RNA–Protein interactions for RNA: ENST00000394089.6

RARA-204, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RARA, Length 2,024 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-204ENST00000394089 AKNAQ7Z591 1439 aa33.95■■■■□ 3.02
RARA-204ENST00000394089 DNMT1P26358 1616 aaKnown RBP33.93■■■■□ 3.02
RARA-204ENST00000394089 NAIPQ13075 1403 aa33.93■■■■□ 3.02
RARA-204ENST00000394089 CDC42BPAQ5VT25 1732 aa33.93■■■■□ 3.02
RARA-204ENST00000394089 CAMSAP2Q08AD1 1489 aa33.92■■■■□ 3.02
RARA-204ENST00000394089 DAPK1P53355 1430 aa33.91■■■■□ 3.02
RARA-204ENST00000394089 ZCCHC11Q5TAX3 1644 aaKnown RBP33.91■■■■□ 3.02
RARA-204ENST00000394089 ZNF644Q9H582 1327 aaPredicted RBP33.9■■■■□ 3.02
RARA-204ENST00000394089 ABCC5O15440 1437 aa33.88■■■■□ 3.01
RARA-204ENST00000394089 GCC2Q8IWJ2 1684 aa33.85■■■■□ 3.01
RARA-204ENST00000394089 ROCK1Q13464 1354 aa33.84■■■■□ 3.01
RARA-204ENST00000394089 CHIC2Q9UKJ5 165 aa33.8■■■■□ 3
RARA-204ENST00000394089 MAPKBP1O60336 1514 aa33.79■■■■□ 3
RARA-204ENST00000394089 PREX2Q70Z35 1606 aa33.78■■■■□ 3
RARA-204ENST00000394089 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.78■■■■□ 3
RARA-204ENST00000394089 RRP7BPQ9NSQ0 103 aa33.76■■■■□ 3
RARA-204ENST00000394089 ZNF777Q9ULD5 760 aaPredicted RBP33.76■■■■□ 3
RARA-204ENST00000394089 TTC37Q6PGP7 1564 aa33.74■■■□□ 2.99
RARA-204ENST00000394089 CDC42BPBQ9Y5S2 1711 aa33.73■■■□□ 2.99
RARA-204ENST00000394089 CROCC2H7BZ55 1655 aa33.72■■■□□ 2.99
RARA-204ENST00000394089 ADGRL2O95490 1459 aa33.67■■■□□ 2.98
RARA-204ENST00000394089 ADGBQ8N7X0 1667 aa33.67■■■□□ 2.98
RARA-204ENST00000394089 MYO5CQ9NQX4 1742 aa33.66■■■□□ 2.98
RARA-204ENST00000394089 ARHGEF5Q12774 1597 aa33.66■■■□□ 2.98
RARA-204ENST00000394089 SHANK2Q9UPX8 1470 aa33.65■■■□□ 2.98
RARA-204ENST00000394089 SAMD9LQ8IVG5 1584 aa33.65■■■□□ 2.98
RARA-204ENST00000394089 KCNH8Q96L42 1107 aa33.63■■■□□ 2.97
RARA-204ENST00000394089 KDM6BO15054 1643 aa33.62■■■□□ 2.97
RARA-204ENST00000394089 WDR7Q9Y4E6 1490 aa33.62■■■□□ 2.97
RARA-204ENST00000394089 ARHGAP5Q13017 1502 aa33.61■■■□□ 2.97
RARA-204ENST00000394089 NCOA1Q15788 1441 aa33.61■■■□□ 2.97
RARA-204ENST00000394089 MBD5Q9P267 1494 aa33.61■■■□□ 2.97
RARA-204ENST00000394089 PLCH2O75038 1416 aa33.59■■■□□ 2.97
RARA-204ENST00000394089 RSPH4AQ5TD94 716 aa33.56■■■□□ 2.96
RARA-204ENST00000394089 ANKRD30AQ9BXX3 1397 aa33.56■■■□□ 2.96
RARA-204ENST00000394089 PLEKHH2Q8IVE3 1493 aa33.55■■■□□ 2.96
RARA-204ENST00000394089 C9orf84Q5VXU9 1444 aa33.54■■■□□ 2.96
RARA-204ENST00000394089 CCDC141Q6ZP82 1450 aa33.53■■■□□ 2.96
RARA-204ENST00000394089 KIAA1107Q9UPP5 1409 aa33.53■■■□□ 2.96
RARA-204ENST00000394089 HNRNPMP52272 730 aaKnown RBP eCLIP33.52■■■□□ 2.96
RARA-204ENST00000394089 ARAP3Q8WWN8 1544 aa33.52■■■□□ 2.96
RARA-204ENST00000394089 TSPY4P0CV99 314 aa33.5■■■□□ 2.95
RARA-204ENST00000394089 TSPY10P0CW01 314 aa33.5■■■□□ 2.95
RARA-204ENST00000394089 ASXL2Q76L83 1435 aa33.5■■■□□ 2.95
RARA-204ENST00000394089 ZNF316A6NFI3 1004 aaPredicted RBP33.49■■■□□ 2.95
RARA-204ENST00000394089 SYCP2Q9BX26 1530 aa33.47■■■□□ 2.95
RARA-204ENST00000394089 NPM1P06748 294 aaKnown RBP eCLIP33.47■■■□□ 2.95
RARA-204ENST00000394089 EFCAB2Q5VUJ9 269 aa33.46■■■□□ 2.95
RARA-204ENST00000394089 TRIM52Q96A61 297 aa33.45■■■□□ 2.95
RARA-204ENST00000394089 ABCA9Q8IUA7 1624 aa33.45■■■□□ 2.95
RARA-204ENST00000394089 TIMELESSQ9UNS1 1208 aa33.43■■■□□ 2.94
RARA-204ENST00000394089 MAST1Q9Y2H9 1570 aa33.43■■■□□ 2.94
RARA-204ENST00000394089 SIN3AQ96ST3 1273 aa33.41■■■□□ 2.94
RARA-204ENST00000394089 DENND4BO75064 1496 aaPredicted RBP33.4■■■□□ 2.94
RARA-204ENST00000394089 ABCC1P33527 1531 aa33.38■■■□□ 2.93
RARA-204ENST00000394089 ANKRD50Q9ULJ7 1429 aa33.38■■■□□ 2.93
RARA-204ENST00000394089 MPHOSPH9Q99550 1183 aa33.38■■■□□ 2.93
RARA-204ENST00000394089 ARHGEF12Q9NZN5 1544 aa33.36■■■□□ 2.93
RARA-204ENST00000394089 KIF15Q9NS87 1388 aa33.33■■■□□ 2.93
RARA-204ENST00000394089 RIMBP3CA6NJZ7 1639 aa33.3■■■□□ 2.92
RARA-204ENST00000394089 RIMBP3BA6NNM3 1639 aa33.3■■■□□ 2.92
RARA-204ENST00000394089 RIMBP3Q9UFD9 1639 aa33.3■■■□□ 2.92
RARA-204ENST00000394089 PLXNC1O60486 1568 aa33.27■■■□□ 2.92
RARA-204ENST00000394089 PZPP20742 1482 aa33.26■■■□□ 2.92
RARA-204ENST00000394089 FANCAO15360 1455 aa33.26■■■□□ 2.91
RARA-204ENST00000394089 TRAPPC8Q9Y2L5 1435 aa33.22■■■□□ 2.91
RARA-204ENST00000394089 SLC4A1APQ9BWU0 796 aaKnown RBP33.21■■■□□ 2.91
RARA-204ENST00000394089 KDM5DQ9BY66 1539 aa33.2■■■□□ 2.91
RARA-204ENST00000394089 TONSLQ96HA7 1378 aa33.18■■■□□ 2.9
RARA-204ENST00000394089 CYB5RLQ6IPT4 315 aa33.18■■■□□ 2.9
RARA-204ENST00000394089 ANKRD30BQ9BXX2 1392 aa33.16■■■□□ 2.9
RARA-204ENST00000394089 RTEL1-TNFRSF6BF6WH68 1400 aa33.15■■■□□ 2.9
RARA-204ENST00000394089 DUOX2Q9NRD8 1548 aa33.14■■■□□ 2.9
RARA-204ENST00000394089 PPP1R15AO75807 674 aaPredicted RBP33.13■■■□□ 2.89
RARA-204ENST00000394089 CD109Q6YHK3 1445 aa33.13■■■□□ 2.89
RARA-204ENST00000394089 ADGRL1O94910 1474 aa33.12■■■□□ 2.89
RARA-204ENST00000394089 NUP155O75694 1391 aa33.12■■■□□ 2.89
RARA-204ENST00000394089 FOXD1Q16676 465 aa33.1■■■□□ 2.89
RARA-204ENST00000394089 CFAP74Q9C0B2 1584 aa33.09■■■□□ 2.89
RARA-204ENST00000394089 SPAG9O60271 1321 aaKnown RBP33.09■■■□□ 2.89
RARA-204ENST00000394089 ERBINQ96RT1 1412 aa33.08■■■□□ 2.89
RARA-204ENST00000394089 SCAPERQ9BY12 1400 aa33.08■■■□□ 2.89
RARA-204ENST00000394089 ZFYVE16Q7Z3T8 1539 aa33.07■■■□□ 2.89
RARA-204ENST00000394089 UNC13BO14795 1591 aa33.06■■■□□ 2.88
RARA-204ENST00000394089 AFAP1Q8N556 730 aa33.06■■■□□ 2.88
RARA-204ENST00000394089 MIER1Q8N108 512 aa33.06■■■□□ 2.88
RARA-204ENST00000394089 RPRD2Q5VT52 1461 aaKnown RBP33.04■■■□□ 2.88
RARA-204ENST00000394089 INO80Q9ULG1 1556 aaPredicted RBP33.03■■■□□ 2.88
RARA-204ENST00000394089 PKD2Q13563 968 aa33.02■■■□□ 2.88
RARA-204ENST00000394089 ATP7AQ04656 1500 aa32.99■■■□□ 2.87
RARA-204ENST00000394089 GLI2P10070 1586 aa32.98■■■□□ 2.87
RARA-204ENST00000394089 FAM135AQ9P2D6 1515 aa32.97■■■□□ 2.87
RARA-204ENST00000394089 YTHDC1Q96MU7 727 aaKnown RBP32.97■■■□□ 2.87
RARA-204ENST00000394089 MAGI2Q86UL8 1455 aa32.96■■■□□ 2.87
RARA-204ENST00000394089 DNAJC5Q9H3Z4 198 aa32.95■■■□□ 2.87
RARA-204ENST00000394089 NEO1Q92859 1461 aa32.95■■■□□ 2.87
RARA-204ENST00000394089 ZNF518AQ6AHZ1 1483 aa32.94■■■□□ 2.86
RARA-204ENST00000394089 MAP3K4Q9Y6R4 1608 aa32.93■■■□□ 2.86
RARA-204ENST00000394089 IQGAP3Q86VI3 1631 aa32.92■■■□□ 2.86
RARA-204ENST00000394089 POGZQ7Z3K3 1410 aa32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms