RNA–Protein interactions for RNA: ENST00000392467.7

TMC6-203, Transcript of transmembrane channel like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC6, Length 2,833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-203ENST00000392467 MAGI3Q5TCQ9 1506 aa25.14■■□□□ 1.61
TMC6-203ENST00000392467 KDM5BQ9UGL1 1544 aa25.13■■□□□ 1.61
TMC6-203ENST00000392467 EIF4G2P78344 907 aaKnown RBP eCLIP25.13■■□□□ 1.618e-11■□□□□ 9.7
TMC6-203ENST00000392467 KIAA0556O60303 1618 aa25.13■■□□□ 1.61
TMC6-203ENST00000392467 MRS2Q9HD23 443 aa25.13■■□□□ 1.61
TMC6-203ENST00000392467 NCOA2Q15596 1464 aa25.13■■□□□ 1.61
TMC6-203ENST00000392467 EHBP1L1Q8N3D4 1523 aa25.13■■□□□ 1.61
TMC6-203ENST00000392467 PPP4R2Q9NY27 417 aa25.13■■□□□ 1.61
TMC6-203ENST00000392467 CEP170Q5SW79 1584 aa25.12■■□□□ 1.61
TMC6-203ENST00000392467 EPRSP07814 1512 aaKnown RBP25.1■■□□□ 1.61
TMC6-203ENST00000392467 FBLN2P98095 1184 aa25.09■■□□□ 1.61
TMC6-203ENST00000392467 SUPT6HQ7KZ85 1726 aaKnown RBP25.09■■□□□ 1.61
TMC6-203ENST00000392467 L3MBTL2Q969R5 705 aa25.08■■□□□ 1.6
TMC6-203ENST00000392467 MYOM3Q5VTT5 1437 aa25.07■■□□□ 1.6
TMC6-203ENST00000392467 CDK13Q14004 1512 aaKnown RBP25.06■■□□□ 1.6
TMC6-203ENST00000392467 PRKRIP1Q9H875 184 aaPredicted RBP25.05■■□□□ 1.6
TMC6-203ENST00000392467 ARHGEF11O15085 1522 aa25.05■■□□□ 1.6
TMC6-203ENST00000392467 NUP160Q12769 1436 aa25.03■■□□□ 1.6
TMC6-203ENST00000392467 CNTLNQ9NXG0 1405 aa25.02■■□□□ 1.6
TMC6-203ENST00000392467 POLR3GLQ9BT43 218 aa25.01■■□□□ 1.59
TMC6-203ENST00000392467 MPHOSPH9Q99550 1183 aa25■■□□□ 1.59
TMC6-203ENST00000392467 DENND4BO75064 1496 aaPredicted RBP24.99■■□□□ 1.59
TMC6-203ENST00000392467 NBR1Q14596 966 aa24.97■■□□□ 1.59
TMC6-203ENST00000392467 NUP153P49790 1475 aaKnown RBP24.96■■□□□ 1.59
TMC6-203ENST00000392467 NBPF8Q3BBV2 869 aa24.96■■□□□ 1.59
TMC6-203ENST00000392467 CCDC7Q96M83 1385 aa24.96■■□□□ 1.59
TMC6-203ENST00000392467 KDM6BO15054 1643 aa24.95■■□□□ 1.59
TMC6-203ENST00000392467 RAPGEF6Q8TEU7 1601 aa24.95■■□□□ 1.58
TMC6-203ENST00000392467 JPH4Q96JJ6 628 aa24.94■■□□□ 1.58
TMC6-203ENST00000392467 ZBED9Q6R2W3 1325 aa24.92■■□□□ 1.58
TMC6-203ENST00000392467 ERICH6BQ5W0A0 696 aa24.91■■□□□ 1.58
TMC6-203ENST00000392467 DEKP35659 375 aaKnown RBP24.9■■□□□ 1.58
TMC6-203ENST00000392467 PAK3O75914 559 aaPredicted RBP24.9■■□□□ 1.58
TMC6-203ENST00000392467 KIF7Q2M1P5 1343 aa24.89■■□□□ 1.57
TMC6-203ENST00000392467 AKNAQ7Z591 1439 aa24.88■■□□□ 1.57
TMC6-203ENST00000392467 PLB1Q6P1J6 1458 aa24.87■■□□□ 1.57
TMC6-203ENST00000392467 CARMIL2Q6F5E8 1435 aa24.87■■□□□ 1.57
TMC6-203ENST00000392467 TCOF1Q13428 1488 aaKnown RBP24.87■■□□□ 1.57
TMC6-203ENST00000392467 ZNF326Q5BKZ1 582 aaKnown RBP24.87■■□□□ 1.57
TMC6-203ENST00000392467 NCOA1Q15788 1441 aa24.87■■□□□ 1.57
TMC6-203ENST00000392467 NOP58Q9Y2X3 529 aaKnown RBP24.83■■□□□ 1.57
TMC6-203ENST00000392467 MIA2Q96PC5 1412 aa24.81■■□□□ 1.56
TMC6-203ENST00000392467 SLC4A1APQ9BWU0 796 aaKnown RBP24.79■■□□□ 1.56
TMC6-203ENST00000392467 CCDC136Q96JN2 1154 aa24.78■■□□□ 1.56
TMC6-203ENST00000392467 ZNF644Q9H582 1327 aaPredicted RBP24.77■■□□□ 1.56
TMC6-203ENST00000392467 PRG4Q92954 1404 aaPredicted RBP24.75■■□□□ 1.55
TMC6-203ENST00000392467 CHD1O14646 1710 aa24.75■■□□□ 1.55
TMC6-203ENST00000392467 TROQ12816 1431 aaPredicted RBP24.73■■□□□ 1.55
TMC6-203ENST00000392467 GCC2Q8IWJ2 1684 aa24.72■■□□□ 1.55
TMC6-203ENST00000392467 ANKRD30BQ9BXX2 1392 aa24.72■■□□□ 1.55
TMC6-203ENST00000392467 ABCA8O94911 1581 aa24.72■■□□□ 1.55
TMC6-203ENST00000392467 NUDCQ9Y266 331 aa24.69■■□□□ 1.54
TMC6-203ENST00000392467 RPRD2Q5VT52 1461 aaKnown RBP24.67■■□□□ 1.54
TMC6-203ENST00000392467 SPATA31E1Q6ZUB1 1445 aa24.66■■□□□ 1.54
TMC6-203ENST00000392467 SALL2Q9Y467 1007 aaPredicted RBP24.66■■□□□ 1.54
TMC6-203ENST00000392467 KIF14Q15058 1648 aa24.65■■□□□ 1.54
TMC6-203ENST00000392467 TEX14Q8IWB6 1497 aa24.65■■□□□ 1.54
TMC6-203ENST00000392467 ANP32AP39687 249 aaKnown RBP24.64■■□□□ 1.54
TMC6-203ENST00000392467 SMG6Q86US8 1419 aaKnown RBP24.64■■□□□ 1.53
TMC6-203ENST00000392467 ADCY10Q96PN6 1610 aa24.64■■□□□ 1.53
TMC6-203ENST00000392467 NPM2Q86SE8 214 aaKnown RBP24.63■■□□□ 1.53
TMC6-203ENST00000392467 ATP10BO94823 1461 aa24.63■■□□□ 1.53
TMC6-203ENST00000392467 DAPK1P53355 1430 aa24.62■■□□□ 1.53
TMC6-203ENST00000392467 DHX29Q7Z478 1369 aaKnown RBP24.61■■□□□ 1.53
TMC6-203ENST00000392467 MYT1LQ9UL68 1186 aa24.61■■□□□ 1.53
TMC6-203ENST00000392467 PTPRGP23470 1445 aa24.6■■□□□ 1.53
TMC6-203ENST00000392467 DNMT1P26358 1616 aaKnown RBP24.6■■□□□ 1.53
TMC6-203ENST00000392467 TMC1Q8TDI8 760 aa24.6■■□□□ 1.53
TMC6-203ENST00000392467 ABCC5O15440 1437 aa24.6■■□□□ 1.53
TMC6-203ENST00000392467 GPATCH8Q9UKJ3 1502 aaKnown RBP24.6■■□□□ 1.53
TMC6-203ENST00000392467 IPO9Q96P70 1041 aaKnown RBP24.59■■□□□ 1.53
TMC6-203ENST00000392467 SHROOM2Q13796 1616 aa24.58■■□□□ 1.53
TMC6-203ENST00000392467 ZBTB47Q9UFB7 747 aaPredicted RBP24.58■■□□□ 1.53
TMC6-203ENST00000392467 USP47Q96K76 1375 aa24.57■■□□□ 1.52
TMC6-203ENST00000392467 ZNF777Q9ULD5 760 aaPredicted RBP24.57■■□□□ 1.52
TMC6-203ENST00000392467 ITSN2Q9NZM3 1697 aa24.57■■□□□ 1.52
TMC6-203ENST00000392467 CFDP1Q9UEE9 299 aaPredicted RBP24.56■■□□□ 1.52
TMC6-203ENST00000392467 PLEKHD1A6NEE1 506 aa24.56■■□□□ 1.52
TMC6-203ENST00000392467 CAMSAP2Q08AD1 1489 aa24.55■■□□□ 1.52
TMC6-203ENST00000392467 ROCK1Q13464 1354 aa24.54■■□□□ 1.52
TMC6-203ENST00000392467 PNISRQ8TF01 805 aaKnown RBP24.53■■□□□ 1.52
TMC6-203ENST00000392467 RTL5Q5HYW3 569 aaPredicted RBP24.53■■□□□ 1.52
TMC6-203ENST00000392467 KDM2AQ9Y2K7 1162 aa24.51■■□□□ 1.51
TMC6-203ENST00000392467 ERCC6L2Q5T890 1561 aa24.51■■□□□ 1.51
TMC6-203ENST00000392467 PKD2Q13563 968 aa24.51■■□□□ 1.51
TMC6-203ENST00000392467 ABCC10Q5T3U5 1492 aa24.5■■□□□ 1.51
TMC6-203ENST00000392467 RNF123Q5XPI4 1314 aa24.5■■□□□ 1.51
TMC6-203ENST00000392467 EXOC6Q8TAG9 804 aa24.49■■□□□ 1.51
TMC6-203ENST00000392467 BCORL1Q5H9F3 1711 aa24.49■■□□□ 1.51
TMC6-203ENST00000392467 CDC42BPAQ5VT25 1732 aa24.47■■□□□ 1.51
TMC6-203ENST00000392467 LAS1LQ9Y4W2 734 aaKnown RBP24.47■■□□□ 1.51
TMC6-203ENST00000392467 CARD11Q9BXL7 1154 aa24.45■■□□□ 1.5
TMC6-203ENST00000392467 PZPP20742 1482 aa24.43■■□□□ 1.5
TMC6-203ENST00000392467 CLASP1Q7Z460 1538 aa24.43■■□□□ 1.5
TMC6-203ENST00000392467 SKAP1Q86WV1 359 aa24.42■■□□□ 1.5
TMC6-203ENST00000392467 ST20-MTHFSA0A0A6YYL1 179 aa24.41■■□□□ 1.5
TMC6-203ENST00000392467 CROCC2H7BZ55 1655 aa24.4■■□□□ 1.5
TMC6-203ENST00000392467 POLR1AO95602 1720 aaPredicted RBP24.4■■□□□ 1.5
TMC6-203ENST00000392467 RRP1P56182 461 aaKnown RBP24.39■■□□□ 1.5
TMC6-203ENST00000392467 RTN4Q9NQC3 1192 aaKnown RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms