RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 CSPP1Q1MSJ5 1256 aa10.05□□□□□ -0.8
TRPS1-203ENST00000395715 KDM2AQ9Y2K7 1162 aa10.05□□□□□ -0.8
TRPS1-203ENST00000395715 FRAT1Q92837 279 aaPredicted RBP10.04□□□□□ -0.8
TRPS1-203ENST00000395715 ANO8Q9HCE9 1232 aaPredicted RBP10.04□□□□□ -0.8
TRPS1-203ENST00000395715 H0YHG0 523 aa10.04□□□□□ -0.8
TRPS1-203ENST00000395715 CWC15Q9P013 229 aaKnown RBP10.04□□□□□ -0.8
TRPS1-203ENST00000395715 RBM19Q9Y4C8 960 aaKnown RBP10.04□□□□□ -0.8
TRPS1-203ENST00000395715 TSR1Q2NL82 804 aaKnown RBP10.04□□□□□ -0.8
TRPS1-203ENST00000395715 MS4A1P11836 297 aa10.04□□□□□ -0.8
TRPS1-203ENST00000395715 HSP90AB3PQ58FF7 597 aa10.04□□□□□ -0.8
TRPS1-203ENST00000395715 FAM13BQ9NYF5 915 aa10.03□□□□□ -0.8
TRPS1-203ENST00000395715 B4GALNT3Q6L9W6 998 aa10.03□□□□□ -0.8
TRPS1-203ENST00000395715 CFAP53Q96M91 514 aa10.02□□□□□ -0.81
TRPS1-203ENST00000395715 SLKQ9H2G2 1235 aaPredicted RBP10.02□□□□□ -0.81
TRPS1-203ENST00000395715 AK7Q96M32 723 aa10.02□□□□□ -0.81
TRPS1-203ENST00000395715 RUFY1Q96T51 708 aa10.02□□□□□ -0.81
TRPS1-203ENST00000395715 LMOD2Q6P5Q4 547 aa10.01□□□□□ -0.81
TRPS1-203ENST00000395715 KIAA1211Q6ZU35 1233 aa10.01□□□□□ -0.81
TRPS1-203ENST00000395715 CDR1P51861 262 aa10.01□□□□□ -0.81
TRPS1-203ENST00000395715 DYDC1Q8WWB3 177 aa10.01□□□□□ -0.81
TRPS1-203ENST00000395715 CCDC66A2RUB6 948 aa10.01□□□□□ -0.81
TRPS1-203ENST00000395715 DCTN1Q14203 1278 aa10.01□□□□□ -0.81
TRPS1-203ENST00000395715 ZNF592Q92610 1267 aa10□□□□□ -0.81
TRPS1-203ENST00000395715 PES1O00541 588 aaKnown RBP10□□□□□ -0.81
TRPS1-203ENST00000395715 KRI1Q8N9T8 703 aaKnown RBP10□□□□□ -0.81
TRPS1-203ENST00000395715 RASSF8Q8NHQ8 419 aa9.99□□□□□ -0.81
TRPS1-203ENST00000395715 SENP3-EIF4A1A0A087X0R7 540 aa9.98□□□□□ -0.81
TRPS1-203ENST00000395715 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.98□□□□□ -0.81
TRPS1-203ENST00000395715 MAPK8IP3Q9UPT6 1336 aa9.98□□□□□ -0.81
TRPS1-203ENST00000395715 ACBD3Q9H3P7 528 aa9.98□□□□□ -0.81
TRPS1-203ENST00000395715 TPM1P09493 284 aa9.97□□□□□ -0.81
TRPS1-203ENST00000395715 TPD52L1Q16890 204 aaPredicted RBP9.97□□□□□ -0.81
TRPS1-203ENST00000395715 NEXNQ0ZGT2 675 aa9.97□□□□□ -0.81
TRPS1-203ENST00000395715 GOLGA6L19H0YKK7 550 aa9.97□□□□□ -0.81
TRPS1-203ENST00000395715 CHIC2Q9UKJ5 165 aa9.97□□□□□ -0.81
TRPS1-203ENST00000395715 HIRIP3Q9BW71 556 aaPredicted RBP9.97□□□□□ -0.81
TRPS1-203ENST00000395715 EIF4G2P78344 907 aaKnown RBP eCLIP9.96□□□□□ -0.812e-6■■■■■ 26.9
TRPS1-203ENST00000395715 NEUROD2Q15784 382 aa9.96□□□□□ -0.81
TRPS1-203ENST00000395715 HSP90B2PQ58FF3 399 aa9.96□□□□□ -0.81
TRPS1-203ENST00000395715 TPM2P07951 284 aa9.95□□□□□ -0.82
TRPS1-203ENST00000395715 ARGLU1Q9NWB6 273 aaPredicted RBP9.95□□□□□ -0.82
TRPS1-203ENST00000395715 WWC1Q8IX03 1113 aa9.95□□□□□ -0.82
TRPS1-203ENST00000395715 MTERF4Q7Z6M4 381 aaKnown RBP9.94□□□□□ -0.82
TRPS1-203ENST00000395715 DDX11L8A8MPP1 907 aa9.93□□□□□ -0.82
TRPS1-203ENST00000395715 KNSTRNQ9Y448 316 aa9.93□□□□□ -0.82
TRPS1-203ENST00000395715 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.93□□□□□ -0.82
TRPS1-203ENST00000395715 KIF3AQ9Y496 699 aa9.93□□□□□ -0.82
TRPS1-203ENST00000395715 HOMER1Q86YM7 354 aa9.92□□□□□ -0.82
TRPS1-203ENST00000395715 IPO7O95373 1038 aaKnown RBP9.92□□□□□ -0.82
TRPS1-203ENST00000395715 KCNH8Q96L42 1107 aa9.92□□□□□ -0.82
TRPS1-203ENST00000395715 INCENPQ9NQS7 918 aa9.92□□□□□ -0.82
TRPS1-203ENST00000395715 IPO9Q96P70 1041 aaKnown RBP9.91□□□□□ -0.82
TRPS1-203ENST00000395715 ZRSR2Q15696 482 aaKnown RBP9.91□□□□□ -0.82
TRPS1-203ENST00000395715 LEKR1Q6ZMV7 388 aa9.91□□□□□ -0.82
TRPS1-203ENST00000395715 BECN2A8MW95 431 aa9.91□□□□□ -0.82
TRPS1-203ENST00000395715 GSE1Q14687 1217 aa9.91□□□□□ -0.82
TRPS1-203ENST00000395715 TAF3Q5VWG9 929 aa9.9□□□□□ -0.82
TRPS1-203ENST00000395715 KIF16BQ96L93 1317 aa9.9□□□□□ -0.82
TRPS1-203ENST00000395715 TRHP20396 242 aaPredicted RBP9.9□□□□□ -0.82
TRPS1-203ENST00000395715 TSPY4P0CV99 314 aa9.9□□□□□ -0.83
TRPS1-203ENST00000395715 TSPY10P0CW01 314 aa9.9□□□□□ -0.83
TRPS1-203ENST00000395715 SF3A1Q15459 793 aaKnown RBP9.89□□□□□ -0.83
TRPS1-203ENST00000395715 NUDCQ9Y266 331 aa9.89□□□□□ -0.83
TRPS1-203ENST00000395715 TSPYL1Q9H0U9 437 aa9.89□□□□□ -0.83
TRPS1-203ENST00000395715 BCCIPQ9P287 314 aaKnown RBP eCLIP9.89□□□□□ -0.83
TRPS1-203ENST00000395715 TCERG1O14776 1098 aaKnown RBP9.88□□□□□ -0.83
TRPS1-203ENST00000395715 DEF6Q9H4E7 631 aa9.88□□□□□ -0.83
TRPS1-203ENST00000395715 CHMP7Q8WUX9 453 aaPredicted RBP9.88□□□□□ -0.83
TRPS1-203ENST00000395715 FAM43AQ8N2R8 423 aa9.88□□□□□ -0.83
TRPS1-203ENST00000395715 GOLGA6L7A0A1B0GV03 622 aa9.87□□□□□ -0.83
TRPS1-203ENST00000395715 PCMTD1Q96MG8 357 aaPredicted RBP9.87□□□□□ -0.83
TRPS1-203ENST00000395715 SKOR2Q2VWA4 1001 aaPredicted RBP9.87□□□□□ -0.83
TRPS1-203ENST00000395715 CLASRPQ8N2M8 674 aaKnown RBP9.87□□□□□ -0.83
TRPS1-203ENST00000395715 MNS1Q8NEH6 495 aa9.87□□□□□ -0.83
TRPS1-203ENST00000395715 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.87□□□□□ -0.831e-6■■■■■ 160.6
TRPS1-203ENST00000395715 CDCA8Q53HL2 280 aa9.86□□□□□ -0.83
TRPS1-203ENST00000395715 USP8P40818 1118 aa9.86□□□□□ -0.83
TRPS1-203ENST00000395715 VPS53Q5VIR6 699 aa9.86□□□□□ -0.83
TRPS1-203ENST00000395715 ERCC4Q92889 916 aaPredicted RBP9.86□□□□□ -0.83
TRPS1-203ENST00000395715 APBB1O00213 710 aa9.86□□□□□ -0.83
TRPS1-203ENST00000395715 MFAP1P55081 439 aaKnown RBP9.86□□□□□ -0.83
TRPS1-203ENST00000395715 GIMAP7Q8NHV1 300 aa9.85□□□□□ -0.83
TRPS1-203ENST00000395715 FOXD4L1Q9NU39 408 aa9.85□□□□□ -0.83
TRPS1-203ENST00000395715 MARCH6O60337 910 aa9.85□□□□□ -0.83
TRPS1-203ENST00000395715 DDX49Q9Y6V7 483 aaKnown RBP9.85□□□□□ -0.83
TRPS1-203ENST00000395715 KIAA0754O94854 1291 aa9.85□□□□□ -0.83
TRPS1-203ENST00000395715 ST18O60284 1047 aa9.85□□□□□ -0.83
TRPS1-203ENST00000395715 MAPK8IP2Q13387 824 aaPredicted RBP9.84□□□□□ -0.83
TRPS1-203ENST00000395715 MYO6Q9UM54 1294 aa9.84□□□□□ -0.83
TRPS1-203ENST00000395715 DIAPH3Q9NSV4 1193 aa9.84□□□□□ -0.83
TRPS1-203ENST00000395715 ANKRD20A12PQ8NF67 263 aa9.84□□□□□ -0.83
TRPS1-203ENST00000395715 H3BQV1 296 aa9.83□□□□□ -0.84
TRPS1-203ENST00000395715 IFFO2Q5TF58 517 aa9.83□□□□□ -0.84
TRPS1-203ENST00000395715 NAP1L1P55209 391 aaKnown RBP9.83□□□□□ -0.84
TRPS1-203ENST00000395715 ODF2Q5BJF6 829 aa9.83□□□□□ -0.84
TRPS1-203ENST00000395715 CCDC173Q0VFZ6 552 aa9.83□□□□□ -0.84
TRPS1-203ENST00000395715 GPATCH3Q96I76 525 aa9.83□□□□□ -0.84
TRPS1-203ENST00000395715 FOXD4L5Q5VV16 416 aaPredicted RBP9.83□□□□□ -0.84
TRPS1-203ENST00000395715 FOXD4L4Q8WXT5 416 aaPredicted RBP9.83□□□□□ -0.84
TRPS1-203ENST00000395715 PRKCSHP14314 528 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms