RNA–Protein interactions for RNA: ENST00000394686.3

SGMS2-203, Transcript of sphingomyelin synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS2, Length 2,127 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-203ENST00000394686 RNF39Q9H2S5 420 aa9.67□□□□□ -0.86
SGMS2-203ENST00000394686 HMGXB3Q12766 1538 aa9.67□□□□□ -0.86
SGMS2-203ENST00000394686 AK7Q96M32 723 aa9.66□□□□□ -0.86
SGMS2-203ENST00000394686 PEG3Q9GZU2 1588 aa9.66□□□□□ -0.86
SGMS2-203ENST00000394686 CLUAP1Q96AJ1 413 aa9.65□□□□□ -0.86
SGMS2-203ENST00000394686 ZNF428Q96B54 188 aa9.64□□□□□ -0.87
SGMS2-203ENST00000394686 MFRPQ9BY79 579 aa9.64□□□□□ -0.87
SGMS2-203ENST00000394686 NCAPD3P42695 1498 aa9.64□□□□□ -0.87
SGMS2-203ENST00000394686 IGSF3O75054 1194 aa9.63□□□□□ -0.87
SGMS2-203ENST00000394686 PDE4DQ08499 809 aa9.63□□□□□ -0.87
SGMS2-203ENST00000394686 KCTD17Q8N5Z5 321 aa9.63□□□□□ -0.87
SGMS2-203ENST00000394686 KRI1Q8N9T8 703 aaKnown RBP9.63□□□□□ -0.87
SGMS2-203ENST00000394686 CHRM1P11229 460 aaPredicted RBP9.62□□□□□ -0.87
SGMS2-203ENST00000394686 TRIM66O15016 1216 aa9.62□□□□□ -0.87
SGMS2-203ENST00000394686 ATAD2BQ9ULI0 1458 aa9.61□□□□□ -0.87
SGMS2-203ENST00000394686 MLLT3P42568 568 aaPredicted RBP9.61□□□□□ -0.87
SGMS2-203ENST00000394686 MNX1P50219 401 aaPredicted RBP9.61□□□□□ -0.87
SGMS2-203ENST00000394686 PLEKHG3A1L390 1219 aa9.59□□□□□ -0.87
SGMS2-203ENST00000394686 BAZ1BQ9UIG0 1483 aaKnown RBP9.57□□□□□ -0.88
SGMS2-203ENST00000394686 NCKAP5LQ9HCH0 1330 aa9.57□□□□□ -0.88
SGMS2-203ENST00000394686 RAD21O60216 631 aa9.57□□□□□ -0.88
SGMS2-203ENST00000394686 AEBP1Q8IUX7 1158 aa9.56□□□□□ -0.88
SGMS2-203ENST00000394686 GPIHBP1Q8IV16 184 aa9.56□□□□□ -0.88
SGMS2-203ENST00000394686 SUPT16HQ9Y5B9 1047 aaKnown RBP9.55□□□□□ -0.88
SGMS2-203ENST00000394686 MROH2BQ7Z745 1585 aa9.54□□□□□ -0.88
SGMS2-203ENST00000394686 ONECUT3O60422 494 aaPredicted RBP9.54□□□□□ -0.88
SGMS2-203ENST00000394686 MTMR7Q9Y216 660 aa9.54□□□□□ -0.88
SGMS2-203ENST00000394686 FOXD4L5Q5VV16 416 aaPredicted RBP9.53□□□□□ -0.88
SGMS2-203ENST00000394686 FOXD4L4Q8WXT5 416 aaPredicted RBP9.53□□□□□ -0.88
SGMS2-203ENST00000394686 C1QBPQ07021 282 aaKnown RBP9.53□□□□□ -0.88
SGMS2-203ENST00000394686 DSG3P32926 999 aa9.52□□□□□ -0.89
SGMS2-203ENST00000394686 YTHDC1Q96MU7 727 aaKnown RBP9.52□□□□□ -0.89
SGMS2-203ENST00000394686 CREBZFQ9NS37 354 aa9.52□□□□□ -0.89
SGMS2-203ENST00000394686 TRAK2O60296 914 aa9.52□□□□□ -0.89
SGMS2-203ENST00000394686 SMYD5Q6GMV2 418 aa9.51□□□□□ -0.89
SGMS2-203ENST00000394686 RGS22Q8NE09 1264 aa9.51□□□□□ -0.89
SGMS2-203ENST00000394686 LARP6Q9BRS8 491 aaKnown RBP9.51□□□□□ -0.89
SGMS2-203ENST00000394686 MYT1LQ9UL68 1186 aa9.51□□□□□ -0.89
SGMS2-203ENST00000394686 ZNF777Q9ULD5 760 aaPredicted RBP9.5□□□□□ -0.89
SGMS2-203ENST00000394686 WRNQ14191 1432 aaPredicted RBP eCLIP9.5□□□□□ -0.89
SGMS2-203ENST00000394686 PCDHB8Q9UN66 801 aa9.5□□□□□ -0.89
SGMS2-203ENST00000394686 PCDHB13Q9Y5F0 798 aa9.5□□□□□ -0.89
SGMS2-203ENST00000394686 WIZO95785 1651 aa9.49□□□□□ -0.89
SGMS2-203ENST00000394686 LAMC3Q9Y6N6 1575 aa9.48□□□□□ -0.89
SGMS2-203ENST00000394686 RBM25P49756 843 aaKnown RBP9.44□□□□□ -0.9
SGMS2-203ENST00000394686 FLIIQ13045 1269 aa9.44□□□□□ -0.9
SGMS2-203ENST00000394686 FBXO22Q8NEZ5 403 aa9.44□□□□□ -0.9
SGMS2-203ENST00000394686 POM121Q96HA1 1249 aa9.43□□□□□ -0.9
SGMS2-203ENST00000394686 PHF8Q9UPP1 1060 aa9.43□□□□□ -0.9
SGMS2-203ENST00000394686 TOP2AP11388 1531 aaKnown RBP9.43□□□□□ -0.9
SGMS2-203ENST00000394686 PRDM2Q13029 1718 aa9.42□□□□□ -0.9
SGMS2-203ENST00000394686 PARP9Q8IXQ6 854 aa9.41□□□□□ -0.9
SGMS2-203ENST00000394686 RETREG2Q8NC44 543 aa9.41□□□□□ -0.9
SGMS2-203ENST00000394686 TRAIPQ9BWF2 469 aa9.41□□□□□ -0.9
SGMS2-203ENST00000394686 GZF1Q9H116 711 aaPredicted RBP9.41□□□□□ -0.9
SGMS2-203ENST00000394686 ERCC6Q03468 1493 aa9.41□□□□□ -0.9
SGMS2-203ENST00000394686 RSF1Q96T23 1441 aaPredicted RBP9.41□□□□□ -0.9
SGMS2-203ENST00000394686 A6NJR5 290 aa9.41□□□□□ -0.9
SGMS2-203ENST00000394686 IRF5Q13568 498 aa9.41□□□□□ -0.9
SGMS2-203ENST00000394686 GPR37O15354 613 aa9.4□□□□□ -0.9
SGMS2-203ENST00000394686 PDAP1Q13442 181 aaKnown RBP9.4□□□□□ -0.91
SGMS2-203ENST00000394686 EFCAB3Q8N7B9 438 aa9.4□□□□□ -0.91
SGMS2-203ENST00000394686 MFAP1P55081 439 aaKnown RBP9.38□□□□□ -0.91
SGMS2-203ENST00000394686 CLEC11AQ9Y240 323 aa9.38□□□□□ -0.91
SGMS2-203ENST00000394686 CUX2O14529 1486 aa9.38□□□□□ -0.91
SGMS2-203ENST00000394686 MCM6Q14566 821 aa9.38□□□□□ -0.91
SGMS2-203ENST00000394686 TMCO4Q5TGY1 634 aa9.38□□□□□ -0.91
SGMS2-203ENST00000394686 KIF21AQ7Z4S6 1674 aa9.38□□□□□ -0.91
SGMS2-203ENST00000394686 CCDC102AQ96A19 550 aa9.37□□□□□ -0.91
SGMS2-203ENST00000394686 DDX27Q96GQ7 796 aaKnown RBP9.37□□□□□ -0.91
SGMS2-203ENST00000394686 DDRGK1Q96HY6 314 aa9.37□□□□□ -0.91
SGMS2-203ENST00000394686 PSEN1P49768 467 aa9.36□□□□□ -0.91
SGMS2-203ENST00000394686 TSPYL2Q9H2G4 693 aaPredicted RBP9.36□□□□□ -0.91
SGMS2-203ENST00000394686 PDS5BQ9NTI5 1447 aa9.35□□□□□ -0.91
SGMS2-203ENST00000394686 MFSD10Q14728 455 aa9.35□□□□□ -0.91
SGMS2-203ENST00000394686 ARIH1Q9Y4X5 557 aaPredicted RBP9.35□□□□□ -0.91
SGMS2-203ENST00000394686 ZNF467Q7Z7K2 595 aaPredicted RBP9.34□□□□□ -0.91
SGMS2-203ENST00000394686 CRISPLD2Q9H0B8 497 aa9.34□□□□□ -0.91
SGMS2-203ENST00000394686 THOC2Q8NI27 1593 aaKnown RBP9.34□□□□□ -0.91
SGMS2-203ENST00000394686 NESP48681 1621 aa9.34□□□□□ -0.91
SGMS2-203ENST00000394686 CAMK2BQ13554 666 aa9.33□□□□□ -0.92
SGMS2-203ENST00000394686 PROSER2Q86WR7 435 aaPredicted RBP9.33□□□□□ -0.92
SGMS2-203ENST00000394686 RBM19Q9Y4C8 960 aaKnown RBP9.33□□□□□ -0.92
SGMS2-203ENST00000394686 CADPSQ9ULU8 1353 aa9.32□□□□□ -0.92
SGMS2-203ENST00000394686 FECHP22830 423 aa9.32□□□□□ -0.92
SGMS2-203ENST00000394686 ERICH6BQ5W0A0 696 aa9.32□□□□□ -0.92
SGMS2-203ENST00000394686 CABP2Q9NPB3 220 aa9.32□□□□□ -0.92
SGMS2-203ENST00000394686 FANCIQ9NVI1 1328 aa9.32□□□□□ -0.92
SGMS2-203ENST00000394686 PRR29P0C7W0 189 aa9.32□□□□□ -0.92
SGMS2-203ENST00000394686 FNBP4Q8N3X1 1017 aaPredicted RBP9.32□□□□□ -0.92
SGMS2-203ENST00000394686 DPYSL4O14531 572 aa9.31□□□□□ -0.92
SGMS2-203ENST00000394686 PDE4AP27815 886 aa9.31□□□□□ -0.92
SGMS2-203ENST00000394686 MS4A1P11836 297 aa9.29□□□□□ -0.92
SGMS2-203ENST00000394686 MS4A4AQ96JQ5 239 aa9.29□□□□□ -0.92
SGMS2-203ENST00000394686 CFTRP13569 1480 aa9.29□□□□□ -0.92
SGMS2-203ENST00000394686 CCDC97Q96F63 343 aaPredicted RBP9.29□□□□□ -0.92
SGMS2-203ENST00000394686 NLRP6P59044 892 aa9.28□□□□□ -0.92
SGMS2-203ENST00000394686 CEP164Q9UPV0 1460 aa9.27□□□□□ -0.92
SGMS2-203ENST00000394686 IRF6O14896 467 aa9.27□□□□□ -0.93
SGMS2-203ENST00000394686 TTLL12Q14166 644 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms