RNA–Protein interactions for RNA: ENST00000394800.6

MATR3-230, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-230ENST00000394800 UGGT2Q9NYU1 1516 aa8.16□□□□□ -1.1
MATR3-230ENST00000394800 MAPKBP1O60336 1514 aa8.16□□□□□ -1.1
MATR3-230ENST00000394800 CHMP7Q8WUX9 453 aaPredicted RBP8.15□□□□□ -1.1
MATR3-230ENST00000394800 CCDC9Q9Y3X0 531 aaKnown RBP8.15□□□□□ -1.1
MATR3-230ENST00000394800 EPRSP07814 1512 aaKnown RBP8.15□□□□□ -1.1
MATR3-230ENST00000394800 USP35Q9P2H5 1018 aa8.15□□□□□ -1.11
MATR3-230ENST00000394800 CEP170Q5SW79 1584 aa8.14□□□□□ -1.11
MATR3-230ENST00000394800 ZBTB7CA1YPR0 619 aa8.14□□□□□ -1.11
MATR3-230ENST00000394800 PTMSP20962 102 aa8.14□□□□□ -1.11
MATR3-230ENST00000394800 NAP1L5Q96NT1 182 aaPredicted RBP8.13□□□□□ -1.11
MATR3-230ENST00000394800 SIN3AQ96ST3 1273 aa8.13□□□□□ -1.11
MATR3-230ENST00000394800 MYOM3Q5VTT5 1437 aa8.13□□□□□ -1.11
MATR3-230ENST00000394800 KIAA0556O60303 1618 aa8.13□□□□□ -1.11
MATR3-230ENST00000394800 MAGI1Q96QZ7 1491 aaPredicted RBP8.13□□□□□ -1.11
MATR3-230ENST00000394800 FBXO3Q9UK99 471 aa8.13□□□□□ -1.11
MATR3-230ENST00000394800 SYNJ2O15056 1496 aa8.12□□□□□ -1.11
MATR3-230ENST00000394800 SUPT6HQ7KZ85 1726 aaKnown RBP8.12□□□□□ -1.11
MATR3-230ENST00000394800 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.12□□□□□ -1.115e-19■■□□□ 13.5
MATR3-230ENST00000394800 ARHGEF11O15085 1522 aa8.12□□□□□ -1.11
MATR3-230ENST00000394800 NUP153P49790 1475 aaKnown RBP8.11□□□□□ -1.11
MATR3-230ENST00000394800 DHX37Q8IY37 1157 aaKnown RBP8.11□□□□□ -1.11
MATR3-230ENST00000394800 JPH4Q96JJ6 628 aa8.11□□□□□ -1.11
MATR3-230ENST00000394800 EHBP1L1Q8N3D4 1523 aa8.11□□□□□ -1.11
MATR3-230ENST00000394800 HECW1Q76N89 1606 aa8.11□□□□□ -1.11
MATR3-230ENST00000394800 PLB1Q6P1J6 1458 aa8.11□□□□□ -1.11
MATR3-230ENST00000394800 CHIC2Q9UKJ5 165 aa8.1□□□□□ -1.11
MATR3-230ENST00000394800 CCDC18Q5T9S5 1454 aa8.1□□□□□ -1.11
MATR3-230ENST00000394800 PTPN23Q9H3S7 1636 aa8.1□□□□□ -1.11
MATR3-230ENST00000394800 NUP160Q12769 1436 aa8.09□□□□□ -1.11
MATR3-230ENST00000394800 NAIPQ13075 1403 aa8.09□□□□□ -1.11
MATR3-230ENST00000394800 CHMP4AQ9BY43 222 aa8.09□□□□□ -1.11
MATR3-230ENST00000394800 NEUROD1Q13562 356 aa8.09□□□□□ -1.11
MATR3-230ENST00000394800 MIER1Q8N108 512 aa8.09□□□□□ -1.11
MATR3-230ENST00000394800 ZNF644Q9H582 1327 aaPredicted RBP8.09□□□□□ -1.11
MATR3-230ENST00000394800 HSP90B1P14625 803 aaKnown RBP8.08□□□□□ -1.12
MATR3-230ENST00000394800 TAF7LQ5H9L4 462 aa8.08□□□□□ -1.12
MATR3-230ENST00000394800 RRP7BPQ9NSQ0 103 aa8.08□□□□□ -1.12
MATR3-230ENST00000394800 HFM1A2PYH4 1435 aa8.08□□□□□ -1.12
MATR3-230ENST00000394800 RAPGEF6Q8TEU7 1601 aa8.07□□□□□ -1.12
MATR3-230ENST00000394800 PRG4Q92954 1404 aaPredicted RBP8.07□□□□□ -1.12
MATR3-230ENST00000394800 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.07□□□□□ -1.12
MATR3-230ENST00000394800 KDM6BO15054 1643 aa8.06□□□□□ -1.12
MATR3-230ENST00000394800 BRD2P25440 801 aaKnown RBP8.05□□□□□ -1.12
MATR3-230ENST00000394800 TCOF1Q13428 1488 aaKnown RBP8.04□□□□□ -1.12
MATR3-230ENST00000394800 DENND4BO75064 1496 aaPredicted RBP8.04□□□□□ -1.12
MATR3-230ENST00000394800 SCAF1Q9H7N4 1312 aaKnown RBP8.04□□□□□ -1.12
MATR3-230ENST00000394800 TMEM132AQ24JP5 1023 aa8.03□□□□□ -1.12
MATR3-230ENST00000394800 KIF14Q15058 1648 aa8.03□□□□□ -1.12
MATR3-230ENST00000394800 UACAQ9BZF9 1416 aa8.03□□□□□ -1.12
MATR3-230ENST00000394800 PPM1GO15355 546 aaPredicted RBP8.03□□□□□ -1.12
MATR3-230ENST00000394800 MIA2Q96PC5 1412 aa8.03□□□□□ -1.12
MATR3-230ENST00000394800 PAXIP1Q6ZW49 1069 aaPredicted RBP8.02□□□□□ -1.12
MATR3-230ENST00000394800 HIRIP3Q9BW71 556 aaPredicted RBP8.02□□□□□ -1.12
MATR3-230ENST00000394800 CARMIL2Q6F5E8 1435 aa8.02□□□□□ -1.12
MATR3-230ENST00000394800 CHD1O14646 1710 aa8.02□□□□□ -1.13
MATR3-230ENST00000394800 TROQ12816 1431 aaPredicted RBP8.02□□□□□ -1.13
MATR3-230ENST00000394800 UBE2Q2Q8WVN8 375 aa8.02□□□□□ -1.13
MATR3-230ENST00000394800 ATP10BO94823 1461 aa8.01□□□□□ -1.13
MATR3-230ENST00000394800 FOXD1Q16676 465 aa8.01□□□□□ -1.13
MATR3-230ENST00000394800 ABCC5O15440 1437 aa8□□□□□ -1.13
MATR3-230ENST00000394800 PPP1R15AO75807 674 aaPredicted RBP8□□□□□ -1.13
MATR3-230ENST00000394800 ERCC6L2Q5T890 1561 aa8□□□□□ -1.13
MATR3-230ENST00000394800 ABCA8O94911 1581 aa8□□□□□ -1.13
MATR3-230ENST00000394800 GPATCH8Q9UKJ3 1502 aaKnown RBP8□□□□□ -1.13
MATR3-230ENST00000394800 IRX6P78412 446 aaPredicted RBP8□□□□□ -1.13
MATR3-230ENST00000394800 DAPK1P53355 1430 aa7.99□□□□□ -1.13
MATR3-230ENST00000394800 ACIN1Q9UKV3 1341 aaKnown RBP7.99□□□□□ -1.13
MATR3-230ENST00000394800 ZNF777Q9ULD5 760 aaPredicted RBP7.99□□□□□ -1.13
MATR3-230ENST00000394800 GCC2Q8IWJ2 1684 aa7.99□□□□□ -1.13
MATR3-230ENST00000394800 CFDP1Q9UEE9 299 aaPredicted RBP7.99□□□□□ -1.13
MATR3-230ENST00000394800 TRIM52Q96A61 297 aa7.98□□□□□ -1.13
MATR3-230ENST00000394800 PTPRGP23470 1445 aa7.97□□□□□ -1.13
MATR3-230ENST00000394800 DNMT1P26358 1616 aaKnown RBP7.97□□□□□ -1.13
MATR3-230ENST00000394800 KDM5BQ9UGL1 1544 aa7.97□□□□□ -1.13
MATR3-230ENST00000394800 AKNAQ7Z591 1439 aa7.97□□□□□ -1.13
MATR3-230ENST00000394800 CDC42BPAQ5VT25 1732 aa7.97□□□□□ -1.13
MATR3-230ENST00000394800 CAMSAP2Q08AD1 1489 aa7.96□□□□□ -1.13
MATR3-230ENST00000394800 PLEKHD1A6NEE1 506 aa7.96□□□□□ -1.13
MATR3-230ENST00000394800 MPHOSPH9Q99550 1183 aa7.96□□□□□ -1.13
MATR3-230ENST00000394800 RBM25P49756 843 aaKnown RBP7.96□□□□□ -1.14
MATR3-230ENST00000394800 TONSLQ96HA7 1378 aa7.95□□□□□ -1.14
MATR3-230ENST00000394800 ADCY10Q96PN6 1610 aa7.95□□□□□ -1.14
MATR3-230ENST00000394800 ABCC10Q5T3U5 1492 aa7.95□□□□□ -1.14
MATR3-230ENST00000394800 NCOA1Q15788 1441 aa7.95□□□□□ -1.14
MATR3-230ENST00000394800 KCNH8Q96L42 1107 aa7.95□□□□□ -1.14
MATR3-230ENST00000394800 PHF23Q9BUL5 403 aaPredicted RBP7.95□□□□□ -1.14
MATR3-230ENST00000394800 DDX10Q13206 875 aaKnown RBP7.94□□□□□ -1.14
MATR3-230ENST00000394800 ROCK1Q13464 1354 aa7.94□□□□□ -1.14
MATR3-230ENST00000394800 AEBP1Q8IUX7 1158 aa7.93□□□□□ -1.14
MATR3-230ENST00000394800 BCL11BQ9C0K0 894 aaPredicted RBP7.93□□□□□ -1.14
MATR3-230ENST00000394800 SHROOM2Q13796 1616 aa7.93□□□□□ -1.14
MATR3-230ENST00000394800 ITSN2Q9NZM3 1697 aa7.93□□□□□ -1.14
MATR3-230ENST00000394800 HNRNPMP52272 730 aaKnown RBP eCLIP7.92□□□□□ -1.144e-9■■■■■ 28.9
MATR3-230ENST00000394800 L3MBTL2Q969R5 705 aa7.91□□□□□ -1.14
MATR3-230ENST00000394800 PSMD1Q99460 953 aa7.91□□□□□ -1.14
MATR3-230ENST00000394800 ANKRD30BQ9BXX2 1392 aa7.91□□□□□ -1.14
MATR3-230ENST00000394800 CDC42BPBQ9Y5S2 1711 aa7.91□□□□□ -1.14
MATR3-230ENST00000394800 PZPP20742 1482 aa7.9□□□□□ -1.14
MATR3-230ENST00000394800 PATL2C9JE40 543 aaKnown RBP7.9□□□□□ -1.14
MATR3-230ENST00000394800 CROCC2H7BZ55 1655 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms