RNA–Protein interactions for RNA: ENST00000392520.2

CIT-202, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 5,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-202ENST00000392520 MORC1Q86VD1 984 aa18.89■□□□□ 0.62
CIT-202ENST00000392520 SLKQ9H2G2 1235 aaPredicted RBP18.89■□□□□ 0.61
CIT-202ENST00000392520 ARID4BQ4LE39 1312 aaPredicted RBP18.89■□□□□ 0.61
CIT-202ENST00000392520 RALBP1Q15311 655 aa18.88■□□□□ 0.61
CIT-202ENST00000392520 TAOK2Q9UL54 1235 aa18.88■□□□□ 0.61
CIT-202ENST00000392520 GOLGA6L3A6NEY3 463 aa18.87■□□□□ 0.61
CIT-202ENST00000392520 GZF1Q9H116 711 aaPredicted RBP18.87■□□□□ 0.61
CIT-202ENST00000392520 SYAP1Q96A49 352 aaPredicted RBP18.86■□□□□ 0.61
CIT-202ENST00000392520 VPS8Q8N3P4 1428 aa18.84■□□□□ 0.61
CIT-202ENST00000392520 PMFBP1Q8TBY8 1022 aa18.82■□□□□ 0.6
CIT-202ENST00000392520 BAZ1BQ9UIG0 1483 aaKnown RBP18.82■□□□□ 0.6
CIT-202ENST00000392520 RB1CC1Q8TDY2 1594 aa18.82■□□□□ 0.6
CIT-202ENST00000392520 TULP1O00294 542 aaPredicted RBP18.82■□□□□ 0.6
CIT-202ENST00000392520 KIAA1211Q6ZU35 1233 aa18.82■□□□□ 0.6
CIT-202ENST00000392520 USP35Q9P2H5 1018 aa18.81■□□□□ 0.6
CIT-202ENST00000392520 HTATSF1O43719 755 aaKnown RBP18.8■□□□□ 0.6
CIT-202ENST00000392520 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.8■□□□□ 0.6
CIT-202ENST00000392520 KANK1Q14678 1352 aa18.79■□□□□ 0.6
CIT-202ENST00000392520 CALD1Q05682 793 aaKnown RBP18.79■□□□□ 0.6
CIT-202ENST00000392520 ARHGAP35Q9NRY4 1499 aa18.78■□□□□ 0.6
CIT-202ENST00000392520 PDE3BQ13370 1112 aa18.77■□□□□ 0.6
CIT-202ENST00000392520 SRPK2P78362 688 aaKnown RBP18.77■□□□□ 0.6
CIT-202ENST00000392520 GOLGA2Q08379 1002 aa18.77■□□□□ 0.6
CIT-202ENST00000392520 ITPRIPQ8IWB1 547 aa18.76■□□□□ 0.59
CIT-202ENST00000392520 LMOD2Q6P5Q4 547 aa18.75■□□□□ 0.59
CIT-202ENST00000392520 PKD2Q13563 968 aa18.75■□□□□ 0.59
CIT-202ENST00000392520 RTF1Q92541 710 aaKnown RBP18.74■□□□□ 0.59
CIT-202ENST00000392520 RAB3GAP2Q9H2M9 1393 aa18.74■□□□□ 0.59
CIT-202ENST00000392520 GNL2Q13823 731 aaKnown RBP18.74■□□□□ 0.59
CIT-202ENST00000392520 AMER1Q5JTC6 1135 aaPredicted RBP18.74■□□□□ 0.59
CIT-202ENST00000392520 APBB1O00213 710 aa18.73■□□□□ 0.59
CIT-202ENST00000392520 MFAP1P55081 439 aaKnown RBP18.73■□□□□ 0.59
CIT-202ENST00000392520 CARMIL1Q5VZK9 1371 aa18.73■□□□□ 0.59
CIT-202ENST00000392520 SOGA1O94964 1423 aa18.72■□□□□ 0.59
CIT-202ENST00000392520 U2AF1L5P0DN76 240 aaPredicted RBP18.72■□□□□ 0.59
CIT-202ENST00000392520 U2AF1Q01081 240 aaKnown RBP eCLIP18.72■□□□□ 0.59
CIT-202ENST00000392520 ARID3AQ99856 593 aa18.71■□□□□ 0.59
CIT-202ENST00000392520 TNNT3P45378 269 aaPredicted RBP18.7■□□□□ 0.58
CIT-202ENST00000392520 RSPH6AQ9H0K4 717 aa18.7■□□□□ 0.58
CIT-202ENST00000392520 TPM4P67936 248 aa18.69■□□□□ 0.58
CIT-202ENST00000392520 NLRP13Q86W25 1043 aa18.69■□□□□ 0.58
CIT-202ENST00000392520 ROCK2O75116 1388 aaKnown RBP18.69■□□□□ 0.58
CIT-202ENST00000392520 CSPP1Q1MSJ5 1256 aa18.69■□□□□ 0.58
CIT-202ENST00000392520 HDGFL2Q7Z4V5 671 aaPredicted RBP18.69■□□□□ 0.58
CIT-202ENST00000392520 MPHOSPH9Q99550 1183 aa18.68■□□□□ 0.58
CIT-202ENST00000392520 KANK4Q5T7N3 995 aaPredicted RBP18.68■□□□□ 0.58
CIT-202ENST00000392520 NPHP1O15259 732 aa18.67■□□□□ 0.58
CIT-202ENST00000392520 HDGFP51858 240 aaKnown RBP18.67■□□□□ 0.58
CIT-202ENST00000392520 HSP90AA2PQ14568 343 aaPredicted RBP18.67■□□□□ 0.58
CIT-202ENST00000392520 CHMP4AQ9BY43 222 aa18.67■□□□□ 0.58
CIT-202ENST00000392520 DDX11L8A8MPP1 907 aa18.66■□□□□ 0.58
CIT-202ENST00000392520 PHF14O94880 888 aa18.65■□□□□ 0.58
CIT-202ENST00000392520 SMC4Q9NTJ3 1288 aa18.65■□□□□ 0.58
CIT-202ENST00000392520 BAZ1AQ9NRL2 1556 aaPredicted RBP18.65■□□□□ 0.58
CIT-202ENST00000392520 HMMRO75330 724 aa18.65■□□□□ 0.58
CIT-202ENST00000392520 FOXD1Q16676 465 aa18.65■□□□□ 0.58
CIT-202ENST00000392520 PHLDB1Q86UU1 1377 aa18.64■□□□□ 0.57
CIT-202ENST00000392520 CENPJQ9HC77 1338 aaPredicted RBP18.63■□□□□ 0.57
CIT-202ENST00000392520 CCDC34Q96HJ3 373 aa18.63■□□□□ 0.57
CIT-202ENST00000392520 GSE1Q14687 1217 aa18.63■□□□□ 0.57
CIT-202ENST00000392520 CUX2O14529 1486 aa18.63■□□□□ 0.57
CIT-202ENST00000392520 FMN1Q68DA7 1419 aa18.62■□□□□ 0.57
CIT-202ENST00000392520 SOX12O15370 315 aa18.62■□□□□ 0.57
CIT-202ENST00000392520 SAFB2Q14151 953 aaKnown RBP eCLIP18.62■□□□□ 0.57
CIT-202ENST00000392520 ST18O60284 1047 aa18.61■□□□□ 0.57
CIT-202ENST00000392520 PDE4AP27815 886 aa18.6■□□□□ 0.57
CIT-202ENST00000392520 CENPQQ7L2Z9 268 aaPredicted RBP18.6■□□□□ 0.57
CIT-202ENST00000392520 GOLGA6L1Q8N7Z2 621 aa18.6■□□□□ 0.57
CIT-202ENST00000392520 HDAC5Q9UQL6 1122 aa18.6■□□□□ 0.57
CIT-202ENST00000392520 FANCIQ9NVI1 1328 aa18.6■□□□□ 0.57
CIT-202ENST00000392520 FAM161AQ3B820 660 aa18.59■□□□□ 0.57
CIT-202ENST00000392520 STK31Q9BXU1 1019 aa18.59■□□□□ 0.57
CIT-202ENST00000392520 EIF3AQ14152 1382 aaKnown RBP18.59■□□□□ 0.57
CIT-202ENST00000392520 NACADO15069 1562 aa18.59■□□□□ 0.57
CIT-202ENST00000392520 SKOR2Q2VWA4 1001 aaPredicted RBP18.58■□□□□ 0.56
CIT-202ENST00000392520 GPATCH3Q96I76 525 aa18.58■□□□□ 0.56
CIT-202ENST00000392520 NUP155O75694 1391 aa18.58■□□□□ 0.56
CIT-202ENST00000392520 L3MBTL2Q969R5 705 aa18.58■□□□□ 0.56
CIT-202ENST00000392520 CLUAP1Q96AJ1 413 aa18.58■□□□□ 0.56
CIT-202ENST00000392520 TRIM6-TRIM34B2RNG4 842 aa18.57■□□□□ 0.56
CIT-202ENST00000392520 NOC3LQ8WTT2 800 aaKnown RBP18.57■□□□□ 0.56
CIT-202ENST00000392520 EIF4G1Q04637 1599 aaKnown RBP18.56■□□□□ 0.56
CIT-202ENST00000392520 FOXD4L1Q9NU39 408 aa18.55■□□□□ 0.56
CIT-202ENST00000392520 ANKRD30AQ9BXX3 1397 aa18.55■□□□□ 0.56
CIT-202ENST00000392520 SPAG9O60271 1321 aaKnown RBP18.55■□□□□ 0.56
CIT-202ENST00000392520 KIF15Q9NS87 1388 aa18.54■□□□□ 0.56
CIT-202ENST00000392520 STK26Q9P289 416 aa18.53■□□□□ 0.56
CIT-202ENST00000392520 MYBBP1AQ9BQG0 1328 aaKnown RBP18.53■□□□□ 0.56
CIT-202ENST00000392520 DDX49Q9Y6V7 483 aaKnown RBP18.53■□□□□ 0.56
CIT-202ENST00000392520 CLSTN1O94985 981 aa18.52■□□□□ 0.56
CIT-202ENST00000392520 KIF3AQ9Y496 699 aa18.52■□□□□ 0.56
CIT-202ENST00000392520 ZBED9Q6R2W3 1325 aa18.52■□□□□ 0.55
CIT-202ENST00000392520 HSP90B1P14625 803 aaKnown RBP18.51■□□□□ 0.55
CIT-202ENST00000392520 LMOD3Q0VAK6 560 aa18.51■□□□□ 0.55
CIT-202ENST00000392520 KIF16BQ96L93 1317 aa18.51■□□□□ 0.55
CIT-202ENST00000392520 CCDC146Q8IYE0 955 aa18.51■□□□□ 0.55
CIT-202ENST00000392520 TERF2IPQ9NYB0 399 aa18.49■□□□□ 0.55
CIT-202ENST00000392520 ISY1Q9ULR0 285 aaKnown RBP18.49■□□□□ 0.55
CIT-202ENST00000392520 RRP1P56182 461 aaKnown RBP18.49■□□□□ 0.55
CIT-202ENST00000392520 NOL8Q76FK4 1167 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms