RNA–Protein interactions for RNA: ENST00000395812.6

CAST-206, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-206ENST00000395812 POLA1P09884 1462 aaPredicted RBP17.11■□□□□ 0.33
CAST-206ENST00000395812 NUTM2DQ5VT03 806 aaPredicted RBP17.09■□□□□ 0.33
CAST-206ENST00000395812 MAPK8IP3Q9UPT6 1336 aa17.08■□□□□ 0.33
CAST-206ENST00000395812 SYNJ2O15056 1496 aa17.08■□□□□ 0.32
CAST-206ENST00000395812 SIN3AQ96ST3 1273 aa17.08■□□□□ 0.32
CAST-206ENST00000395812 VGFO15240 615 aaPredicted RBP17.07■□□□□ 0.32
CAST-206ENST00000395812 MPHOSPH9Q99550 1183 aa17.07■□□□□ 0.32
CAST-206ENST00000395812 TNNT2P45379 298 aaPredicted RBP17.06■□□□□ 0.32
CAST-206ENST00000395812 HNRNPUQ00839 825 aaKnown RBP eCLIP17.06■□□□□ 0.32
CAST-206ENST00000395812 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.06■□□□□ 0.32
CAST-206ENST00000395812 SETD5Q9C0A6 1442 aa17.04■□□□□ 0.32
CAST-206ENST00000395812 FOXD1Q16676 465 aa17.04■□□□□ 0.32
CAST-206ENST00000395812 RUSC2Q8N2Y8 1516 aa17.03■□□□□ 0.32
CAST-206ENST00000395812 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.03■□□□□ 0.32
CAST-206ENST00000395812 U2SURPO15042 1029 aaKnown RBP17.02■□□□□ 0.31
CAST-206ENST00000395812 AFAP1Q8N556 730 aa17.02■□□□□ 0.31
CAST-206ENST00000395812 PNNQ9H307 717 aaKnown RBP17.01■□□□□ 0.31
CAST-206ENST00000395812 NUTM2FA1L443 756 aa17.01■□□□□ 0.31
CAST-206ENST00000395812 DNMBPQ6XZF7 1577 aa17■□□□□ 0.31
CAST-206ENST00000395812 POGZQ7Z3K3 1410 aa17■□□□□ 0.31
CAST-206ENST00000395812 MEX3CQ5U5Q3 659 aaKnown RBP16.99■□□□□ 0.31
CAST-206ENST00000395812 TIMELESSQ9UNS1 1208 aa16.98■□□□□ 0.31
CAST-206ENST00000395812 ATF3P18847 181 aa16.97■□□□□ 0.31
CAST-206ENST00000395812 MYH16Q9H6N6 1097 aa16.97■□□□□ 0.31
CAST-206ENST00000395812 TERF2IPQ9NYB0 399 aa16.97■□□□□ 0.31
CAST-206ENST00000395812 MORC1Q86VD1 984 aa16.97■□□□□ 0.31
CAST-206ENST00000395812 THEMISQ8N1K5 641 aaPredicted RBP16.94■□□□□ 0.3
CAST-206ENST00000395812 EIF3AQ14152 1382 aaKnown RBP16.94■□□□□ 0.3
CAST-206ENST00000395812 RAPGEF3O95398 923 aa16.94■□□□□ 0.3
CAST-206ENST00000395812 NEUROD2Q15784 382 aa16.94■□□□□ 0.3
CAST-206ENST00000395812 UACAQ9BZF9 1416 aa16.94■□□□□ 0.3
CAST-206ENST00000395812 LAS1LQ9Y4W2 734 aaKnown RBP16.93■□□□□ 0.3
CAST-206ENST00000395812 MYOM3Q5VTT5 1437 aa16.92■□□□□ 0.3
CAST-206ENST00000395812 TRAK1Q9UPV9 953 aa16.92■□□□□ 0.3
CAST-206ENST00000395812 KIAA0586Q9BVV6 1533 aa16.91■□□□□ 0.3
CAST-206ENST00000395812 ROCK2O75116 1388 aaKnown RBP16.9■□□□□ 0.3
CAST-206ENST00000395812 CCDC144AA2RUR9 1427 aa16.9■□□□□ 0.3
CAST-206ENST00000395812 RTF1Q92541 710 aaKnown RBP16.9■□□□□ 0.3
CAST-206ENST00000395812 PRDM2Q13029 1718 aa16.9■□□□□ 0.3
CAST-206ENST00000395812 MAGI1Q96QZ7 1491 aaPredicted RBP16.9■□□□□ 0.3
CAST-206ENST00000395812 CC2D1BQ5T0F9 858 aaKnown RBP16.89■□□□□ 0.3
CAST-206ENST00000395812 EVA1CP58658 441 aa16.89■□□□□ 0.29
CAST-206ENST00000395812 TXNDC2Q86VQ3 553 aa16.89■□□□□ 0.29
CAST-206ENST00000395812 PHF23Q9BUL5 403 aaPredicted RBP16.89■□□□□ 0.29
CAST-206ENST00000395812 ARHGAP5Q13017 1502 aa16.88■□□□□ 0.29
CAST-206ENST00000395812 KIF15Q9NS87 1388 aa16.87■□□□□ 0.29
CAST-206ENST00000395812 AMPHP49418 695 aa16.87■□□□□ 0.29
CAST-206ENST00000395812 PROSER2Q86WR7 435 aaPredicted RBP16.87■□□□□ 0.29
CAST-206ENST00000395812 CUX1P39880 1505 aa16.86■□□□□ 0.29
CAST-206ENST00000395812 ZNF644Q9H582 1327 aaPredicted RBP16.86■□□□□ 0.29
CAST-206ENST00000395812 ANKLE2Q86XL3 938 aa16.84■□□□□ 0.29
CAST-206ENST00000395812 PSME1Q06323 249 aa16.84■□□□□ 0.29
CAST-206ENST00000395812 RAB3GAP2Q9H2M9 1393 aa16.84■□□□□ 0.29
CAST-206ENST00000395812 SCAPERQ9BY12 1400 aa16.84■□□□□ 0.29
CAST-206ENST00000395812 ABCA10Q8WWZ4 1543 aa16.83■□□□□ 0.28
CAST-206ENST00000395812 CD109Q6YHK3 1445 aa16.82■□□□□ 0.28
CAST-206ENST00000395812 SYNJ1O43426 1573 aa16.82■□□□□ 0.28
CAST-206ENST00000395812 TMX4Q9H1E5 349 aaPredicted RBP16.81■□□□□ 0.28
CAST-206ENST00000395812 ZNF330Q9Y3S2 320 aaPredicted RBP16.8■□□□□ 0.28
CAST-206ENST00000395812 PLEKHH2Q8IVE3 1493 aa16.79■□□□□ 0.28
CAST-206ENST00000395812 LTV1Q96GA3 475 aaPredicted RBP16.79■□□□□ 0.28
CAST-206ENST00000395812 CHMP4AQ9BY43 222 aa16.79■□□□□ 0.28
CAST-206ENST00000395812 GRIN2AQ12879 1464 aa16.78■□□□□ 0.28
CAST-206ENST00000395812 CASKIN1Q8WXD9 1431 aa16.77■□□□□ 0.28
CAST-206ENST00000395812 MINK1Q8N4C8 1332 aaPredicted RBP16.77■□□□□ 0.28
CAST-206ENST00000395812 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.77■□□□□ 0.28
CAST-206ENST00000395812 L3MBTL2Q969R5 705 aa16.77■□□□□ 0.28
CAST-206ENST00000395812 ZNF608Q9ULD9 1512 aaPredicted RBP16.77■□□□□ 0.27
CAST-206ENST00000395812 URB2Q14146 1524 aaKnown RBP16.77■□□□□ 0.27
CAST-206ENST00000395812 STAC3Q96MF2 364 aa16.77■□□□□ 0.27
CAST-206ENST00000395812 UPF2Q9HAU5 1272 aaKnown RBP16.76■□□□□ 0.27
CAST-206ENST00000395812 DMRT2Q9Y5R5 561 aa16.76■□□□□ 0.27
CAST-206ENST00000395812 GOLGA2Q08379 1002 aa16.76■□□□□ 0.27
CAST-206ENST00000395812 EVC2Q86UK5 1308 aa16.76■□□□□ 0.27
CAST-206ENST00000395812 TOP2BQ02880 1626 aa16.75■□□□□ 0.27
CAST-206ENST00000395812 TROQ12816 1431 aaPredicted RBP16.75■□□□□ 0.27
CAST-206ENST00000395812 SLC52A1Q9NWF4 448 aa16.75■□□□□ 0.27
CAST-206ENST00000395812 U2AF1L5P0DN76 240 aaPredicted RBP16.73■□□□□ 0.27
CAST-206ENST00000395812 U2AF1Q01081 240 aaKnown RBP eCLIP16.73■□□□□ 0.27
CAST-206ENST00000395812 FTSJ3Q8IY81 847 aaKnown RBP16.73■□□□□ 0.27
CAST-206ENST00000395812 ANKRD50Q9ULJ7 1429 aa16.72■□□□□ 0.27
CAST-206ENST00000395812 COG3Q96JB2 828 aa16.71■□□□□ 0.27
CAST-206ENST00000395812 DHX57Q6P158 1386 aaKnown RBP16.71■□□□□ 0.27
CAST-206ENST00000395812 HSPA5P11021 654 aaKnown RBP16.71■□□□□ 0.27
CAST-206ENST00000395812 HSP90AA1P07900 732 aaKnown RBP16.71■□□□□ 0.26
CAST-206ENST00000395812 PIP4K2BP78356 416 aa16.7■□□□□ 0.26
CAST-206ENST00000395812 CALD1Q05682 793 aaKnown RBP16.69■□□□□ 0.26
CAST-206ENST00000395812 CHMP4BQ9H444 224 aaKnown RBP16.69■□□□□ 0.26
CAST-206ENST00000395812 ERICH3Q5RHP9 1530 aa16.69■□□□□ 0.26
CAST-206ENST00000395812 DCAF8L1A6NGE4 600 aa16.68■□□□□ 0.26
CAST-206ENST00000395812 FYCO1Q9BQS8 1478 aa16.68■□□□□ 0.26
CAST-206ENST00000395812 MSH5O43196 834 aa16.68■□□□□ 0.26
CAST-206ENST00000395812 FGD6Q6ZV73 1430 aa16.68■□□□□ 0.26
CAST-206ENST00000395812 EFCAB5A4FU69 1503 aa16.68■□□□□ 0.26
CAST-206ENST00000395812 GTF2E1P29083 439 aaPredicted RBP16.67■□□□□ 0.26
CAST-206ENST00000395812 OS9Q13438 667 aaPredicted RBP16.67■□□□□ 0.26
CAST-206ENST00000395812 PEG3Q9GZU2 1588 aa16.67■□□□□ 0.26
CAST-206ENST00000395812 PRXQ9BXM0 1461 aa16.66■□□□□ 0.26
CAST-206ENST00000395812 KTN1Q86UP2 1357 aaKnown RBP16.65■□□□□ 0.26
CAST-206ENST00000395812 PLB1Q6P1J6 1458 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms