RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 ZNF777Q9ULD5 760 aaPredicted RBP15.98■□□□□ 0.15
CASP3-202ENST00000393585 GCC2Q8IWJ2 1684 aa15.98■□□□□ 0.15
CASP3-202ENST00000393585 ITSN2Q9NZM3 1697 aa15.97■□□□□ 0.15
CASP3-202ENST00000393585 ABCC5O15440 1437 aa15.97■□□□□ 0.15
CASP3-202ENST00000393585 DNMT1P26358 1616 aaKnown RBP15.97■□□□□ 0.15
CASP3-202ENST00000393585 KDM6BO15054 1643 aa15.96■□□□□ 0.15
CASP3-202ENST00000393585 CAMSAP2Q08AD1 1489 aa15.96■□□□□ 0.15
CASP3-202ENST00000393585 CLASP1Q7Z460 1538 aa15.96■□□□□ 0.14
CASP3-202ENST00000393585 AKNAQ7Z591 1439 aa15.95■□□□□ 0.14
CASP3-202ENST00000393585 ABCC10Q5T3U5 1492 aa15.93■□□□□ 0.14
CASP3-202ENST00000393585 CDC42BPAQ5VT25 1732 aa15.93■□□□□ 0.14
CASP3-202ENST00000393585 TRIM52Q96A61 297 aa15.92■□□□□ 0.14
CASP3-202ENST00000393585 ROCK1Q13464 1354 aa15.9■□□□□ 0.14
CASP3-202ENST00000393585 ABCC2Q92887 1545 aa15.89■□□□□ 0.13
CASP3-202ENST00000393585 DENND4BO75064 1496 aaPredicted RBP15.87■□□□□ 0.13
CASP3-202ENST00000393585 TIMELESSQ9UNS1 1208 aa15.84■□□□□ 0.13
CASP3-202ENST00000393585 CROCC2H7BZ55 1655 aa15.84■□□□□ 0.13
CASP3-202ENST00000393585 NCOA1Q15788 1441 aa15.84■□□□□ 0.13
CASP3-202ENST00000393585 TONSLQ96HA7 1378 aa15.84■□□□□ 0.13
CASP3-202ENST00000393585 MPHOSPH9Q99550 1183 aa15.83■□□□□ 0.12
CASP3-202ENST00000393585 ADGBQ8N7X0 1667 aa15.82■□□□□ 0.12
CASP3-202ENST00000393585 PPP1R15AO75807 674 aaPredicted RBP15.81■□□□□ 0.12
CASP3-202ENST00000393585 CDC42BPBQ9Y5S2 1711 aa15.81■□□□□ 0.12
CASP3-202ENST00000393585 TTC37Q6PGP7 1564 aa15.81■□□□□ 0.12
CASP3-202ENST00000393585 HNRNPMP52272 730 aaKnown RBP eCLIP15.81■□□□□ 0.12
CASP3-202ENST00000393585 KCNH8Q96L42 1107 aa15.81■□□□□ 0.12
CASP3-202ENST00000393585 ADGRL2O95490 1459 aa15.8■□□□□ 0.12
CASP3-202ENST00000393585 PREX2Q70Z35 1606 aa15.8■□□□□ 0.12
CASP3-202ENST00000393585 MIER1Q8N108 512 aa15.8■□□□□ 0.12
CASP3-202ENST00000393585 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.79■□□□□ 0.12
CASP3-202ENST00000393585 ZCCHC11Q5TAX3 1644 aaKnown RBP15.79■□□□□ 0.12
CASP3-202ENST00000393585 ANKRD30AQ9BXX3 1397 aa15.79■□□□□ 0.12
CASP3-202ENST00000393585 SAMD9LQ8IVG5 1584 aa15.78■□□□□ 0.12
CASP3-202ENST00000393585 C9orf84Q5VXU9 1444 aa15.78■□□□□ 0.12
CASP3-202ENST00000393585 PPP6R1Q9UPN7 881 aa15.78■□□□□ 0.12
CASP3-202ENST00000393585 UHRF1BP1LA0JNW5 1464 aa15.77■□□□□ 0.12
CASP3-202ENST00000393585 TSPY4P0CV99 314 aa15.76■□□□□ 0.11
CASP3-202ENST00000393585 TSPY10P0CW01 314 aa15.76■□□□□ 0.11
CASP3-202ENST00000393585 SLC4A1APQ9BWU0 796 aaKnown RBP15.76■□□□□ 0.11
CASP3-202ENST00000393585 MBD5Q9P267 1494 aa15.76■□□□□ 0.11
CASP3-202ENST00000393585 KDM5BQ9UGL1 1544 aa15.76■□□□□ 0.11
CASP3-202ENST00000393585 ADRA2BP18089 450 aa15.76■□□□□ 0.11
CASP3-202ENST00000393585 ARHGAP5Q13017 1502 aa15.76■□□□□ 0.11
CASP3-202ENST00000393585 SHANK2Q9UPX8 1470 aa15.75■□□□□ 0.11
CASP3-202ENST00000393585 ANKRD50Q9ULJ7 1429 aa15.74■□□□□ 0.11
CASP3-202ENST00000393585 ARHGEF5Q12774 1597 aa15.74■□□□□ 0.11
CASP3-202ENST00000393585 MYO5CQ9NQX4 1742 aa15.73■□□□□ 0.11
CASP3-202ENST00000393585 SYCP2Q9BX26 1530 aa15.73■□□□□ 0.11
CASP3-202ENST00000393585 PZPP20742 1482 aa15.72■□□□□ 0.11
CASP3-202ENST00000393585 CCDC141Q6ZP82 1450 aa15.72■□□□□ 0.11
CASP3-202ENST00000393585 HIRIP3Q9BW71 556 aaPredicted RBP15.72■□□□□ 0.11
CASP3-202ENST00000393585 ACIN1Q9UKV3 1341 aaKnown RBP15.71■□□□□ 0.11
CASP3-202ENST00000393585 ANKRD30BQ9BXX2 1392 aa15.71■□□□□ 0.11
CASP3-202ENST00000393585 SLC24A1O60721 1099 aa15.71■□□□□ 0.11
CASP3-202ENST00000393585 OSCARQ8IYS5 282 aa15.71■□□□□ 0.11
CASP3-202ENST00000393585 KIF15Q9NS87 1388 aa15.7■□□□□ 0.1
CASP3-202ENST00000393585 PLCH2O75038 1416 aa15.66■□□□□ 0.1
CASP3-202ENST00000393585 RSPH4AQ5TD94 716 aa15.66■□□□□ 0.1
CASP3-202ENST00000393585 L3MBTL2Q969R5 705 aa15.66■□□□□ 0.1
CASP3-202ENST00000393585 RPRD2Q5VT52 1461 aaKnown RBP15.66■□□□□ 0.1
CASP3-202ENST00000393585 NUP155O75694 1391 aa15.66■□□□□ 0.1
CASP3-202ENST00000393585 PKD2Q13563 968 aa15.65■□□□□ 0.1
CASP3-202ENST00000393585 ARHGEF12Q9NZN5 1544 aa15.65■□□□□ 0.1
CASP3-202ENST00000393585 YTHDC1Q96MU7 727 aaKnown RBP15.65■□□□□ 0.1
CASP3-202ENST00000393585 KIAA1107Q9UPP5 1409 aa15.63■□□□□ 0.09
CASP3-202ENST00000393585 EFCAB2Q5VUJ9 269 aa15.63■□□□□ 0.09
CASP3-202ENST00000393585 PLEKHH2Q8IVE3 1493 aa15.63■□□□□ 0.09
CASP3-202ENST00000393585 WDR7Q9Y4E6 1490 aa15.63■□□□□ 0.09
CASP3-202ENST00000393585 DDX10Q13206 875 aaKnown RBP15.61■□□□□ 0.09
CASP3-202ENST00000393585 TEX14Q8IWB6 1497 aa15.61■□□□□ 0.09
CASP3-202ENST00000393585 MAST1Q9Y2H9 1570 aa15.61■□□□□ 0.09
CASP3-202ENST00000393585 ABCC1P33527 1531 aa15.59■□□□□ 0.09
CASP3-202ENST00000393585 TRAPPC8Q9Y2L5 1435 aa15.58■□□□□ 0.09
CASP3-202ENST00000393585 KDM5DQ9BY66 1539 aa15.58■□□□□ 0.08
CASP3-202ENST00000393585 ASXL2Q76L83 1435 aa15.58■□□□□ 0.08
CASP3-202ENST00000393585 CENPBP07199 599 aaPredicted RBP15.57■□□□□ 0.08
CASP3-202ENST00000393585 NBPF8Q3BBV2 869 aa15.56■□□□□ 0.08
CASP3-202ENST00000393585 PLXNC1O60486 1568 aa15.56■□□□□ 0.08
CASP3-202ENST00000393585 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.55■□□□□ 0.08
CASP3-202ENST00000393585 AFAP1Q8N556 730 aa15.54■□□□□ 0.08
CASP3-202ENST00000393585 FAM135AQ9P2D6 1515 aa15.54■□□□□ 0.08
CASP3-202ENST00000393585 ABCA9Q8IUA7 1624 aa15.54■□□□□ 0.08
CASP3-202ENST00000393585 ARAP3Q8WWN8 1544 aa15.54■□□□□ 0.08
CASP3-202ENST00000393585 NPM1P06748 294 aaKnown RBP eCLIP15.53■□□□□ 0.08
CASP3-202ENST00000393585 HSPA5P11021 654 aaKnown RBP15.53■□□□□ 0.08
CASP3-202ENST00000393585 FANCAO15360 1455 aa15.53■□□□□ 0.08
CASP3-202ENST00000393585 DUOX2Q9NRD8 1548 aa15.51■□□□□ 0.07
CASP3-202ENST00000393585 SPAG9O60271 1321 aaKnown RBP15.51■□□□□ 0.07
CASP3-202ENST00000393585 UNC13BO14795 1591 aa15.51■□□□□ 0.07
CASP3-202ENST00000393585 EIF4G2P78344 907 aaKnown RBP eCLIP15.5■□□□□ 0.07
CASP3-202ENST00000393585 SCAF1Q9H7N4 1312 aaKnown RBP15.5■□□□□ 0.07
CASP3-202ENST00000393585 ZNF326Q5BKZ1 582 aaKnown RBP15.49■□□□□ 0.07
CASP3-202ENST00000393585 ERBINQ96RT1 1412 aa15.48■□□□□ 0.07
CASP3-202ENST00000393585 ZFYVE16Q7Z3T8 1539 aa15.48■□□□□ 0.07
CASP3-202ENST00000393585 ADGRL1O94910 1474 aa15.47■□□□□ 0.07
CASP3-202ENST00000393585 SCAPERQ9BY12 1400 aa15.46■□□□□ 0.07
CASP3-202ENST00000393585 MYT1LQ9UL68 1186 aa15.45■□□□□ 0.06
CASP3-202ENST00000393585 IQGAP3Q86VI3 1631 aa15.45■□□□□ 0.06
CASP3-202ENST00000393585 WASHC2AQ641Q2 1341 aa15.45■□□□□ 0.06
CASP3-202ENST00000393585 RTEL1-TNFRSF6BF6WH68 1400 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms