RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 PLEKHD1A6NEE1 506 aa26.78■■□□□ 1.88
STRADB-202ENST00000392249 CAMSAP2Q08AD1 1489 aa26.78■■□□□ 1.88
STRADB-202ENST00000392249 MIER1Q8N108 512 aa26.77■■□□□ 1.88
STRADB-202ENST00000392249 ROCK1Q13464 1354 aa26.74■■□□□ 1.87
STRADB-202ENST00000392249 TRIM52Q96A61 297 aa26.73■■□□□ 1.87
STRADB-202ENST00000392249 ZNF777Q9ULD5 760 aaPredicted RBP26.71■■□□□ 1.87
STRADB-202ENST00000392249 CDC42BPAQ5VT25 1732 aa26.7■■□□□ 1.86
STRADB-202ENST00000392249 TONSLQ96HA7 1378 aa26.69■■□□□ 1.86
STRADB-202ENST00000392249 ABCC10Q5T3U5 1492 aa26.69■■□□□ 1.86
STRADB-202ENST00000392249 ERCC6L2Q5T890 1561 aa26.69■■□□□ 1.86
STRADB-202ENST00000392249 DENND4BO75064 1496 aaPredicted RBP26.68■■□□□ 1.86
STRADB-202ENST00000392249 PPP1R15AO75807 674 aaPredicted RBP26.67■■□□□ 1.86
STRADB-202ENST00000392249 CROCC2H7BZ55 1655 aa26.63■■□□□ 1.85
STRADB-202ENST00000392249 ADGBQ8N7X0 1667 aa26.62■■□□□ 1.85
STRADB-202ENST00000392249 MPHOSPH9Q99550 1183 aa26.61■■□□□ 1.85
STRADB-202ENST00000392249 CLASP1Q7Z460 1538 aa26.6■■□□□ 1.85
STRADB-202ENST00000392249 NCOA1Q15788 1441 aa26.58■■□□□ 1.85
STRADB-202ENST00000392249 ADGRL2O95490 1459 aa26.55■■□□□ 1.84
STRADB-202ENST00000392249 CENPBP07199 599 aaPredicted RBP26.55■■□□□ 1.84
STRADB-202ENST00000392249 ABCC2Q92887 1545 aa26.55■■□□□ 1.84
STRADB-202ENST00000392249 ACIN1Q9UKV3 1341 aaKnown RBP26.53■■□□□ 1.84
STRADB-202ENST00000392249 FOXD1Q16676 465 aa26.53■■□□□ 1.84
STRADB-202ENST00000392249 YTHDC1Q96MU7 727 aaKnown RBP26.52■■□□□ 1.84
STRADB-202ENST00000392249 KDM5BQ9UGL1 1544 aa26.51■■□□□ 1.84
STRADB-202ENST00000392249 ANKRD30AQ9BXX3 1397 aa26.5■■□□□ 1.83
STRADB-202ENST00000392249 PREX2Q70Z35 1606 aa26.49■■□□□ 1.83
STRADB-202ENST00000392249 CDC42BPBQ9Y5S2 1711 aa26.48■■□□□ 1.83
STRADB-202ENST00000392249 SHANK2Q9UPX8 1470 aa26.47■■□□□ 1.83
STRADB-202ENST00000392249 SLC4A1APQ9BWU0 796 aaKnown RBP26.46■■□□□ 1.83
STRADB-202ENST00000392249 SCAF1Q9H7N4 1312 aaKnown RBP26.46■■□□□ 1.83
STRADB-202ENST00000392249 C9orf84Q5VXU9 1444 aa26.46■■□□□ 1.83
STRADB-202ENST00000392249 HIRIP3Q9BW71 556 aaPredicted RBP26.45■■□□□ 1.82
STRADB-202ENST00000392249 TTC37Q6PGP7 1564 aa26.45■■□□□ 1.82
STRADB-202ENST00000392249 SAMD9LQ8IVG5 1584 aa26.44■■□□□ 1.82
STRADB-202ENST00000392249 HNRNPMP52272 730 aaKnown RBP eCLIP26.43■■□□□ 1.82
STRADB-202ENST00000392249 ANKRD30BQ9BXX2 1392 aa26.43■■□□□ 1.82
STRADB-202ENST00000392249 PZPP20742 1482 aa26.43■■□□□ 1.82
STRADB-202ENST00000392249 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.42■■□□□ 1.82
STRADB-202ENST00000392249 ARHGEF5Q12774 1597 aa26.42■■□□□ 1.82
STRADB-202ENST00000392249 ANKRD50Q9ULJ7 1429 aa26.41■■□□□ 1.82
STRADB-202ENST00000392249 TSPY4P0CV99 314 aa26.41■■□□□ 1.82
STRADB-202ENST00000392249 TSPY10P0CW01 314 aa26.41■■□□□ 1.82
STRADB-202ENST00000392249 MBD5Q9P267 1494 aa26.41■■□□□ 1.82
STRADB-202ENST00000392249 ZCCHC11Q5TAX3 1644 aaKnown RBP26.39■■□□□ 1.82
STRADB-202ENST00000392249 ARHGAP5Q13017 1502 aa26.37■■□□□ 1.81
STRADB-202ENST00000392249 UHRF1BP1LA0JNW5 1464 aa26.36■■□□□ 1.81
STRADB-202ENST00000392249 RPRD2Q5VT52 1461 aaKnown RBP26.36■■□□□ 1.81
STRADB-202ENST00000392249 CCDC141Q6ZP82 1450 aa26.36■■□□□ 1.81
STRADB-202ENST00000392249 DDX10Q13206 875 aaKnown RBP26.35■■□□□ 1.81
STRADB-202ENST00000392249 KCNH8Q96L42 1107 aa26.35■■□□□ 1.81
STRADB-202ENST00000392249 MYO5CQ9NQX4 1742 aa26.35■■□□□ 1.81
STRADB-202ENST00000392249 L3MBTL2Q969R5 705 aa26.34■■□□□ 1.81
STRADB-202ENST00000392249 SYCP2Q9BX26 1530 aa26.33■■□□□ 1.81
STRADB-202ENST00000392249 KIF15Q9NS87 1388 aa26.33■■□□□ 1.8
STRADB-202ENST00000392249 KIAA1107Q9UPP5 1409 aa26.29■■□□□ 1.8
STRADB-202ENST00000392249 TEX14Q8IWB6 1497 aa26.28■■□□□ 1.8
STRADB-202ENST00000392249 RSPH4AQ5TD94 716 aa26.27■■□□□ 1.8
STRADB-202ENST00000392249 PKD2Q13563 968 aa26.27■■□□□ 1.8
STRADB-202ENST00000392249 NUP155O75694 1391 aa26.26■■□□□ 1.79
STRADB-202ENST00000392249 KDM5DQ9BY66 1539 aa26.22■■□□□ 1.79
STRADB-202ENST00000392249 PLEKHH2Q8IVE3 1493 aa26.21■■□□□ 1.79
STRADB-202ENST00000392249 MAST1Q9Y2H9 1570 aa26.2■■□□□ 1.79
STRADB-202ENST00000392249 PLCH2O75038 1416 aa26.2■■□□□ 1.79
STRADB-202ENST00000392249 HSPA5P11021 654 aaKnown RBP26.17■■□□□ 1.78
STRADB-202ENST00000392249 GTF3C3Q9Y5Q9 886 aa26.17■■□□□ 1.78
STRADB-202ENST00000392249 ARHGEF12Q9NZN5 1544 aa26.17■■□□□ 1.78
STRADB-202ENST00000392249 NBPF8Q3BBV2 869 aa26.17■■□□□ 1.78
STRADB-202ENST00000392249 EIF4G2P78344 907 aaKnown RBP eCLIP26.14■■□□□ 1.78
STRADB-202ENST00000392249 EFCAB2Q5VUJ9 269 aa26.14■■□□□ 1.77
STRADB-202ENST00000392249 PLXNC1O60486 1568 aa26.12■■□□□ 1.77
STRADB-202ENST00000392249 ABCC1P33527 1531 aa26.11■■□□□ 1.77
STRADB-202ENST00000392249 WDR7Q9Y4E6 1490 aa26.11■■□□□ 1.77
STRADB-202ENST00000392249 FAM135AQ9P2D6 1515 aa26.09■■□□□ 1.77
STRADB-202ENST00000392249 OSCARQ8IYS5 282 aa26.07■■□□□ 1.76
STRADB-202ENST00000392249 UNC13BO14795 1591 aa26.06■■□□□ 1.76
STRADB-202ENST00000392249 WASHC2AQ641Q2 1341 aa26.05■■□□□ 1.76
STRADB-202ENST00000392249 TRAPPC8Q9Y2L5 1435 aa26.05■■□□□ 1.76
STRADB-202ENST00000392249 ARAP3Q8WWN8 1544 aa26.04■■□□□ 1.76
STRADB-202ENST00000392249 ANP32CO43423 234 aa26.04■■□□□ 1.76
STRADB-202ENST00000392249 DUOX2Q9NRD8 1548 aa26.03■■□□□ 1.76
STRADB-202ENST00000392249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.01■■□□□ 1.75
STRADB-202ENST00000392249 ZNF326Q5BKZ1 582 aaKnown RBP26■■□□□ 1.75
STRADB-202ENST00000392249 ABCA9Q8IUA7 1624 aa25.99■■□□□ 1.75
STRADB-202ENST00000392249 ASXL2Q76L83 1435 aa25.98■■□□□ 1.75
STRADB-202ENST00000392249 ERBINQ96RT1 1412 aa25.97■■□□□ 1.75
STRADB-202ENST00000392249 SPATA31E1Q6ZUB1 1445 aa25.97■■□□□ 1.75
STRADB-202ENST00000392249 IQGAP3Q86VI3 1631 aa25.96■■□□□ 1.75
STRADB-202ENST00000392249 FANCAO15360 1455 aa25.95■■□□□ 1.75
STRADB-202ENST00000392249 AFAP1Q8N556 730 aa25.95■■□□□ 1.74
STRADB-202ENST00000392249 C11orf95C9JLR9 678 aaPredicted RBP25.94■■□□□ 1.74
STRADB-202ENST00000392249 SPAG9O60271 1321 aaKnown RBP25.94■■□□□ 1.74
STRADB-202ENST00000392249 CCER2I3L3R5 266 aa25.93■■□□□ 1.74
STRADB-202ENST00000392249 MAGI2Q86UL8 1455 aa25.92■■□□□ 1.74
STRADB-202ENST00000392249 ZFYVE16Q7Z3T8 1539 aa25.92■■□□□ 1.74
STRADB-202ENST00000392249 CCDC7Q96M83 1385 aa25.91■■□□□ 1.74
STRADB-202ENST00000392249 UHRF1BP1Q6BDS2 1440 aa25.91■■□□□ 1.74
STRADB-202ENST00000392249 CCDC144AA2RUR9 1427 aa25.9■■□□□ 1.74
STRADB-202ENST00000392249 RTEL1-TNFRSF6BF6WH68 1400 aa25.89■■□□□ 1.74
STRADB-202ENST00000392249 KDM2AQ9Y2K7 1162 aa25.88■■□□□ 1.73
STRADB-202ENST00000392249 PLA2R1Q13018 1463 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms