RNA–Protein interactions for RNA: ENST00000392521.6

CIT-203, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CIT, Length 8,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-203ENST00000392521 CHMP3Q9Y3E7 222 aa15.04■□□□□ -0
CIT-203ENST00000392521 HDGFP51858 240 aaKnown RBP15.04■□□□□ -0
CIT-203ENST00000392521 GORABQ5T7V8 394 aa15.04■□□□□ -0
CIT-203ENST00000392521 TAF7LQ5H9L4 462 aa15.03■□□□□ -0
CIT-203ENST00000392521 RASSF8Q8NHQ8 419 aa15.03■□□□□ -0
CIT-203ENST00000392521 HTATSF1O43719 755 aaKnown RBP15.03■□□□□ -0
CIT-203ENST00000392521 CFDP1Q9UEE9 299 aaPredicted RBP15.03■□□□□ -0
CIT-203ENST00000392521 VPS53Q5VIR6 699 aa15.03■□□□□ -0
CIT-203ENST00000392521 ZCCHC6Q5VYS8 1495 aaKnown RBP15.02■□□□□ -0
CIT-203ENST00000392521 MLECQ14165 292 aa15.02□□□□□ -0.01
CIT-203ENST00000392521 CCDC34Q96HJ3 373 aa15.02□□□□□ -0.01
CIT-203ENST00000392521 PPP4R2Q9NY27 417 aa15.01□□□□□ -0.01
CIT-203ENST00000392521 FBXO3Q9UK99 471 aa15.01□□□□□ -0.01
CIT-203ENST00000392521 CCDC9Q9Y3X0 531 aaKnown RBP15.01□□□□□ -0.01
CIT-203ENST00000392521 GPATCH3Q96I76 525 aa14.99□□□□□ -0.01
CIT-203ENST00000392521 CSB-PGBD3P0DP91 1061 aa14.99□□□□□ -0.01
CIT-203ENST00000392521 SAFB2Q14151 953 aaKnown RBP eCLIP14.99□□□□□ -0.01
CIT-203ENST00000392521 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.99□□□□□ -0.01
CIT-203ENST00000392521 DCAF1Q9Y4B6 1507 aa14.98□□□□□ -0.01
CIT-203ENST00000392521 B4GALNT3Q6L9W6 998 aa14.98□□□□□ -0.01
CIT-203ENST00000392521 PTMSP20962 102 aa14.98□□□□□ -0.01
CIT-203ENST00000392521 SYAP1Q96A49 352 aaPredicted RBP14.98□□□□□ -0.01
CIT-203ENST00000392521 USP35Q9P2H5 1018 aa14.98□□□□□ -0.01
CIT-203ENST00000392521 KANK1Q14678 1352 aa14.98□□□□□ -0.01
CIT-203ENST00000392521 GBP4Q96PP9 640 aa14.97□□□□□ -0.01
CIT-203ENST00000392521 TMF1P82094 1093 aa14.97□□□□□ -0.01
CIT-203ENST00000392521 GZF1Q9H116 711 aaPredicted RBP14.96□□□□□ -0.01
CIT-203ENST00000392521 KAT6BQ8WYB5 2073 aa14.96□□□□□ -0.01
CIT-203ENST00000392521 MARCH6O60337 910 aa14.96□□□□□ -0.02
CIT-203ENST00000392521 MORC1Q86VD1 984 aa14.95□□□□□ -0.02
CIT-203ENST00000392521 CLIP1P30622 1438 aa14.95□□□□□ -0.02
CIT-203ENST00000392521 WWC1Q8IX03 1113 aa14.95□□□□□ -0.02
CIT-203ENST00000392521 TRIM6-TRIM34B2RNG4 842 aa14.94□□□□□ -0.02
CIT-203ENST00000392521 PES1O00541 588 aaKnown RBP14.93□□□□□ -0.02
CIT-203ENST00000392521 IPO8O15397 1037 aaKnown RBP14.93□□□□□ -0.02
CIT-203ENST00000392521 FRAT2O75474 233 aaPredicted RBP14.93□□□□□ -0.02
CIT-203ENST00000392521 STK26Q9P289 416 aa14.93□□□□□ -0.02
CIT-203ENST00000392521 CNKSR2Q8WXI2 1034 aa14.92□□□□□ -0.02
CIT-203ENST00000392521 TPM3P06753 285 aa14.91□□□□□ -0.02
CIT-203ENST00000392521 CSPP1Q1MSJ5 1256 aa14.91□□□□□ -0.02
CIT-203ENST00000392521 ERCC6Q03468 1493 aa14.91□□□□□ -0.02
CIT-203ENST00000392521 DCAF11Q8TEB1 546 aa14.9□□□□□ -0.02
CIT-203ENST00000392521 SETQ01105 290 aaPredicted RBP14.9□□□□□ -0.02
CIT-203ENST00000392521 TPD52L1Q16890 204 aaPredicted RBP14.9□□□□□ -0.02
CIT-203ENST00000392521 CALD1Q05682 793 aaKnown RBP14.89□□□□□ -0.03
CIT-203ENST00000392521 HDGFL2Q7Z4V5 671 aaPredicted RBP14.89□□□□□ -0.03
CIT-203ENST00000392521 ITPRIPQ8IWB1 547 aa14.89□□□□□ -0.03
CIT-203ENST00000392521 TCEAL9Q9UHQ7 104 aa14.89□□□□□ -0.03
CIT-203ENST00000392521 SPAG9O60271 1321 aaKnown RBP14.88□□□□□ -0.03
CIT-203ENST00000392521 TSR1Q2NL82 804 aaKnown RBP14.88□□□□□ -0.03
CIT-203ENST00000392521 GTF2E1P29083 439 aaPredicted RBP14.87□□□□□ -0.03
CIT-203ENST00000392521 TOMM22Q9NS69 142 aa14.86□□□□□ -0.03
CIT-203ENST00000392521 PATL2C9JE40 543 aaKnown RBP14.85□□□□□ -0.03
CIT-203ENST00000392521 DEKP35659 375 aaKnown RBP14.85□□□□□ -0.03
CIT-203ENST00000392521 SF3A1Q15459 793 aaKnown RBP14.84□□□□□ -0.03
CIT-203ENST00000392521 PHF14O94880 888 aa14.84□□□□□ -0.03
CIT-203ENST00000392521 STK31Q9BXU1 1019 aa14.83□□□□□ -0.04
CIT-203ENST00000392521 SLKQ9H2G2 1235 aaPredicted RBP14.83□□□□□ -0.04
CIT-203ENST00000392521 EIF4G1Q04637 1599 aaKnown RBP14.82□□□□□ -0.04
CIT-203ENST00000392521 TPM2P07951 284 aa14.82□□□□□ -0.04
CIT-203ENST00000392521 CHMP4AQ9BY43 222 aa14.82□□□□□ -0.04
CIT-203ENST00000392521 NOL8Q76FK4 1167 aaKnown RBP14.81□□□□□ -0.04
CIT-203ENST00000392521 SLC4A10Q6U841 1118 aa14.81□□□□□ -0.04
CIT-203ENST00000392521 KIF16BQ96L93 1317 aa14.8□□□□□ -0.04
CIT-203ENST00000392521 TRIM34Q9BYJ4 488 aa14.8□□□□□ -0.04
CIT-203ENST00000392521 CTDP1Q9Y5B0 961 aaPredicted RBP14.8□□□□□ -0.04
CIT-203ENST00000392521 CCAR2Q8N163 923 aaKnown RBP14.8□□□□□ -0.04
CIT-203ENST00000392521 CCDC180Q9P1Z9 1646 aa14.8□□□□□ -0.04
CIT-203ENST00000392521 RWDD1Q9H446 243 aaPredicted RBP14.79□□□□□ -0.04
CIT-203ENST00000392521 GOLGA3Q08378 1498 aa14.79□□□□□ -0.04
CIT-203ENST00000392521 U2AF1L5P0DN76 240 aaPredicted RBP14.79□□□□□ -0.04
CIT-203ENST00000392521 U2AF1Q01081 240 aaKnown RBP eCLIP14.79□□□□□ -0.04
CIT-203ENST00000392521 HDAC5Q9UQL6 1122 aa14.79□□□□□ -0.04
CIT-203ENST00000392521 H3BQV1 296 aa14.79□□□□□ -0.04
CIT-203ENST00000392521 RAD21O60216 631 aa14.79□□□□□ -0.04
CIT-203ENST00000392521 IFFO2Q5TF58 517 aa14.79□□□□□ -0.04
CIT-203ENST00000392521 MFAP1P55081 439 aaKnown RBP14.78□□□□□ -0.04
CIT-203ENST00000392521 CCDC70Q6NSX1 233 aa14.78□□□□□ -0.04
CIT-203ENST00000392521 AKAP17AQ02040 695 aaKnown RBP14.78□□□□□ -0.04
CIT-203ENST00000392521 KIF3AQ9Y496 699 aa14.78□□□□□ -0.04
CIT-203ENST00000392521 HMMRO75330 724 aa14.76□□□□□ -0.05
CIT-203ENST00000392521 TPM1P09493 284 aa14.76□□□□□ -0.05
CIT-203ENST00000392521 GGT6Q6P531 493 aa14.76□□□□□ -0.05
CIT-203ENST00000392521 MSH5O43196 834 aa14.76□□□□□ -0.05
CIT-203ENST00000392521 PMFBP1Q8TBY8 1022 aa14.76□□□□□ -0.05
CIT-203ENST00000392521 FOXD4L1Q9NU39 408 aa14.76□□□□□ -0.05
CIT-203ENST00000392521 KTN1Q86UP2 1357 aaKnown RBP14.75□□□□□ -0.05
CIT-203ENST00000392521 SIN3AQ96ST3 1273 aa14.75□□□□□ -0.05
CIT-203ENST00000392521 GOLGA6L19H0YKK7 550 aa14.75□□□□□ -0.05
CIT-203ENST00000392521 FOXD4L5Q5VV16 416 aaPredicted RBP14.75□□□□□ -0.05
CIT-203ENST00000392521 FOXD4L4Q8WXT5 416 aaPredicted RBP14.75□□□□□ -0.05
CIT-203ENST00000392521 GOLGA6L3A6NEY3 463 aa14.75□□□□□ -0.05
CIT-203ENST00000392521 CCNB3Q8WWL7 1395 aa14.74□□□□□ -0.05
CIT-203ENST00000392521 CALRP27797 417 aaKnown RBP14.74□□□□□ -0.05
CIT-203ENST00000392521 CWC22Q9HCG8 908 aaKnown RBP14.74□□□□□ -0.05
CIT-203ENST00000392521 RRP12Q5JTH9 1297 aaKnown RBP14.74□□□□□ -0.05
CIT-203ENST00000392521 SMC4Q9NTJ3 1288 aa14.74□□□□□ -0.05
CIT-203ENST00000392521 PCMTD1Q96MG8 357 aaPredicted RBP14.74□□□□□ -0.05
CIT-203ENST00000392521 FAM184AQ8NB25 1140 aa14.74□□□□□ -0.05
CIT-203ENST00000392521 AMOTL1Q8IY63 956 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms