RNA–Protein interactions for RNA: ENST00000395603.7

ATRX-202, Transcript of ATRX, chromatin remodeler, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATRX, Length 10,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-202ENST00000395603 ATAD2Q6PL18 1390 aa6.78□□□□□ -1.32
ATRX-202ENST00000395603 CT47B1P0C2W7 299 aaPredicted RBP6.78□□□□□ -1.32
ATRX-202ENST00000395603 NCAPD3P42695 1498 aa6.77□□□□□ -1.33
ATRX-202ENST00000395603 CC2D2AQ9P2K1 1620 aa6.77□□□□□ -1.33
ATRX-202ENST00000395603 NCBP3Q53F19 620 aaKnown RBP6.76□□□□□ -1.33
ATRX-202ENST00000395603 GOLGA6L1Q8N7Z2 621 aa6.75□□□□□ -1.33
ATRX-202ENST00000395603 CALRP27797 417 aaKnown RBP6.75□□□□□ -1.33
ATRX-202ENST00000395603 PHF14O94880 888 aa6.75□□□□□ -1.33
ATRX-202ENST00000395603 ZNF326Q5BKZ1 582 aaKnown RBP6.75□□□□□ -1.33
ATRX-202ENST00000395603 NPM1P06748 294 aaKnown RBP eCLIP6.75□□□□□ -1.33
ATRX-202ENST00000395603 LRRFIP1Q32MZ4 808 aaKnown RBP6.75□□□□□ -1.33
ATRX-202ENST00000395603 HFM1A2PYH4 1435 aa6.75□□□□□ -1.33
ATRX-202ENST00000395603 ZMYM4Q5VZL5 1548 aa6.74□□□□□ -1.33
ATRX-202ENST00000395603 TPM3P06753 285 aa6.74□□□□□ -1.33
ATRX-202ENST00000395603 NUDCQ9Y266 331 aa6.74□□□□□ -1.33
ATRX-202ENST00000395603 FYCO1Q9BQS8 1478 aa6.74□□□□□ -1.33
ATRX-202ENST00000395603 CHAF1AQ13111 956 aaPredicted RBP6.74□□□□□ -1.33
ATRX-202ENST00000395603 SKOR2Q2VWA4 1001 aaPredicted RBP6.74□□□□□ -1.33
ATRX-202ENST00000395603 ZMYM3Q14202 1370 aa6.74□□□□□ -1.33
ATRX-202ENST00000395603 LMOD3Q0VAK6 560 aa6.74□□□□□ -1.33
ATRX-202ENST00000395603 RRBP1Q9P2E9 1410 aaKnown RBP6.74□□□□□ -1.33
ATRX-202ENST00000395603 POLR3GLQ9BT43 218 aa6.73□□□□□ -1.33
ATRX-202ENST00000395603 ATP6V1DQ9Y5K8 247 aa6.73□□□□□ -1.33
ATRX-202ENST00000395603 RBM19Q9Y4C8 960 aaKnown RBP6.72□□□□□ -1.33
ATRX-202ENST00000395603 IPO8O15397 1037 aaKnown RBP6.72□□□□□ -1.33
ATRX-202ENST00000395603 RAPGEF2Q9Y4G8 1499 aa6.72□□□□□ -1.33
ATRX-202ENST00000395603 TMED8Q6PL24 325 aaPredicted RBP6.72□□□□□ -1.33
ATRX-202ENST00000395603 MAPK8IP3Q9UPT6 1336 aa6.72□□□□□ -1.33
ATRX-202ENST00000395603 PPP6R1Q9UPN7 881 aa6.71□□□□□ -1.34
ATRX-202ENST00000395603 TUBB4BP68371 445 aa6.71□□□□□ -1.34
ATRX-202ENST00000395603 TCERG1O14776 1098 aaKnown RBP6.71□□□□□ -1.34
ATRX-202ENST00000395603 CDK11BP21127 795 aaKnown RBP6.71□□□□□ -1.34
ATRX-202ENST00000395603 GOLGA6L3A6NEY3 463 aa6.7□□□□□ -1.34
ATRX-202ENST00000395603 MCCP23508 829 aa6.7□□□□□ -1.34
ATRX-202ENST00000395603 NOL10Q9BSC4 688 aaKnown RBP6.7□□□□□ -1.34
ATRX-202ENST00000395603 SNAPC4Q5SXM2 1469 aa6.7□□□□□ -1.34
ATRX-202ENST00000395603 BCANQ96GW7 911 aa6.7□□□□□ -1.34
ATRX-202ENST00000395603 TUBB4AP04350 444 aa6.69□□□□□ -1.34
ATRX-202ENST00000395603 TAF3Q5VWG9 929 aa6.69□□□□□ -1.34
ATRX-202ENST00000395603 TXLNBQ8N3L3 684 aa6.69□□□□□ -1.34
ATRX-202ENST00000395603 PPP4R2Q9NY27 417 aa6.69□□□□□ -1.34
ATRX-202ENST00000395603 HSP90B1P14625 803 aaKnown RBP6.69□□□□□ -1.34
ATRX-202ENST00000395603 CENPJQ9HC77 1338 aaPredicted RBP6.68□□□□□ -1.34
ATRX-202ENST00000395603 EHBP1L1Q8N3D4 1523 aa6.68□□□□□ -1.34
ATRX-202ENST00000395603 MYOM3Q5VTT5 1437 aa6.68□□□□□ -1.34
ATRX-202ENST00000395603 DHX57Q6P158 1386 aaKnown RBP6.68□□□□□ -1.34
ATRX-202ENST00000395603 AEBP1Q8IUX7 1158 aa6.68□□□□□ -1.34
ATRX-202ENST00000395603 PLEKHD1A6NEE1 506 aa6.68□□□□□ -1.34
ATRX-202ENST00000395603 PLCD3Q8N3E9 789 aa6.68□□□□□ -1.34
ATRX-202ENST00000395603 CANXP27824 592 aaKnown RBP6.67□□□□□ -1.34
ATRX-202ENST00000395603 ZRSR1Q15695 479 aaKnown RBP6.67□□□□□ -1.34
ATRX-202ENST00000395603 CCDC141Q6ZP82 1450 aa6.67□□□□□ -1.34
ATRX-202ENST00000395603 TPM2P07951 284 aa6.67□□□□□ -1.34
ATRX-202ENST00000395603 KIF7Q2M1P5 1343 aa6.67□□□□□ -1.34
ATRX-202ENST00000395603 WDR43Q15061 677 aaKnown RBP eCLIP6.67□□□□□ -1.34
ATRX-202ENST00000395603 GTPBP4Q9BZE4 634 aaKnown RBP6.66□□□□□ -1.34
ATRX-202ENST00000395603 TEX14Q8IWB6 1497 aa6.66□□□□□ -1.34
ATRX-202ENST00000395603 CAVIN2O95810 425 aa6.66□□□□□ -1.34
ATRX-202ENST00000395603 NAP1L5Q96NT1 182 aaPredicted RBP6.66□□□□□ -1.34
ATRX-202ENST00000395603 LAMC3Q9Y6N6 1575 aa6.66□□□□□ -1.34
ATRX-202ENST00000395603 ESF1Q9H501 851 aaKnown RBP6.66□□□□□ -1.34
ATRX-202ENST00000395603 GBP4Q96PP9 640 aa6.66□□□□□ -1.34
ATRX-202ENST00000395603 PUS7Q96PZ0 661 aaKnown RBP6.66□□□□□ -1.34
ATRX-202ENST00000395603 PRDM2Q13029 1718 aa6.66□□□□□ -1.34
ATRX-202ENST00000395603 SMG6Q86US8 1419 aaKnown RBP6.66□□□□□ -1.34
ATRX-202ENST00000395603 CREBRFQ8IUR6 639 aa6.65□□□□□ -1.34
ATRX-202ENST00000395603 CAGE1Q8TC20 777 aa6.65□□□□□ -1.34
ATRX-202ENST00000395603 CADPSQ9ULU8 1353 aa6.65□□□□□ -1.34
ATRX-202ENST00000395603 HSP90AA1P07900 732 aaKnown RBP6.65□□□□□ -1.34
ATRX-202ENST00000395603 HECW1Q76N89 1606 aa6.65□□□□□ -1.34
ATRX-202ENST00000395603 TICAM2Q86XR7 235 aa6.65□□□□□ -1.34
ATRX-202ENST00000395603 SOGA1O94964 1423 aa6.65□□□□□ -1.34
ATRX-202ENST00000395603 NT5C2P49902 561 aa6.65□□□□□ -1.34
ATRX-202ENST00000395603 CUX2O14529 1486 aa6.65□□□□□ -1.34
ATRX-202ENST00000395603 POLA1P09884 1462 aaPredicted RBP6.65□□□□□ -1.35
ATRX-202ENST00000395603 HSP90AA2PQ14568 343 aaPredicted RBP6.64□□□□□ -1.35
ATRX-202ENST00000395603 TOP2BQ02880 1626 aa6.64□□□□□ -1.35
ATRX-202ENST00000395603 CGNL1Q0VF96 1302 aa6.64□□□□□ -1.35
ATRX-202ENST00000395603 POLR3GO15318 223 aaPredicted RBP6.64□□□□□ -1.35
ATRX-202ENST00000395603 NKTRP30414 1462 aaKnown RBP6.64□□□□□ -1.35
ATRX-202ENST00000395603 FAM193AP78312 1265 aa6.64□□□□□ -1.35
ATRX-202ENST00000395603 U2SURPO15042 1029 aaKnown RBP6.64□□□□□ -1.35
ATRX-202ENST00000395603 CCP110O43303 1012 aa6.64□□□□□ -1.35
ATRX-202ENST00000395603 MCM2P49736 904 aa6.64□□□□□ -1.35
ATRX-202ENST00000395603 TSPYL1Q9H0U9 437 aa6.64□□□□□ -1.35
ATRX-202ENST00000395603 SOS1Q07889 1333 aaPredicted RBP6.63□□□□□ -1.35
ATRX-202ENST00000395603 TPM4P67936 248 aa6.63□□□□□ -1.35
ATRX-202ENST00000395603 FAM135AQ9P2D6 1515 aa6.63□□□□□ -1.35
ATRX-202ENST00000395603 TMC1Q8TDI8 760 aa6.63□□□□□ -1.35
ATRX-202ENST00000395603 CASKIN1Q8WXD9 1431 aa6.63□□□□□ -1.35
ATRX-202ENST00000395603 PMFBP1Q8TBY8 1022 aa6.63□□□□□ -1.35
ATRX-202ENST00000395603 RSPH6AQ9H0K4 717 aa6.63□□□□□ -1.35
ATRX-202ENST00000395603 GPS2Q13227 327 aa6.62□□□□□ -1.35
ATRX-202ENST00000395603 DDX11L8A8MPP1 907 aa6.62□□□□□ -1.35
ATRX-202ENST00000395603 PDCL2Q8N4E4 241 aa6.62□□□□□ -1.35
ATRX-202ENST00000395603 CARMIL1Q5VZK9 1371 aa6.62□□□□□ -1.35
ATRX-202ENST00000395603 NUP160Q12769 1436 aa6.62□□□□□ -1.35
ATRX-202ENST00000395603 CAMSAP2Q08AD1 1489 aa6.62□□□□□ -1.35
ATRX-202ENST00000395603 HMMRO75330 724 aa6.62□□□□□ -1.35
ATRX-202ENST00000395603 UBE2Q2Q8WVN8 375 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms