RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 ERCC6Q03468 1493 aa15.17■□□□□ 0.02
HIF1A-203ENST00000394997 CAMSAP2Q08AD1 1489 aa15.16■□□□□ 0.02
HIF1A-203ENST00000394997 TEX14Q8IWB6 1497 aa15.16■□□□□ 0.02
HIF1A-203ENST00000394997 MBD5Q9P267 1494 aa15.16■□□□□ 0.02
HIF1A-203ENST00000394997 KDM5DQ9BY66 1539 aa15.16■□□□□ 0.02
HIF1A-203ENST00000394997 PZPP20742 1482 aa15.15■□□□□ 0.02
HIF1A-203ENST00000394997 SAMD9LQ8IVG5 1584 aa15.15■□□□□ 0.02
HIF1A-203ENST00000394997 ATP10BO94823 1461 aa15.15■□□□□ 0.02
HIF1A-203ENST00000394997 TROQ12816 1431 aaPredicted RBP15.15■□□□□ 0.02
HIF1A-203ENST00000394997 PRG4Q92954 1404 aaPredicted RBP15.15■□□□□ 0.02
HIF1A-203ENST00000394997 ARHGEF5Q12774 1597 aa15.14■□□□□ 0.01
HIF1A-203ENST00000394997 ACIN1Q9UKV3 1341 aaKnown RBP15.14■□□□□ 0.01
HIF1A-203ENST00000394997 TTC37Q6PGP7 1564 aa15.12■□□□□ 0.01
HIF1A-203ENST00000394997 SIN3AQ96ST3 1273 aa15.11■□□□□ 0.01
HIF1A-203ENST00000394997 SHANK2Q9UPX8 1470 aa15.1■□□□□ 0.01
HIF1A-203ENST00000394997 MAST1Q9Y2H9 1570 aa15.1■□□□□ 0.01
HIF1A-203ENST00000394997 TIMELESSQ9UNS1 1208 aa15.07■□□□□ 0
HIF1A-203ENST00000394997 UNC13BO14795 1591 aa15.05■□□□□ 0
HIF1A-203ENST00000394997 NCOA1Q15788 1441 aa15.05■□□□□ -0
HIF1A-203ENST00000394997 PPP1R15AO75807 674 aaPredicted RBP15.05■□□□□ -0
HIF1A-203ENST00000394997 ZCCHC11Q5TAX3 1644 aaKnown RBP15.05■□□□□ -0
HIF1A-203ENST00000394997 RPRD2Q5VT52 1461 aaKnown RBP15.05■□□□□ -0
HIF1A-203ENST00000394997 PTPRGP23470 1445 aa15.04■□□□□ -0
HIF1A-203ENST00000394997 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.04■□□□□ -0
HIF1A-203ENST00000394997 FAM50AQ14320 339 aaKnown RBP15.04■□□□□ -0
HIF1A-203ENST00000394997 ITGAEP38570 1179 aa15.03■□□□□ -0
HIF1A-203ENST00000394997 BCORL1Q5H9F3 1711 aa15.03■□□□□ -0
HIF1A-203ENST00000394997 MYO5CQ9NQX4 1742 aa15.03■□□□□ -0
HIF1A-203ENST00000394997 ANKRD30BQ9BXX2 1392 aa15.03■□□□□ -0
HIF1A-203ENST00000394997 ZNF644Q9H582 1327 aaPredicted RBP15.02■□□□□ -0
HIF1A-203ENST00000394997 PLXNC1O60486 1568 aa15.02■□□□□ -0
HIF1A-203ENST00000394997 SPATA31E1Q6ZUB1 1445 aa15.02■□□□□ -0
HIF1A-203ENST00000394997 ABCC2Q92887 1545 aa15□□□□□ -0.01
HIF1A-203ENST00000394997 MAGI2Q86UL8 1455 aa14.99□□□□□ -0.01
HIF1A-203ENST00000394997 E9PCH4 1651 aa14.99□□□□□ -0.01
HIF1A-203ENST00000394997 KDM5CP41229 1560 aa14.97□□□□□ -0.01
HIF1A-203ENST00000394997 UHRF1BP1LA0JNW5 1464 aa14.96□□□□□ -0.01
HIF1A-203ENST00000394997 ARHGEF12Q9NZN5 1544 aa14.96□□□□□ -0.02
HIF1A-203ENST00000394997 JPH4Q96JJ6 628 aa14.96□□□□□ -0.02
HIF1A-203ENST00000394997 IQGAP3Q86VI3 1631 aa14.95□□□□□ -0.02
HIF1A-203ENST00000394997 DEPDC5O75140 1603 aa14.95□□□□□ -0.02
HIF1A-203ENST00000394997 CARMIL2Q6F5E8 1435 aa14.93□□□□□ -0.02
HIF1A-203ENST00000394997 ABCA9Q8IUA7 1624 aa14.92□□□□□ -0.02
HIF1A-203ENST00000394997 TRPM1Q7Z4N2 1603 aa14.89□□□□□ -0.03
HIF1A-203ENST00000394997 KCNH8Q96L42 1107 aa14.89□□□□□ -0.03
HIF1A-203ENST00000394997 ATP1B4Q9UN42 357 aaPredicted RBP14.89□□□□□ -0.03
HIF1A-203ENST00000394997 ABCC1P33527 1531 aa14.88□□□□□ -0.03
HIF1A-203ENST00000394997 SYCP2Q9BX26 1530 aa14.88□□□□□ -0.03
HIF1A-203ENST00000394997 ARAP3Q8WWN8 1544 aa14.87□□□□□ -0.03
HIF1A-203ENST00000394997 LAMC1P11047 1609 aa14.87□□□□□ -0.03
HIF1A-203ENST00000394997 UHRF1BP1Q6BDS2 1440 aa14.87□□□□□ -0.03
HIF1A-203ENST00000394997 RNF17Q9BXT8 1623 aaKnown RBP14.86□□□□□ -0.03
HIF1A-203ENST00000394997 RRP7BPQ9NSQ0 103 aa14.86□□□□□ -0.03
HIF1A-203ENST00000394997 CHMP7Q8WUX9 453 aaPredicted RBP14.85□□□□□ -0.03
HIF1A-203ENST00000394997 MPHOSPH9Q99550 1183 aa14.85□□□□□ -0.03
HIF1A-203ENST00000394997 MROH1Q8NDA8 1641 aa14.85□□□□□ -0.03
HIF1A-203ENST00000394997 INO80Q9ULG1 1556 aaPredicted RBP14.85□□□□□ -0.03
HIF1A-203ENST00000394997 PLA2R1Q13018 1463 aa14.85□□□□□ -0.03
HIF1A-203ENST00000394997 VWDEQ8N2E2 1590 aa14.85□□□□□ -0.03
HIF1A-203ENST00000394997 C9orf84Q5VXU9 1444 aa14.85□□□□□ -0.03
HIF1A-203ENST00000394997 KIAA1107Q9UPP5 1409 aa14.83□□□□□ -0.04
HIF1A-203ENST00000394997 FAM135AQ9P2D6 1515 aa14.82□□□□□ -0.04
HIF1A-203ENST00000394997 CCDC141Q6ZP82 1450 aa14.81□□□□□ -0.04
HIF1A-203ENST00000394997 IFT172Q9UG01 1749 aa14.81□□□□□ -0.04
HIF1A-203ENST00000394997 NBPF8Q3BBV2 869 aa14.81□□□□□ -0.04
HIF1A-203ENST00000394997 CEP152O94986 1710 aa14.8□□□□□ -0.04
HIF1A-203ENST00000394997 ZFYVE16Q7Z3T8 1539 aa14.8□□□□□ -0.04
HIF1A-203ENST00000394997 ATP10AO60312 1499 aa14.8□□□□□ -0.04
HIF1A-203ENST00000394997 CHIC2Q9UKJ5 165 aa14.79□□□□□ -0.04
HIF1A-203ENST00000394997 C11orf95C9JLR9 678 aaPredicted RBP14.79□□□□□ -0.04
HIF1A-203ENST00000394997 WASHC2AQ641Q2 1341 aa14.79□□□□□ -0.04
HIF1A-203ENST00000394997 ARID3CA6NKF2 412 aa14.78□□□□□ -0.04
HIF1A-203ENST00000394997 ANKRD50Q9ULJ7 1429 aa14.78□□□□□ -0.04
HIF1A-203ENST00000394997 RALGAPBQ86X10 1494 aa14.77□□□□□ -0.05
HIF1A-203ENST00000394997 FOXD1Q16676 465 aa14.76□□□□□ -0.05
HIF1A-203ENST00000394997 SPHKAPQ2M3C7 1700 aa14.75□□□□□ -0.05
HIF1A-203ENST00000394997 TONSLQ96HA7 1378 aa14.74□□□□□ -0.05
HIF1A-203ENST00000394997 IQGAP1P46940 1657 aa14.74□□□□□ -0.05
HIF1A-203ENST00000394997 NEURL4Q96JN8 1562 aa14.73□□□□□ -0.05
HIF1A-203ENST00000394997 L3MBTL2Q969R5 705 aa14.73□□□□□ -0.05
HIF1A-203ENST00000394997 KIDINS220Q9ULH0 1771 aa14.73□□□□□ -0.05
HIF1A-203ENST00000394997 EIF2AK4Q9P2K8 1649 aaKnown RBP14.73□□□□□ -0.05
HIF1A-203ENST00000394997 PLCH2O75038 1416 aa14.72□□□□□ -0.05
HIF1A-203ENST00000394997 PRDM15P57071 1507 aaPredicted RBP14.71□□□□□ -0.05
HIF1A-203ENST00000394997 DUOX2Q9NRD8 1548 aa14.71□□□□□ -0.06
HIF1A-203ENST00000394997 HIRIP3Q9BW71 556 aaPredicted RBP14.71□□□□□ -0.06
HIF1A-203ENST00000394997 DHX29Q7Z478 1369 aaKnown RBP14.71□□□□□ -0.06
HIF1A-203ENST00000394997 MADDQ8WXG6 1647 aa14.7□□□□□ -0.06
HIF1A-203ENST00000394997 CNTLNQ9NXG0 1405 aa14.7□□□□□ -0.06
HIF1A-203ENST00000394997 ANKRD30AQ9BXX3 1397 aa14.69□□□□□ -0.06
HIF1A-203ENST00000394997 CFDP1Q9UEE9 299 aaPredicted RBP14.68□□□□□ -0.06
HIF1A-203ENST00000394997 ARHGAP5Q13017 1502 aa14.68□□□□□ -0.06
HIF1A-203ENST00000394997 MYOM1P52179 1685 aa14.68□□□□□ -0.06
HIF1A-203ENST00000394997 TET3O43151 1660 aa14.68□□□□□ -0.06
HIF1A-203ENST00000394997 ERBINQ96RT1 1412 aa14.67□□□□□ -0.06
HIF1A-203ENST00000394997 MROH2AA6NES4 1674 aa14.67□□□□□ -0.06
HIF1A-203ENST00000394997 FRMPD1Q5SYB0 1578 aa14.67□□□□□ -0.06
HIF1A-203ENST00000394997 CLTCL1P53675 1640 aa14.67□□□□□ -0.06
HIF1A-203ENST00000394997 KIF15Q9NS87 1388 aa14.66□□□□□ -0.06
HIF1A-203ENST00000394997 A2MP01023 1474 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms