RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 ZNF608Q9ULD9 1512 aaPredicted RBP28.89■■■□□ 2.22
COL23A1-201ENST00000390654 EPRSP07814 1512 aaKnown RBP28.89■■■□□ 2.21
COL23A1-201ENST00000390654 CNTLNQ9NXG0 1405 aa28.86■■■□□ 2.21
COL23A1-201ENST00000390654 CCDC7Q96M83 1385 aa28.86■■■□□ 2.21
COL23A1-201ENST00000390654 THOC2Q8NI27 1593 aaKnown RBP28.84■■■□□ 2.21
COL23A1-201ENST00000390654 TARBP1Q13395 1621 aaKnown RBP28.83■■■□□ 2.21
COL23A1-201ENST00000390654 IQGAP2Q13576 1575 aa28.81■■■□□ 2.2
COL23A1-201ENST00000390654 KIF7Q2M1P5 1343 aa28.8■■■□□ 2.2
COL23A1-201ENST00000390654 ARHGEF11O15085 1522 aa28.8■■■□□ 2.2
COL23A1-201ENST00000390654 ERICH6Q7L0X2 663 aa28.77■■■□□ 2.2
COL23A1-201ENST00000390654 TCOF1Q13428 1488 aaKnown RBP28.77■■■□□ 2.2
COL23A1-201ENST00000390654 PPP4R2Q9NY27 417 aa28.76■■■□□ 2.19
COL23A1-201ENST00000390654 CHMP7Q8WUX9 453 aaPredicted RBP28.75■■■□□ 2.19
COL23A1-201ENST00000390654 HECW1Q76N89 1606 aa28.74■■■□□ 2.19
COL23A1-201ENST00000390654 ANKRD30BQ9BXX2 1392 aa28.74■■■□□ 2.19
COL23A1-201ENST00000390654 NCOA1Q15788 1441 aa28.73■■■□□ 2.19
COL23A1-201ENST00000390654 CFDP1Q9UEE9 299 aaPredicted RBP28.73■■■□□ 2.19
COL23A1-201ENST00000390654 PBRM1Q86U86 1689 aa28.71■■■□□ 2.19
COL23A1-201ENST00000390654 BCL11AQ9H165 835 aa28.7■■■□□ 2.18
COL23A1-201ENST00000390654 GCC2Q8IWJ2 1684 aa28.69■■■□□ 2.18
COL23A1-201ENST00000390654 DAPK1P53355 1430 aa28.68■■■□□ 2.18
COL23A1-201ENST00000390654 PRG4Q92954 1404 aaPredicted RBP28.67■■■□□ 2.18
COL23A1-201ENST00000390654 MIA2Q96PC5 1412 aa28.67■■■□□ 2.18
COL23A1-201ENST00000390654 ABCC5O15440 1437 aa28.67■■■□□ 2.18
COL23A1-201ENST00000390654 MRC2Q9UBG0 1479 aa28.67■■■□□ 2.18
COL23A1-201ENST00000390654 ADAMTS12P58397 1594 aa28.66■■■□□ 2.18
COL23A1-201ENST00000390654 ZBED9Q6R2W3 1325 aa28.65■■■□□ 2.18
COL23A1-201ENST00000390654 WDR62O43379 1518 aa28.64■■■□□ 2.17
COL23A1-201ENST00000390654 RPRD2Q5VT52 1461 aaKnown RBP28.63■■■□□ 2.17
COL23A1-201ENST00000390654 AKNAQ7Z591 1439 aa28.6■■■□□ 2.17
COL23A1-201ENST00000390654 PKD2Q13563 968 aa28.6■■■□□ 2.17
COL23A1-201ENST00000390654 FANCIQ9NVI1 1328 aa28.6■■■□□ 2.17
COL23A1-201ENST00000390654 KDM2AQ9Y2K7 1162 aa28.59■■■□□ 2.17
COL23A1-201ENST00000390654 TEX14Q8IWB6 1497 aa28.58■■■□□ 2.17
COL23A1-201ENST00000390654 NUP153P49790 1475 aaKnown RBP28.57■■■□□ 2.16
COL23A1-201ENST00000390654 PLB1Q6P1J6 1458 aa28.57■■■□□ 2.16
COL23A1-201ENST00000390654 DISP1Q96F81 1524 aa28.55■■■□□ 2.16
COL23A1-201ENST00000390654 SPATA31E1Q6ZUB1 1445 aa28.53■■■□□ 2.16
COL23A1-201ENST00000390654 SALL2Q9Y467 1007 aaPredicted RBP28.53■■■□□ 2.16
COL23A1-201ENST00000390654 ERCC6Q03468 1493 aa28.53■■■□□ 2.16
COL23A1-201ENST00000390654 USP47Q96K76 1375 aa28.51■■■□□ 2.15
COL23A1-201ENST00000390654 ROCK1Q13464 1354 aa28.5■■■□□ 2.15
COL23A1-201ENST00000390654 KIAA0586Q9BVV6 1533 aa28.5■■■□□ 2.15
COL23A1-201ENST00000390654 ERICH6BQ5W0A0 696 aa28.49■■■□□ 2.15
COL23A1-201ENST00000390654 JPH4Q96JJ6 628 aa28.49■■■□□ 2.15
COL23A1-201ENST00000390654 IFT140Q96RY7 1462 aa28.47■■■□□ 2.15
COL23A1-201ENST00000390654 GRIN2AQ12879 1464 aa28.46■■■□□ 2.15
COL23A1-201ENST00000390654 TMC1Q8TDI8 760 aa28.46■■■□□ 2.15
COL23A1-201ENST00000390654 KIAA0556O60303 1618 aa28.45■■■□□ 2.15
COL23A1-201ENST00000390654 CCDC136Q96JN2 1154 aa28.44■■■□□ 2.14
COL23A1-201ENST00000390654 CARD11Q9BXL7 1154 aa28.44■■■□□ 2.14
COL23A1-201ENST00000390654 PZPP20742 1482 aa28.43■■■□□ 2.14
COL23A1-201ENST00000390654 DHX29Q7Z478 1369 aaKnown RBP28.43■■■□□ 2.14
COL23A1-201ENST00000390654 HNRNPMP52272 730 aaKnown RBP eCLIP28.42■■■□□ 2.14
COL23A1-201ENST00000390654 PLEKHD1A6NEE1 506 aa28.42■■■□□ 2.14
COL23A1-201ENST00000390654 DNMT1P26358 1616 aaKnown RBP28.41■■■□□ 2.14
COL23A1-201ENST00000390654 NUDCQ9Y266 331 aa28.4■■■□□ 2.14
COL23A1-201ENST00000390654 NBR1Q14596 966 aa28.4■■■□□ 2.14
COL23A1-201ENST00000390654 CAMSAP2Q08AD1 1489 aa28.39■■■□□ 2.13
COL23A1-201ENST00000390654 RAPGEF6Q8TEU7 1601 aa28.38■■■□□ 2.13
COL23A1-201ENST00000390654 ST20-MTHFSA0A0A6YYL1 179 aa28.37■■■□□ 2.13
COL23A1-201ENST00000390654 TROQ12816 1431 aaPredicted RBP28.37■■■□□ 2.13
COL23A1-201ENST00000390654 DCAF11Q8TEB1 546 aa28.36■■■□□ 2.13
COL23A1-201ENST00000390654 NUP155O75694 1391 aa28.36■■■□□ 2.13
COL23A1-201ENST00000390654 EIF4G3O43432 1585 aaKnown RBP28.35■■■□□ 2.13
COL23A1-201ENST00000390654 PAK3O75914 559 aaPredicted RBP28.34■■■□□ 2.13
COL23A1-201ENST00000390654 KIAA1107Q9UPP5 1409 aa28.34■■■□□ 2.13
COL23A1-201ENST00000390654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.34■■■□□ 2.13
COL23A1-201ENST00000390654 RGL3Q3MIN7 710 aa28.33■■■□□ 2.13
COL23A1-201ENST00000390654 KIF14Q15058 1648 aa28.33■■■□□ 2.13
COL23A1-201ENST00000390654 PNISRQ8TF01 805 aaKnown RBP28.33■■■□□ 2.13
COL23A1-201ENST00000390654 BCORL1Q5H9F3 1711 aa28.33■■■□□ 2.13
COL23A1-201ENST00000390654 GPATCH8Q9UKJ3 1502 aaKnown RBP28.32■■■□□ 2.12
COL23A1-201ENST00000390654 TSPY4P0CV99 314 aa28.32■■■□□ 2.12
COL23A1-201ENST00000390654 TSPY10P0CW01 314 aa28.32■■■□□ 2.12
COL23A1-201ENST00000390654 SMG6Q86US8 1419 aaKnown RBP28.3■■■□□ 2.12
COL23A1-201ENST00000390654 ANKRD50Q9ULJ7 1429 aa28.28■■■□□ 2.12
COL23A1-201ENST00000390654 ANKRD30AQ9BXX3 1397 aa28.28■■■□□ 2.12
COL23A1-201ENST00000390654 NOP58Q9Y2X3 529 aaKnown RBP28.24■■■□□ 2.11
COL23A1-201ENST00000390654 CEP170Q5SW79 1584 aa28.24■■■□□ 2.11
COL23A1-201ENST00000390654 CARMIL2Q6F5E8 1435 aa28.24■■■□□ 2.11
COL23A1-201ENST00000390654 NPM2Q86SE8 214 aaKnown RBP28.2■■■□□ 2.11
COL23A1-201ENST00000390654 MBD5Q9P267 1494 aa28.2■■■□□ 2.1
COL23A1-201ENST00000390654 SYNJ2O15056 1496 aa28.16■■■□□ 2.1
COL23A1-201ENST00000390654 EXOC6Q8TAG9 804 aa28.16■■■□□ 2.1
COL23A1-201ENST00000390654 DEKP35659 375 aaKnown RBP28.16■■■□□ 2.1
COL23A1-201ENST00000390654 NBPF1Q3BBV0 1214 aa28.14■■■□□ 2.09
COL23A1-201ENST00000390654 C9orf84Q5VXU9 1444 aa28.14■■■□□ 2.09
COL23A1-201ENST00000390654 CC2D1BQ5T0F9 858 aaKnown RBP28.13■■■□□ 2.09
COL23A1-201ENST00000390654 ROCK2O75116 1388 aaKnown RBP28.13■■■□□ 2.09
COL23A1-201ENST00000390654 KIF15Q9NS87 1388 aa28.13■■■□□ 2.09
COL23A1-201ENST00000390654 KDM5CP41229 1560 aa28.13■■■□□ 2.09
COL23A1-201ENST00000390654 ANP32AP39687 249 aaKnown RBP28.12■■■□□ 2.09
COL23A1-201ENST00000390654 RNF123Q5XPI4 1314 aa28.11■■■□□ 2.09
COL23A1-201ENST00000390654 CDCA7LQ96GN5 454 aa28.11■■■□□ 2.09
COL23A1-201ENST00000390654 POLR1AO95602 1720 aaPredicted RBP28.11■■■□□ 2.09
COL23A1-201ENST00000390654 ATP10BO94823 1461 aa28.1■■■□□ 2.09
COL23A1-201ENST00000390654 MYBBP1AQ9BQG0 1328 aaKnown RBP28.1■■■□□ 2.09
COL23A1-201ENST00000390654 MAGI1Q96QZ7 1491 aaPredicted RBP28.1■■■□□ 2.09
COL23A1-201ENST00000390654 PLIN1O60240 522 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms