RNA–Protein interactions for RNA: ENST00000394828.6

PPP3CB-203, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-203ENST00000394828 CDC42BPAQ5VT25 1732 aa17.12■□□□□ 0.33
PPP3CB-203ENST00000394828 ABCC10Q5T3U5 1492 aa17.1■□□□□ 0.33
PPP3CB-203ENST00000394828 GPATCH8Q9UKJ3 1502 aaKnown RBP17.1■□□□□ 0.33
PPP3CB-203ENST00000394828 ZCCHC11Q5TAX3 1644 aaKnown RBP17.08■□□□□ 0.32
PPP3CB-203ENST00000394828 UHRF1BP1LA0JNW5 1464 aa17.08■□□□□ 0.32
PPP3CB-203ENST00000394828 DNMT1P26358 1616 aaKnown RBP17.07■□□□□ 0.32
PPP3CB-203ENST00000394828 PLEKHD1A6NEE1 506 aa17.07■□□□□ 0.32
PPP3CB-203ENST00000394828 HFM1A2PYH4 1435 aa17.07■□□□□ 0.32
PPP3CB-203ENST00000394828 GCC2Q8IWJ2 1684 aa17.06■□□□□ 0.32
PPP3CB-203ENST00000394828 ZNF644Q9H582 1327 aaPredicted RBP17.05■□□□□ 0.32
PPP3CB-203ENST00000394828 CAMSAP2Q08AD1 1489 aa17.05■□□□□ 0.32
PPP3CB-203ENST00000394828 NAIPQ13075 1403 aa17.04■□□□□ 0.32
PPP3CB-203ENST00000394828 MAPKBP1O60336 1514 aa17.04■□□□□ 0.32
PPP3CB-203ENST00000394828 KDM5BQ9UGL1 1544 aa17.03■□□□□ 0.32
PPP3CB-203ENST00000394828 DAPK1P53355 1430 aa17.03■□□□□ 0.32
PPP3CB-203ENST00000394828 OSCARQ8IYS5 282 aa17.03■□□□□ 0.32
PPP3CB-203ENST00000394828 CLSPNQ9HAW4 1339 aa17.02■□□□□ 0.32
PPP3CB-203ENST00000394828 CDC42BPBQ9Y5S2 1711 aa17.02■□□□□ 0.31
PPP3CB-203ENST00000394828 CROCC2H7BZ55 1655 aa17.02■□□□□ 0.31
PPP3CB-203ENST00000394828 TTC37Q6PGP7 1564 aa17.01■□□□□ 0.31
PPP3CB-203ENST00000394828 ABCC5O15440 1437 aa17.01■□□□□ 0.31
PPP3CB-203ENST00000394828 PREX2Q70Z35 1606 aa17■□□□□ 0.31
PPP3CB-203ENST00000394828 KDM6BO15054 1643 aa17■□□□□ 0.31
PPP3CB-203ENST00000394828 AKNAQ7Z591 1439 aa16.99■□□□□ 0.31
PPP3CB-203ENST00000394828 CFDP1Q9UEE9 299 aaPredicted RBP16.99■□□□□ 0.31
PPP3CB-203ENST00000394828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.99■□□□□ 0.31
PPP3CB-203ENST00000394828 CHIC2Q9UKJ5 165 aa16.98■□□□□ 0.31
PPP3CB-203ENST00000394828 ANO8Q9HCE9 1232 aaPredicted RBP16.96■□□□□ 0.31
PPP3CB-203ENST00000394828 ADGBQ8N7X0 1667 aa16.96■□□□□ 0.31
PPP3CB-203ENST00000394828 RRP7BPQ9NSQ0 103 aa16.95■□□□□ 0.3
PPP3CB-203ENST00000394828 RBM19Q9Y4C8 960 aaKnown RBP16.95■□□□□ 0.3
PPP3CB-203ENST00000394828 MYO5CQ9NQX4 1742 aa16.95■□□□□ 0.3
PPP3CB-203ENST00000394828 MSH5O43196 834 aa16.94■□□□□ 0.3
PPP3CB-203ENST00000394828 SAMD9LQ8IVG5 1584 aa16.94■□□□□ 0.3
PPP3CB-203ENST00000394828 ROCK1Q13464 1354 aa16.94■□□□□ 0.3
PPP3CB-203ENST00000394828 ZNF777Q9ULD5 760 aaPredicted RBP16.93■□□□□ 0.3
PPP3CB-203ENST00000394828 KCNH8Q96L42 1107 aa16.91■□□□□ 0.3
PPP3CB-203ENST00000394828 ARHGEF5Q12774 1597 aa16.89■□□□□ 0.29
PPP3CB-203ENST00000394828 ADGRL2O95490 1459 aa16.89■□□□□ 0.29
PPP3CB-203ENST00000394828 MBD5Q9P267 1494 aa16.88■□□□□ 0.29
PPP3CB-203ENST00000394828 ARHGAP5Q13017 1502 aa16.87■□□□□ 0.29
PPP3CB-203ENST00000394828 FKBP8Q14318 412 aa16.87■□□□□ 0.29
PPP3CB-203ENST00000394828 SHANK2Q9UPX8 1470 aa16.87■□□□□ 0.29
PPP3CB-203ENST00000394828 NCOA1Q15788 1441 aa16.86■□□□□ 0.29
PPP3CB-203ENST00000394828 DENND4BO75064 1496 aaPredicted RBP16.86■□□□□ 0.29
PPP3CB-203ENST00000394828 WDR7Q9Y4E6 1490 aa16.86■□□□□ 0.29
PPP3CB-203ENST00000394828 SYCP2Q9BX26 1530 aa16.84■□□□□ 0.29
PPP3CB-203ENST00000394828 PLCH2O75038 1416 aa16.83■□□□□ 0.28
PPP3CB-203ENST00000394828 C9orf84Q5VXU9 1444 aa16.83■□□□□ 0.28
PPP3CB-203ENST00000394828 HNRNPMP52272 730 aaKnown RBP eCLIP16.82■□□□□ 0.28
PPP3CB-203ENST00000394828 ABCA9Q8IUA7 1624 aa16.81■□□□□ 0.28
PPP3CB-203ENST00000394828 CCDC141Q6ZP82 1450 aa16.81■□□□□ 0.28
PPP3CB-203ENST00000394828 ASXL2Q76L83 1435 aa16.81■□□□□ 0.28
PPP3CB-203ENST00000394828 SIN3AQ96ST3 1273 aa16.81■□□□□ 0.28
PPP3CB-203ENST00000394828 ARHGEF12Q9NZN5 1544 aa16.8■□□□□ 0.28
PPP3CB-203ENST00000394828 ANKRD30AQ9BXX3 1397 aa16.79■□□□□ 0.28
PPP3CB-203ENST00000394828 ARAP3Q8WWN8 1544 aa16.78■□□□□ 0.28
PPP3CB-203ENST00000394828 MAST1Q9Y2H9 1570 aa16.78■□□□□ 0.28
PPP3CB-203ENST00000394828 CCDC136Q96JN2 1154 aa16.78■□□□□ 0.28
PPP3CB-203ENST00000394828 ABCC1P33527 1531 aa16.78■□□□□ 0.28
PPP3CB-203ENST00000394828 KIAA1107Q9UPP5 1409 aa16.77■□□□□ 0.28
PPP3CB-203ENST00000394828 RIMBP3CA6NJZ7 1639 aa16.76■□□□□ 0.27
PPP3CB-203ENST00000394828 RIMBP3BA6NNM3 1639 aa16.76■□□□□ 0.27
PPP3CB-203ENST00000394828 RIMBP3Q9UFD9 1639 aa16.76■□□□□ 0.27
PPP3CB-203ENST00000394828 ERICH6Q7L0X2 663 aa16.76■□□□□ 0.27
PPP3CB-203ENST00000394828 PLEKHH2Q8IVE3 1493 aa16.76■□□□□ 0.27
PPP3CB-203ENST00000394828 TRIM52Q96A61 297 aa16.75■□□□□ 0.27
PPP3CB-203ENST00000394828 PZPP20742 1482 aa16.73■□□□□ 0.27
PPP3CB-203ENST00000394828 ANKRD50Q9ULJ7 1429 aa16.73■□□□□ 0.27
PPP3CB-203ENST00000394828 MPHOSPH9Q99550 1183 aa16.73■□□□□ 0.27
PPP3CB-203ENST00000394828 TSPY4P0CV99 314 aa16.72■□□□□ 0.27
PPP3CB-203ENST00000394828 TSPY10P0CW01 314 aa16.72■□□□□ 0.27
PPP3CB-203ENST00000394828 SALL2Q9Y467 1007 aaPredicted RBP16.72■□□□□ 0.27
PPP3CB-203ENST00000394828 PLXNC1O60486 1568 aa16.72■□□□□ 0.27
PPP3CB-203ENST00000394828 RSPH4AQ5TD94 716 aa16.72■□□□□ 0.27
PPP3CB-203ENST00000394828 KIF15Q9NS87 1388 aa16.71■□□□□ 0.27
PPP3CB-203ENST00000394828 EFCAB2Q5VUJ9 269 aa16.71■□□□□ 0.27
PPP3CB-203ENST00000394828 DEKP35659 375 aaKnown RBP16.69■□□□□ 0.26
PPP3CB-203ENST00000394828 TRAPPC8Q9Y2L5 1435 aa16.69■□□□□ 0.26
PPP3CB-203ENST00000394828 FANCAO15360 1455 aa16.69■□□□□ 0.26
PPP3CB-203ENST00000394828 NPM1P06748 294 aaKnown RBP eCLIP16.67■□□□□ 0.26
PPP3CB-203ENST00000394828 KDM5DQ9BY66 1539 aa16.67■□□□□ 0.26
PPP3CB-203ENST00000394828 FOXD1Q16676 465 aa16.67■□□□□ 0.26
PPP3CB-203ENST00000394828 TIMELESSQ9UNS1 1208 aa16.66■□□□□ 0.26
PPP3CB-203ENST00000394828 ANKRD30BQ9BXX2 1392 aa16.64■□□□□ 0.25
PPP3CB-203ENST00000394828 ZFYVE16Q7Z3T8 1539 aa16.64■□□□□ 0.25
PPP3CB-203ENST00000394828 SLC4A1APQ9BWU0 796 aaKnown RBP16.63■□□□□ 0.25
PPP3CB-203ENST00000394828 UNC13BO14795 1591 aa16.63■□□□□ 0.25
PPP3CB-203ENST00000394828 CYB5RLQ6IPT4 315 aa16.62■□□□□ 0.25
PPP3CB-203ENST00000394828 INO80Q9ULG1 1556 aaPredicted RBP16.62■□□□□ 0.25
PPP3CB-203ENST00000394828 DUOX2Q9NRD8 1548 aa16.62■□□□□ 0.25
PPP3CB-203ENST00000394828 ADGRL1O94910 1474 aa16.61■□□□□ 0.25
PPP3CB-203ENST00000394828 TONSLQ96HA7 1378 aa16.61■□□□□ 0.25
PPP3CB-203ENST00000394828 PPP1R15AO75807 674 aaPredicted RBP16.6■□□□□ 0.25
PPP3CB-203ENST00000394828 CFAP74Q9C0B2 1584 aa16.59■□□□□ 0.25
PPP3CB-203ENST00000394828 NUP155O75694 1391 aa16.59■□□□□ 0.25
PPP3CB-203ENST00000394828 AFAP1Q8N556 730 aa16.59■□□□□ 0.25
PPP3CB-203ENST00000394828 CD109Q6YHK3 1445 aa16.59■□□□□ 0.25
PPP3CB-203ENST00000394828 RTEL1-TNFRSF6BF6WH68 1400 aa16.58■□□□□ 0.25
PPP3CB-203ENST00000394828 RPRD2Q5VT52 1461 aaKnown RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms