0.35
GTF2A2-202ENST00000396060 ZFYVE16Q7Z3T8 1539 aa17.27■□□□□ 0.35
GTF2A2-202ENST00000396060 INO80Q9ULG1 1556 aaPredicted RBP17.25■□□□□ 0.35
GTF2A2-202ENST00000396060 ZNF518AQ6AHZ1 1483 aa17.25■□□□□ 0.35
GTF2A2-202ENST00000396060 NUP155O75694 1391 aa17.24■□□□□ 0.35
GTF2A2-202ENST00000396060 UNC13BO14795 1591 aa17.24■□□□□ 0.35
GTF2A2-202ENST00000396060 DIP2BQ9P265 1576 aa17.24■□□□□ 0.35
GTF2A2-202ENST00000396060 ATP7AQ04656 1500 aa17.23■□□□□ 0.35
GTF2A2-202ENST00000396060 POGZQ7Z3K3 1410 aa17.22■□□□□ 0.35
GTF2A2-202ENST00000396060 KDM5CP41229 1560 aa17.22■□□□□ 0.35
GTF2A2-202ENST00000396060 MAGI2Q86UL8 1455 aa17.22■□□□□ 0.35
GTF2A2-202ENST00000396060 MLH3Q9UHC1 1453 aa17.22■□□□□ 0.35
GTF2A2-202ENST00000396060 NEUROD1Q13562 356 aa17.22■□□□□ 0.35
GTF2A2-202ENST00000396060 PPP1R15AO75807 674 aaPredicted RBP17.21■□□□□ 0.35
GTF2A2-202ENST00000396060 FAM69CQ0P6D2 419 aa17.19■□□□□ 0.34
GTF2A2-202ENST00000396060 DHX29Q7Z478 1369 aaKnown RBP17.19■□□□□ 0.34
GTF2A2-202ENST00000396060 PKD2Q13563 968 aa17.19■□□□□ 0.34
GTF2A2-202ENST00000396060 RPRD2Q5VT52 1461 aaKnown RBP17.18■□□□□ 0.34
GTF2A2-202ENST00000396060 KIDINS220Q9ULH0 1771 aa17.18■□□□□ 0.34
GTF2A2-202ENST00000396060 TONSLQ96HA7 1378 aa17.17■□□□□ 0.34
GTF2A2-202ENST00000396060 FAM135AQ9P2D6 1515 aa17.17■□□□□ 0.34
GTF2A2-202ENST00000396060 ZNF316A6NFI3 1004 aaPredicted RBP17.17■□□□□ 0.34
GTF2A2-202ENST00000396060 IQGAP3Q86VI3 1631 aa17.16■□□□□ 0.34
GTF2A2-202ENST00000396060 EIF2AK4Q9P2K8 1649 aaKnown RBP17.15■□□□□ 0.34
GTF2A2-202ENST00000396060 FOXD1Q16676 465 aa17.15■□□□□ 0.34
GTF2A2-202ENST00000396060 TEX14Q8IWB6 1497 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms