RNA–Protein interactions for RNA: ENST00000395990.6

CASC1-204, Transcript of cancer susceptibility 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CASC1, Length 2,417 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-204ENST00000395990 LRRIQ1Q96JM4 1722 aa7.91□□□□□ -1.14
CASC1-204ENST00000395990 CDK11AQ9UQ88 783 aaPredicted RBP7.89□□□□□ -1.15
CASC1-204ENST00000395990 ABCA9Q8IUA7 1624 aa7.89□□□□□ -1.15
CASC1-204ENST00000395990 CCDC18Q5T9S5 1454 aa7.89□□□□□ -1.15
CASC1-204ENST00000395990 CFAP43Q8NDM7 1665 aa7.89□□□□□ -1.15
CASC1-204ENST00000395990 ATXN8OSP0DMR3 200 aa7.89□□□□□ -1.15
CASC1-204ENST00000395990 MAGI3Q5TCQ9 1506 aa7.89□□□□□ -1.15
CASC1-204ENST00000395990 APLP2Q06481 763 aa7.88□□□□□ -1.15
CASC1-204ENST00000395990 TEX14Q8IWB6 1497 aa7.88□□□□□ -1.15
CASC1-204ENST00000395990 TROQ12816 1431 aaPredicted RBP7.88□□□□□ -1.15
CASC1-204ENST00000395990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.88□□□□□ -1.15
CASC1-204ENST00000395990 COL17A1Q9UMD9 1497 aaPredicted RBP7.88□□□□□ -1.15
CASC1-204ENST00000395990 SPINK5Q9NQ38 1064 aaPredicted RBP7.88□□□□□ -1.15
CASC1-204ENST00000395990 ATF5Q9Y2D1 282 aaPredicted RBP7.87□□□□□ -1.15
CASC1-204ENST00000395990 VPS8Q8N3P4 1428 aa7.87□□□□□ -1.15
CASC1-204ENST00000395990 TTC37Q6PGP7 1564 aa7.87□□□□□ -1.15
CASC1-204ENST00000395990 KDM6BO15054 1643 aa7.86□□□□□ -1.15
CASC1-204ENST00000395990 KIF14Q15058 1648 aa7.86□□□□□ -1.15
CASC1-204ENST00000395990 CACNB1Q02641 598 aaPredicted RBP7.86□□□□□ -1.15
CASC1-204ENST00000395990 CAPN15O75808 1086 aa7.83□□□□□ -1.16
CASC1-204ENST00000395990 PLCH2O75038 1416 aa7.83□□□□□ -1.16
CASC1-204ENST00000395990 FANCAO15360 1455 aa7.83□□□□□ -1.16
CASC1-204ENST00000395990 NEO1Q92859 1461 aa7.83□□□□□ -1.16
CASC1-204ENST00000395990 MTUS2Q5JR59 1369 aa7.82□□□□□ -1.16
CASC1-204ENST00000395990 ARAP3Q8WWN8 1544 aa7.82□□□□□ -1.16
CASC1-204ENST00000395990 RAPGEF3O95398 923 aa7.82□□□□□ -1.16
CASC1-204ENST00000395990 PHLDB1Q86UU1 1377 aa7.82□□□□□ -1.16
CASC1-204ENST00000395990 AKNAQ7Z591 1439 aa7.81□□□□□ -1.16
CASC1-204ENST00000395990 TIAM1Q13009 1591 aa7.81□□□□□ -1.16
CASC1-204ENST00000395990 KANK4Q5T7N3 995 aaPredicted RBP7.8□□□□□ -1.16
CASC1-204ENST00000395990 MYO5CQ9NQX4 1742 aa7.8□□□□□ -1.16
CASC1-204ENST00000395990 EFCAB2Q5VUJ9 269 aa7.8□□□□□ -1.16
CASC1-204ENST00000395990 ARHGAP5Q13017 1502 aa7.79□□□□□ -1.16
CASC1-204ENST00000395990 EHBP1L1Q8N3D4 1523 aa7.79□□□□□ -1.16
CASC1-204ENST00000395990 ZNF219Q9P2Y4 722 aaPredicted RBP7.79□□□□□ -1.16
CASC1-204ENST00000395990 GPATCH8Q9UKJ3 1502 aaKnown RBP7.79□□□□□ -1.16
CASC1-204ENST00000395990 ADGRL1O94910 1474 aa7.79□□□□□ -1.16
CASC1-204ENST00000395990 LRRC9Q6ZRR7 1453 aa7.79□□□□□ -1.16
CASC1-204ENST00000395990 SCAPERQ9BY12 1400 aa7.78□□□□□ -1.16
CASC1-204ENST00000395990 FRMPD1Q5SYB0 1578 aa7.78□□□□□ -1.16
CASC1-204ENST00000395990 CFAP74Q9C0B2 1584 aa7.78□□□□□ -1.16
CASC1-204ENST00000395990 CDC42BPBQ9Y5S2 1711 aa7.78□□□□□ -1.16
CASC1-204ENST00000395990 DENND4BO75064 1496 aaPredicted RBP7.78□□□□□ -1.16
CASC1-204ENST00000395990 MAP3K1Q13233 1512 aa7.78□□□□□ -1.16
CASC1-204ENST00000395990 PREX2Q70Z35 1606 aa7.78□□□□□ -1.16
CASC1-204ENST00000395990 CCNB3Q8WWL7 1395 aa7.78□□□□□ -1.16
CASC1-204ENST00000395990 CDC42BPAQ5VT25 1732 aa7.77□□□□□ -1.17
CASC1-204ENST00000395990 NCOA2Q15596 1464 aa7.77□□□□□ -1.17
CASC1-204ENST00000395990 CFDP1Q9UEE9 299 aaPredicted RBP7.77□□□□□ -1.17
CASC1-204ENST00000395990 ZNF777Q9ULD5 760 aaPredicted RBP7.77□□□□□ -1.17
CASC1-204ENST00000395990 POGZQ7Z3K3 1410 aa7.76□□□□□ -1.17
CASC1-204ENST00000395990 ARHGEF12Q9NZN5 1544 aa7.76□□□□□ -1.17
CASC1-204ENST00000395990 RICTORQ6R327 1708 aa7.76□□□□□ -1.17
CASC1-204ENST00000395990 AFAP1Q8N556 730 aa7.76□□□□□ -1.17
CASC1-204ENST00000395990 ZNF644Q9H582 1327 aaPredicted RBP7.75□□□□□ -1.17
CASC1-204ENST00000395990 SUPT6HQ7KZ85 1726 aaKnown RBP7.75□□□□□ -1.17
CASC1-204ENST00000395990 ABCC1P33527 1531 aa7.75□□□□□ -1.17
CASC1-204ENST00000395990 SAMD9LQ8IVG5 1584 aa7.74□□□□□ -1.17
CASC1-204ENST00000395990 TRAPPC8Q9Y2L5 1435 aa7.74□□□□□ -1.17
CASC1-204ENST00000395990 HNRNPMP52272 730 aaKnown RBP eCLIP7.73□□□□□ -1.17
CASC1-204ENST00000395990 ZMYM4Q5VZL5 1548 aa7.73□□□□□ -1.17
CASC1-204ENST00000395990 ZNF518AQ6AHZ1 1483 aa7.73□□□□□ -1.17
CASC1-204ENST00000395990 YEATS2Q9ULM3 1422 aa7.73□□□□□ -1.17
CASC1-204ENST00000395990 SYCP2Q9BX26 1530 aa7.73□□□□□ -1.17
CASC1-204ENST00000395990 KDM4FA0A1W2PPD8 638 aa7.72□□□□□ -1.17
CASC1-204ENST00000395990 KDM5CP41229 1560 aa7.72□□□□□ -1.17
CASC1-204ENST00000395990 ITSN2Q9NZM3 1697 aa7.72□□□□□ -1.17
CASC1-204ENST00000395990 KIAA1107Q9UPP5 1409 aa7.72□□□□□ -1.17
CASC1-204ENST00000395990 ARHGEF40Q8TER5 1519 aa7.71□□□□□ -1.17
CASC1-204ENST00000395990 MAGI2Q86UL8 1455 aa7.71□□□□□ -1.17
CASC1-204ENST00000395990 ZFYVE16Q7Z3T8 1539 aa7.71□□□□□ -1.18
CASC1-204ENST00000395990 MYOM3Q5VTT5 1437 aa7.71□□□□□ -1.18
CASC1-204ENST00000395990 PLEKHH2Q8IVE3 1493 aa7.7□□□□□ -1.18
CASC1-204ENST00000395990 MBD5Q9P267 1494 aa7.7□□□□□ -1.18
CASC1-204ENST00000395990 CAMSAP2Q08AD1 1489 aa7.7□□□□□ -1.18
CASC1-204ENST00000395990 ABCB7O75027 752 aa7.7□□□□□ -1.18
CASC1-204ENST00000395990 DSG3P32926 999 aa7.7□□□□□ -1.18
CASC1-204ENST00000395990 PPARGC1BQ86YN6 1023 aaKnown RBP7.7□□□□□ -1.18
CASC1-204ENST00000395990 MLH3Q9UHC1 1453 aa7.69□□□□□ -1.18
CASC1-204ENST00000395990 MYT1LQ9UL68 1186 aa7.69□□□□□ -1.18
CASC1-204ENST00000395990 HECW2Q9P2P5 1572 aa7.69□□□□□ -1.18
CASC1-204ENST00000395990 ARID4BQ4LE39 1312 aaPredicted RBP7.69□□□□□ -1.18
CASC1-204ENST00000395990 MIA2Q96PC5 1412 aa7.68□□□□□ -1.18
CASC1-204ENST00000395990 ATP10AO60312 1499 aa7.68□□□□□ -1.18
CASC1-204ENST00000395990 SPAG9O60271 1321 aaKnown RBP7.68□□□□□ -1.18
CASC1-204ENST00000395990 SIGLEC1Q9BZZ2 1709 aa7.68□□□□□ -1.18
CASC1-204ENST00000395990 POLA2Q14181 598 aa7.68□□□□□ -1.18
CASC1-204ENST00000395990 KIDINS220Q9ULH0 1771 aa7.67□□□□□ -1.18
CASC1-204ENST00000395990 DIP2CQ9Y2E4 1556 aa7.67□□□□□ -1.18
CASC1-204ENST00000395990 ABCA6Q8N139 1617 aa7.67□□□□□ -1.18
CASC1-204ENST00000395990 FGD6Q6ZV73 1430 aa7.67□□□□□ -1.18
CASC1-204ENST00000395990 C9orf84Q5VXU9 1444 aa7.66□□□□□ -1.18
CASC1-204ENST00000395990 CCDC141Q6ZP82 1450 aa7.66□□□□□ -1.18
CASC1-204ENST00000395990 ATP7AQ04656 1500 aa7.66□□□□□ -1.18
CASC1-204ENST00000395990 INO80Q9ULG1 1556 aaPredicted RBP7.65□□□□□ -1.18
CASC1-204ENST00000395990 RSPH4AQ5TD94 716 aa7.65□□□□□ -1.18
CASC1-204ENST00000395990 MLECQ14165 292 aa7.64□□□□□ -1.19
CASC1-204ENST00000395990 ARHGEF5Q12774 1597 aa7.64□□□□□ -1.19
CASC1-204ENST00000395990 PTPN23Q9H3S7 1636 aa7.64□□□□□ -1.19
CASC1-204ENST00000395990 RTEL1-TNFRSF6BF6WH68 1400 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms