RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 CDC42BPAQ5VT25 1732 aa25.84■■□□□ 1.73
SHTN1-203ENST00000392901 UHRF1BP1LA0JNW5 1464 aa25.82■■□□□ 1.72
SHTN1-203ENST00000392901 KCNH8Q96L42 1107 aa25.81■■□□□ 1.72
SHTN1-203ENST00000392901 AKNAQ7Z591 1439 aa25.81■■□□□ 1.72
SHTN1-203ENST00000392901 ZCCHC11Q5TAX3 1644 aaKnown RBP25.78■■□□□ 1.72
SHTN1-203ENST00000392901 GCC2Q8IWJ2 1684 aa25.77■■□□□ 1.72
SHTN1-203ENST00000392901 KDM5BQ9UGL1 1544 aa25.77■■□□□ 1.72
SHTN1-203ENST00000392901 ROCK1Q13464 1354 aa25.77■■□□□ 1.72
SHTN1-203ENST00000392901 ZNF316A6NFI3 1004 aaPredicted RBP25.76■■□□□ 1.71
SHTN1-203ENST00000392901 SIN3AQ96ST3 1273 aa25.76■■□□□ 1.71
SHTN1-203ENST00000392901 NEUROD1Q13562 356 aa25.74■■□□□ 1.71
SHTN1-203ENST00000392901 TRIM52Q96A61 297 aa25.74■■□□□ 1.71
SHTN1-203ENST00000392901 KDM6BO15054 1643 aa25.73■■□□□ 1.71
SHTN1-203ENST00000392901 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.72■■□□□ 1.71
SHTN1-203ENST00000392901 TTC37Q6PGP7 1564 aa25.7■■□□□ 1.7
SHTN1-203ENST00000392901 HNRNPMP52272 730 aaKnown RBP eCLIP25.7■■□□□ 1.7
SHTN1-203ENST00000392901 CDC42BPBQ9Y5S2 1711 aa25.69■■□□□ 1.7
SHTN1-203ENST00000392901 PREX2Q70Z35 1606 aa25.68■■□□□ 1.7
SHTN1-203ENST00000392901 DIEXFQ68CQ4 756 aaKnown RBP25.68■■□□□ 1.7
SHTN1-203ENST00000392901 NCOA1Q15788 1441 aa25.66■■□□□ 1.7
SHTN1-203ENST00000392901 TSPY4P0CV99 314 aa25.65■■□□□ 1.7
SHTN1-203ENST00000392901 TSPY10P0CW01 314 aa25.65■■□□□ 1.7
SHTN1-203ENST00000392901 ARHGAP5Q13017 1502 aa25.64■■□□□ 1.7
SHTN1-203ENST00000392901 CROCC2H7BZ55 1655 aa25.64■■□□□ 1.7
SHTN1-203ENST00000392901 SAMD9LQ8IVG5 1584 aa25.63■■□□□ 1.69
SHTN1-203ENST00000392901 ANKRD30AQ9BXX3 1397 aa25.62■■□□□ 1.69
SHTN1-203ENST00000392901 ADGRL2O95490 1459 aa25.61■■□□□ 1.69
SHTN1-203ENST00000392901 ADGBQ8N7X0 1667 aa25.61■■□□□ 1.69
SHTN1-203ENST00000392901 C9orf84Q5VXU9 1444 aa25.6■■□□□ 1.69
SHTN1-203ENST00000392901 MBD5Q9P267 1494 aa25.6■■□□□ 1.69
SHTN1-203ENST00000392901 MYO5CQ9NQX4 1742 aa25.59■■□□□ 1.69
SHTN1-203ENST00000392901 MPHOSPH9Q99550 1183 aa25.59■■□□□ 1.69
SHTN1-203ENST00000392901 SHANK2Q9UPX8 1470 aa25.56■■□□□ 1.68
SHTN1-203ENST00000392901 ARHGEF5Q12774 1597 aa25.56■■□□□ 1.68
SHTN1-203ENST00000392901 PLCH2O75038 1416 aa25.56■■□□□ 1.68
SHTN1-203ENST00000392901 WDR7Q9Y4E6 1490 aa25.55■■□□□ 1.68
SHTN1-203ENST00000392901 RSPH4AQ5TD94 716 aa25.55■■□□□ 1.68
SHTN1-203ENST00000392901 ACIN1Q9UKV3 1341 aaKnown RBP25.55■■□□□ 1.68
SHTN1-203ENST00000392901 DENND4BO75064 1496 aaPredicted RBP25.54■■□□□ 1.68
SHTN1-203ENST00000392901 CCDC141Q6ZP82 1450 aa25.54■■□□□ 1.68
SHTN1-203ENST00000392901 SYCP2Q9BX26 1530 aa25.54■■□□□ 1.68
SHTN1-203ENST00000392901 NPM1P06748 294 aaKnown RBP eCLIP25.54■■□□□ 1.68
SHTN1-203ENST00000392901 TIMELESSQ9UNS1 1208 aa25.54■■□□□ 1.68
SHTN1-203ENST00000392901 EFCAB2Q5VUJ9 269 aa25.52■■□□□ 1.68
SHTN1-203ENST00000392901 ANKRD50Q9ULJ7 1429 aa25.51■■□□□ 1.67
SHTN1-203ENST00000392901 FOXD1Q16676 465 aa25.51■■□□□ 1.67
SHTN1-203ENST00000392901 ASXL2Q76L83 1435 aa25.5■■□□□ 1.67
SHTN1-203ENST00000392901 SLC4A1APQ9BWU0 796 aaKnown RBP25.5■■□□□ 1.67
SHTN1-203ENST00000392901 TONSLQ96HA7 1378 aa25.48■■□□□ 1.67
SHTN1-203ENST00000392901 PLEKHH2Q8IVE3 1493 aa25.48■■□□□ 1.67
SHTN1-203ENST00000392901 KIAA1107Q9UPP5 1409 aa25.48■■□□□ 1.67
SHTN1-203ENST00000392901 KIF15Q9NS87 1388 aa25.47■■□□□ 1.67
SHTN1-203ENST00000392901 ARHGEF12Q9NZN5 1544 aa25.44■■□□□ 1.66
SHTN1-203ENST00000392901 PPP1R15AO75807 674 aaPredicted RBP25.44■■□□□ 1.66
SHTN1-203ENST00000392901 PZPP20742 1482 aa25.4■■□□□ 1.66
SHTN1-203ENST00000392901 ABCA9Q8IUA7 1624 aa25.38■■□□□ 1.65
SHTN1-203ENST00000392901 ABCC1P33527 1531 aa25.37■■□□□ 1.65
SHTN1-203ENST00000392901 NUP155O75694 1391 aa25.37■■□□□ 1.65
SHTN1-203ENST00000392901 ARAP3Q8WWN8 1544 aa25.37■■□□□ 1.65
SHTN1-203ENST00000392901 MAST1Q9Y2H9 1570 aa25.36■■□□□ 1.65
SHTN1-203ENST00000392901 CYB5RLQ6IPT4 315 aa25.36■■□□□ 1.65
SHTN1-203ENST00000392901 ANKRD30BQ9BXX2 1392 aa25.36■■□□□ 1.65
SHTN1-203ENST00000392901 TRAPPC8Q9Y2L5 1435 aa25.35■■□□□ 1.65
SHTN1-203ENST00000392901 FANCAO15360 1455 aa25.34■■□□□ 1.65
SHTN1-203ENST00000392901 PKD2Q13563 968 aa25.33■■□□□ 1.65
SHTN1-203ENST00000392901 AFAP1Q8N556 730 aa25.32■■□□□ 1.64
SHTN1-203ENST00000392901 SPAG9O60271 1321 aaKnown RBP25.28■■□□□ 1.64
SHTN1-203ENST00000392901 PLXNC1O60486 1568 aa25.27■■□□□ 1.64
SHTN1-203ENST00000392901 MIER1Q8N108 512 aa25.25■■□□□ 1.63
SHTN1-203ENST00000392901 RIMBP3CA6NJZ7 1639 aa25.25■■□□□ 1.63
SHTN1-203ENST00000392901 RIMBP3BA6NNM3 1639 aa25.25■■□□□ 1.63
SHTN1-203ENST00000392901 RIMBP3Q9UFD9 1639 aa25.25■■□□□ 1.63
SHTN1-203ENST00000392901 ADGRL1O94910 1474 aa25.24■■□□□ 1.63
SHTN1-203ENST00000392901 RPRD2Q5VT52 1461 aaKnown RBP25.24■■□□□ 1.63
SHTN1-203ENST00000392901 L3MBTL2Q969R5 705 aa25.24■■□□□ 1.63
SHTN1-203ENST00000392901 SCAPERQ9BY12 1400 aa25.24■■□□□ 1.63
SHTN1-203ENST00000392901 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.24■■□□□ 1.631e-6■□□□□ 11.1
SHTN1-203ENST00000392901 KDM5DQ9BY66 1539 aa25.23■■□□□ 1.63
SHTN1-203ENST00000392901 CD109Q6YHK3 1445 aa25.23■■□□□ 1.63
SHTN1-203ENST00000392901 DUOX2Q9NRD8 1548 aa25.22■■□□□ 1.63
SHTN1-203ENST00000392901 MYT1LQ9UL68 1186 aa25.21■■□□□ 1.63
SHTN1-203ENST00000392901 RTEL1-TNFRSF6BF6WH68 1400 aa25.19■■□□□ 1.62
SHTN1-203ENST00000392901 HIRIP3Q9BW71 556 aaPredicted RBP25.17■■□□□ 1.62
SHTN1-203ENST00000392901 FAM135AQ9P2D6 1515 aa25.17■■□□□ 1.62
SHTN1-203ENST00000392901 ERBINQ96RT1 1412 aa25.17■■□□□ 1.62
SHTN1-203ENST00000392901 ZFYVE16Q7Z3T8 1539 aa25.16■■□□□ 1.62
SHTN1-203ENST00000392901 UNC13BO14795 1591 aa25.13■■□□□ 1.61
SHTN1-203ENST00000392901 TEX14Q8IWB6 1497 aa25.12■■□□□ 1.61
SHTN1-203ENST00000392901 ATP7AQ04656 1500 aa25.11■■□□□ 1.61
SHTN1-203ENST00000392901 INO80Q9ULG1 1556 aaPredicted RBP25.08■■□□□ 1.61
SHTN1-203ENST00000392901 ZNF518AQ6AHZ1 1483 aa25.06■■□□□ 1.6
SHTN1-203ENST00000392901 CFAP74Q9C0B2 1584 aa25.06■■□□□ 1.6
SHTN1-203ENST00000392901 NBPF8Q3BBV2 869 aa25.05■■□□□ 1.6
SHTN1-203ENST00000392901 IQGAP3Q86VI3 1631 aa25.04■■□□□ 1.6
SHTN1-203ENST00000392901 MAGI2Q86UL8 1455 aa25.04■■□□□ 1.6
SHTN1-203ENST00000392901 KIF3BO15066 747 aa25.01■■□□□ 1.59
SHTN1-203ENST00000392901 POGZQ7Z3K3 1410 aa25■■□□□ 1.59
SHTN1-203ENST00000392901 DHX29Q7Z478 1369 aaKnown RBP25■■□□□ 1.59
SHTN1-203ENST00000392901 FAM69CQ0P6D2 419 aa24.99■■□□□ 1.59
SHTN1-203ENST00000392901 KIDINS220Q9ULH0 1771 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms