RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 DAPK1P53355 1430 aa31.45■■■□□ 2.63
SPHK1-202ENST00000392496 GCC2Q8IWJ2 1684 aa31.45■■■□□ 2.63
SPHK1-202ENST00000392496 CAMSAP2Q08AD1 1489 aa31.45■■■□□ 2.63
SPHK1-202ENST00000392496 KDM5BQ9UGL1 1544 aa31.43■■■□□ 2.62
SPHK1-202ENST00000392496 ZNF644Q9H582 1327 aaPredicted RBP31.42■■■□□ 2.62
SPHK1-202ENST00000392496 ABCC5O15440 1437 aa31.42■■■□□ 2.62
SPHK1-202ENST00000392496 NPM1P06748 294 aaKnown RBP eCLIP31.41■■■□□ 2.62
SPHK1-202ENST00000392496 ZCCHC11Q5TAX3 1644 aaKnown RBP31.4■■■□□ 2.62
SPHK1-202ENST00000392496 MAPKBP1O60336 1514 aa31.4■■■□□ 2.62
SPHK1-202ENST00000392496 ROCK1Q13464 1354 aa31.39■■■□□ 2.61
SPHK1-202ENST00000392496 CHIC2Q9UKJ5 165 aa31.35■■■□□ 2.61
SPHK1-202ENST00000392496 PREX2Q70Z35 1606 aa31.32■■■□□ 2.61
SPHK1-202ENST00000392496 RRP7BPQ9NSQ0 103 aa31.32■■■□□ 2.6
SPHK1-202ENST00000392496 CROCC2H7BZ55 1655 aa31.3■■■□□ 2.6
SPHK1-202ENST00000392496 ZNF777Q9ULD5 760 aaPredicted RBP31.29■■■□□ 2.6
SPHK1-202ENST00000392496 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.29■■■□□ 2.6
SPHK1-202ENST00000392496 CDC42BPBQ9Y5S2 1711 aa31.28■■■□□ 2.6
SPHK1-202ENST00000392496 ADGBQ8N7X0 1667 aa31.27■■■□□ 2.6
SPHK1-202ENST00000392496 TTC37Q6PGP7 1564 aa31.27■■■□□ 2.6
SPHK1-202ENST00000392496 ACIN1Q9UKV3 1341 aaKnown RBP31.25■■■□□ 2.59
SPHK1-202ENST00000392496 ADGRL2O95490 1459 aa31.23■■■□□ 2.59
SPHK1-202ENST00000392496 MYO5CQ9NQX4 1742 aa31.21■■■□□ 2.59
SPHK1-202ENST00000392496 ARHGEF5Q12774 1597 aa31.21■■■□□ 2.59
SPHK1-202ENST00000392496 SHANK2Q9UPX8 1470 aa31.21■■■□□ 2.59
SPHK1-202ENST00000392496 KDM6BO15054 1643 aa31.21■■■□□ 2.59
SPHK1-202ENST00000392496 SAMD9LQ8IVG5 1584 aa31.19■■■□□ 2.58
SPHK1-202ENST00000392496 NCOA1Q15788 1441 aa31.16■■■□□ 2.58
SPHK1-202ENST00000392496 ARHGAP5Q13017 1502 aa31.14■■■□□ 2.58
SPHK1-202ENST00000392496 KCNH8Q96L42 1107 aa31.14■■■□□ 2.58
SPHK1-202ENST00000392496 MBD5Q9P267 1494 aa31.13■■■□□ 2.57
SPHK1-202ENST00000392496 ANKRD30AQ9BXX3 1397 aa31.13■■■□□ 2.57
SPHK1-202ENST00000392496 WDR7Q9Y4E6 1490 aa31.11■■■□□ 2.57
SPHK1-202ENST00000392496 RSPH4AQ5TD94 716 aa31.11■■■□□ 2.57
SPHK1-202ENST00000392496 PLCH2O75038 1416 aa31.1■■■□□ 2.57
SPHK1-202ENST00000392496 C9orf84Q5VXU9 1444 aa31.09■■■□□ 2.57
SPHK1-202ENST00000392496 PLEKHH2Q8IVE3 1493 aa31.09■■■□□ 2.57
SPHK1-202ENST00000392496 CCDC141Q6ZP82 1450 aa31.08■■■□□ 2.57
SPHK1-202ENST00000392496 TIMELESSQ9UNS1 1208 aa31.07■■■□□ 2.56
SPHK1-202ENST00000392496 TSPY4P0CV99 314 aa31.06■■■□□ 2.56
SPHK1-202ENST00000392496 TSPY10P0CW01 314 aa31.06■■■□□ 2.56
SPHK1-202ENST00000392496 HNRNPMP52272 730 aaKnown RBP eCLIP31.06■■■□□ 2.56
SPHK1-202ENST00000392496 KIAA1107Q9UPP5 1409 aa31.06■■■□□ 2.56
SPHK1-202ENST00000392496 TRIM52Q96A61 297 aa31.05■■■□□ 2.56
SPHK1-202ENST00000392496 ZNF316A6NFI3 1004 aaPredicted RBP31.05■■■□□ 2.56
SPHK1-202ENST00000392496 SIN3AQ96ST3 1273 aa31.05■■■□□ 2.56
SPHK1-202ENST00000392496 ARAP3Q8WWN8 1544 aa31.04■■■□□ 2.56
SPHK1-202ENST00000392496 SYCP2Q9BX26 1530 aa31.02■■■□□ 2.56
SPHK1-202ENST00000392496 DENND4BO75064 1496 aaPredicted RBP31■■■□□ 2.55
SPHK1-202ENST00000392496 MAST1Q9Y2H9 1570 aa31■■■□□ 2.55
SPHK1-202ENST00000392496 ASXL2Q76L83 1435 aa31■■■□□ 2.55
SPHK1-202ENST00000392496 EFCAB2Q5VUJ9 269 aa30.99■■■□□ 2.55
SPHK1-202ENST00000392496 NEUROD1Q13562 356 aa30.98■■■□□ 2.55
SPHK1-202ENST00000392496 ABCA9Q8IUA7 1624 aa30.98■■■□□ 2.55
SPHK1-202ENST00000392496 MPHOSPH9Q99550 1183 aa30.97■■■□□ 2.55
SPHK1-202ENST00000392496 ANKRD50Q9ULJ7 1429 aa30.96■■■□□ 2.55
SPHK1-202ENST00000392496 ABCC1P33527 1531 aa30.92■■■□□ 2.54
SPHK1-202ENST00000392496 KIF15Q9NS87 1388 aa30.91■■■□□ 2.54
SPHK1-202ENST00000392496 ARHGEF12Q9NZN5 1544 aa30.9■■■□□ 2.54
SPHK1-202ENST00000392496 PZPP20742 1482 aa30.87■■■□□ 2.53
SPHK1-202ENST00000392496 PLXNC1O60486 1568 aa30.85■■■□□ 2.53
SPHK1-202ENST00000392496 TONSLQ96HA7 1378 aa30.84■■■□□ 2.53
SPHK1-202ENST00000392496 TRHP20396 242 aaPredicted RBP30.83■■■□□ 2.53
SPHK1-202ENST00000392496 SLC4A1APQ9BWU0 796 aaKnown RBP30.82■■■□□ 2.52
SPHK1-202ENST00000392496 KDM5DQ9BY66 1539 aa30.81■■■□□ 2.52
SPHK1-202ENST00000392496 FAM69CQ0P6D2 419 aa30.81■■■□□ 2.52
SPHK1-202ENST00000392496 PPP1R15AO75807 674 aaPredicted RBP30.8■■■□□ 2.52
SPHK1-202ENST00000392496 FANCAO15360 1455 aa30.79■■■□□ 2.52
SPHK1-202ENST00000392496 DIEXFQ68CQ4 756 aaKnown RBP30.79■■■□□ 2.52
SPHK1-202ENST00000392496 ANKRD30BQ9BXX2 1392 aa30.78■■■□□ 2.52
SPHK1-202ENST00000392496 TRAPPC8Q9Y2L5 1435 aa30.77■■■□□ 2.52
SPHK1-202ENST00000392496 DIP2BQ9P265 1576 aa30.73■■■□□ 2.51
SPHK1-202ENST00000392496 DUOX2Q9NRD8 1548 aa30.72■■■□□ 2.51
SPHK1-202ENST00000392496 RTEL1-TNFRSF6BF6WH68 1400 aa30.71■■■□□ 2.51
SPHK1-202ENST00000392496 GLI2P10070 1586 aa30.71■■■□□ 2.51
SPHK1-202ENST00000392496 NUP155O75694 1391 aa30.71■■■□□ 2.51
SPHK1-202ENST00000392496 FOXD1Q16676 465 aa30.71■■■□□ 2.51
SPHK1-202ENST00000392496 RPRD2Q5VT52 1461 aaKnown RBP30.68■■■□□ 2.5
SPHK1-202ENST00000392496 UNC13BO14795 1591 aa30.67■■■□□ 2.5
SPHK1-202ENST00000392496 ADGRL1O94910 1474 aa30.67■■■□□ 2.5
SPHK1-202ENST00000392496 ERBINQ96RT1 1412 aa30.66■■■□□ 2.5
SPHK1-202ENST00000392496 CFAP74Q9C0B2 1584 aa30.66■■■□□ 2.5
SPHK1-202ENST00000392496 CD109Q6YHK3 1445 aa30.65■■■□□ 2.5
SPHK1-202ENST00000392496 SPAG9O60271 1321 aaKnown RBP30.65■■■□□ 2.5
SPHK1-202ENST00000392496 ZFYVE16Q7Z3T8 1539 aa30.65■■■□□ 2.5
SPHK1-202ENST00000392496 PKD2Q13563 968 aa30.64■■■□□ 2.49
SPHK1-202ENST00000392496 KIF13AQ9H1H9 1805 aa30.63■■■□□ 2.49
SPHK1-202ENST00000392496 SCAPERQ9BY12 1400 aa30.62■■■□□ 2.49
SPHK1-202ENST00000392496 AFAP1Q8N556 730 aa30.61■■■□□ 2.49
SPHK1-202ENST00000392496 INO80Q9ULG1 1556 aaPredicted RBP30.6■■■□□ 2.49
SPHK1-202ENST00000392496 FAM135AQ9P2D6 1515 aa30.59■■■□□ 2.49
SPHK1-202ENST00000392496 MAP3K4Q9Y6R4 1608 aa30.57■■■□□ 2.48
SPHK1-202ENST00000392496 ATP7AQ04656 1500 aa30.57■■■□□ 2.48
SPHK1-202ENST00000392496 MAGI2Q86UL8 1455 aa30.56■■■□□ 2.48
SPHK1-202ENST00000392496 IQGAP3Q86VI3 1631 aa30.55■■■□□ 2.48
SPHK1-202ENST00000392496 TEX14Q8IWB6 1497 aa30.54■■■□□ 2.48
SPHK1-202ENST00000392496 L3MBTL2Q969R5 705 aa30.51■■■□□ 2.48
SPHK1-202ENST00000392496 ZNF518AQ6AHZ1 1483 aa30.51■■■□□ 2.47
SPHK1-202ENST00000392496 TSPOAP1O95153 1857 aa30.5■■■□□ 2.47
SPHK1-202ENST00000392496 NEO1Q92859 1461 aa30.49■■■□□ 2.47
SPHK1-202ENST00000392496 KDM5CP41229 1560 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms