RNA–Protein interactions for RNA: ENST00000390428.3

TRAV6-201, Transcript of T cell receptor alpha variable 6, humanhuman

APPRIS P1 BASIC

Gene TRAV6, Length 404 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6-201ENST00000390428 CTTNBP2Q8WZ74 1663 aa13.24□□□□□ -0.29
TRAV6-201ENST00000390428 KDM4FA0A1W2PPD8 638 aa13.24□□□□□ -0.29
TRAV6-201ENST00000390428 ZCCHC11Q5TAX3 1644 aaKnown RBP13.24□□□□□ -0.29
TRAV6-201ENST00000390428 MAP3K4Q9Y6R4 1608 aa13.22□□□□□ -0.29
TRAV6-201ENST00000390428 EPRSP07814 1512 aaKnown RBP13.22□□□□□ -0.29
TRAV6-201ENST00000390428 HAX1O00165 279 aa13.21□□□□□ -0.29
TRAV6-201ENST00000390428 CREBZFQ9NS37 354 aa13.21□□□□□ -0.29
TRAV6-201ENST00000390428 COL17A1Q9UMD9 1497 aaPredicted RBP13.17□□□□□ -0.3
TRAV6-201ENST00000390428 FARP1Q9Y4F1 1045 aaPredicted RBP13.17□□□□□ -0.3
TRAV6-201ENST00000390428 GOLGA3Q08378 1498 aa13.16□□□□□ -0.3
TRAV6-201ENST00000390428 TEX14Q8IWB6 1497 aa13.16□□□□□ -0.3
TRAV6-201ENST00000390428 PRXQ9BXM0 1461 aa13.16□□□□□ -0.3
TRAV6-201ENST00000390428 WDR7Q9Y4E6 1490 aa13.16□□□□□ -0.3
TRAV6-201ENST00000390428 ABCA8O94911 1581 aa13.15□□□□□ -0.3
TRAV6-201ENST00000390428 EVX2Q03828 476 aa13.14□□□□□ -0.31
TRAV6-201ENST00000390428 ADGRL1O94910 1474 aa13.12□□□□□ -0.31
TRAV6-201ENST00000390428 C19orf67A6NJJ6 358 aa13.12□□□□□ -0.31
TRAV6-201ENST00000390428 CFAP43Q8NDM7 1665 aa13.12□□□□□ -0.31
TRAV6-201ENST00000390428 MAGI3Q5TCQ9 1506 aa13.09□□□□□ -0.31
TRAV6-201ENST00000390428 CD109Q6YHK3 1445 aa13.08□□□□□ -0.32
TRAV6-201ENST00000390428 SP7Q8TDD2 431 aaPredicted RBP13.08□□□□□ -0.32
TRAV6-201ENST00000390428 KCNH8Q96L42 1107 aa13.07□□□□□ -0.32
TRAV6-201ENST00000390428 MNX1P50219 401 aaPredicted RBP13.05□□□□□ -0.32
TRAV6-201ENST00000390428 P3H3Q8IVL6 736 aa13.03□□□□□ -0.32
TRAV6-201ENST00000390428 FAM9AQ8IZU1 332 aaPredicted RBP13.03□□□□□ -0.32
TRAV6-201ENST00000390428 ATP10BO94823 1461 aa13.03□□□□□ -0.32
TRAV6-201ENST00000390428 SAMD9Q5K651 1589 aa13.03□□□□□ -0.32
TRAV6-201ENST00000390428 ARID3CA6NKF2 412 aa13.01□□□□□ -0.33
TRAV6-201ENST00000390428 ABCA9Q8IUA7 1624 aa12.99□□□□□ -0.33
TRAV6-201ENST00000390428 RAPGEF6Q8TEU7 1601 aa12.99□□□□□ -0.33
TRAV6-201ENST00000390428 ARAP3Q8WWN8 1544 aa12.98□□□□□ -0.33
TRAV6-201ENST00000390428 CD44P16070 742 aaKnown RBP12.98□□□□□ -0.33
TRAV6-201ENST00000390428 MIER1Q8N108 512 aa12.98□□□□□ -0.33
TRAV6-201ENST00000390428 KIF21BO75037 1637 aa12.98□□□□□ -0.33
TRAV6-201ENST00000390428 HECW2Q9P2P5 1572 aa12.97□□□□□ -0.33
TRAV6-201ENST00000390428 EEA1Q15075 1411 aa12.96□□□□□ -0.33
TRAV6-201ENST00000390428 PHLDB1Q86UU1 1377 aa12.94□□□□□ -0.34
TRAV6-201ENST00000390428 FBXO3Q9UK99 471 aa12.94□□□□□ -0.34
TRAV6-201ENST00000390428 NUP153P49790 1475 aaKnown RBP12.93□□□□□ -0.34
TRAV6-201ENST00000390428 NEO1Q92859 1461 aa12.91□□□□□ -0.34
TRAV6-201ENST00000390428 FHOD3Q2V2M9 1422 aa12.91□□□□□ -0.34
TRAV6-201ENST00000390428 RANGAP1P46060 587 aaPredicted RBP12.91□□□□□ -0.34
TRAV6-201ENST00000390428 PLEKHG5O94827 1062 aa12.9□□□□□ -0.34
TRAV6-201ENST00000390428 ILDR1Q86SU0 546 aaPredicted RBP12.9□□□□□ -0.34
TRAV6-201ENST00000390428 PLCD3Q8N3E9 789 aa12.9□□□□□ -0.34
TRAV6-201ENST00000390428 RAPGEF3O95398 923 aa12.89□□□□□ -0.35
TRAV6-201ENST00000390428 ADAMTSL3P82987 1691 aa12.89□□□□□ -0.35
TRAV6-201ENST00000390428 FRMPD1Q5SYB0 1578 aa12.88□□□□□ -0.35
TRAV6-201ENST00000390428 PLEKHD1A6NEE1 506 aa12.87□□□□□ -0.35
TRAV6-201ENST00000390428 EFCAB5A4FU69 1503 aa12.87□□□□□ -0.35
TRAV6-201ENST00000390428 ZRANB1Q9UGI0 708 aa12.86□□□□□ -0.35
TRAV6-201ENST00000390428 RICTORQ6R327 1708 aa12.85□□□□□ -0.35
TRAV6-201ENST00000390428 BCORL1Q5H9F3 1711 aa12.85□□□□□ -0.35
TRAV6-201ENST00000390428 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRAV6-201ENST00000390428 GABBR2O75899 941 aa12.84□□□□□ -0.35
TRAV6-201ENST00000390428 PTPRMP28827 1452 aa12.84□□□□□ -0.35
TRAV6-201ENST00000390428 CFAP74Q9C0B2 1584 aa12.83□□□□□ -0.36
TRAV6-201ENST00000390428 TTC37Q6PGP7 1564 aa12.82□□□□□ -0.36
TRAV6-201ENST00000390428 AKNAQ7Z591 1439 aa12.82□□□□□ -0.36
TRAV6-201ENST00000390428 FANCAO15360 1455 aa12.82□□□□□ -0.36
TRAV6-201ENST00000390428 DENND4BO75064 1496 aaPredicted RBP12.82□□□□□ -0.36
TRAV6-201ENST00000390428 MADDQ8WXG6 1647 aa12.81□□□□□ -0.36
TRAV6-201ENST00000390428 ARHGEF40Q8TER5 1519 aa12.81□□□□□ -0.36
TRAV6-201ENST00000390428 ARID4BQ4LE39 1312 aaPredicted RBP12.81□□□□□ -0.36
TRAV6-201ENST00000390428 CDK13Q14004 1512 aaKnown RBP12.8□□□□□ -0.36
TRAV6-201ENST00000390428 ZNF579Q8NAF0 562 aaKnown RBP12.8□□□□□ -0.36
TRAV6-201ENST00000390428 PAK3O75914 559 aaPredicted RBP12.79□□□□□ -0.36
TRAV6-201ENST00000390428 VASPP50552 380 aaPredicted RBP12.79□□□□□ -0.36
TRAV6-201ENST00000390428 ZBTB47Q9UFB7 747 aaPredicted RBP12.78□□□□□ -0.36
TRAV6-201ENST00000390428 ZMYM4Q5VZL5 1548 aa12.78□□□□□ -0.36
TRAV6-201ENST00000390428 RIMS1Q86UR5 1692 aaKnown RBP12.77□□□□□ -0.36
TRAV6-201ENST00000390428 UBTFP17480 764 aaKnown RBP12.76□□□□□ -0.37
TRAV6-201ENST00000390428 HECW1Q76N89 1606 aa12.76□□□□□ -0.37
TRAV6-201ENST00000390428 PLCH2O75038 1416 aa12.75□□□□□ -0.37
TRAV6-201ENST00000390428 FMN1Q68DA7 1419 aa12.75□□□□□ -0.37
TRAV6-201ENST00000390428 ZFYVE16Q7Z3T8 1539 aa12.75□□□□□ -0.37
TRAV6-201ENST00000390428 SIGLEC1Q9BZZ2 1709 aa12.75□□□□□ -0.37
TRAV6-201ENST00000390428 ARHGAP35Q9NRY4 1499 aa12.75□□□□□ -0.37
TRAV6-201ENST00000390428 MYO5CQ9NQX4 1742 aa12.74□□□□□ -0.37
TRAV6-201ENST00000390428 PCF11O94913 1555 aaKnown RBP12.74□□□□□ -0.37
TRAV6-201ENST00000390428 MAGI2Q86UL8 1455 aa12.74□□□□□ -0.37
TRAV6-201ENST00000390428 YEATS2Q9ULM3 1422 aa12.74□□□□□ -0.37
TRAV6-201ENST00000390428 CLCN6P51797 869 aa12.73□□□□□ -0.37
TRAV6-201ENST00000390428 RASEFQ8IZ41 740 aa12.73□□□□□ -0.37
TRAV6-201ENST00000390428 TSPYL2Q9H2G4 693 aaPredicted RBP12.73□□□□□ -0.37
TRAV6-201ENST00000390428 LMTK3Q96Q04 1460 aa12.72□□□□□ -0.37
TRAV6-201ENST00000390428 POGZQ7Z3K3 1410 aa12.72□□□□□ -0.37
TRAV6-201ENST00000390428 SCAPERQ9BY12 1400 aa12.72□□□□□ -0.37
TRAV6-201ENST00000390428 NUBP1P53384 320 aa12.72□□□□□ -0.37
TRAV6-201ENST00000390428 ATP1B4Q9UN42 357 aaPredicted RBP12.72□□□□□ -0.37
TRAV6-201ENST00000390428 LRRIQ1Q96JM4 1722 aa12.71□□□□□ -0.37
TRAV6-201ENST00000390428 PHF12Q96QT6 1004 aa12.71□□□□□ -0.37
TRAV6-201ENST00000390428 KIF14Q15058 1648 aa12.7□□□□□ -0.38
TRAV6-201ENST00000390428 CDK11AQ9UQ88 783 aaPredicted RBP12.7□□□□□ -0.38
TRAV6-201ENST00000390428 FER1L4A9Z1Z3 1794 aa12.7□□□□□ -0.38
TRAV6-201ENST00000390428 EFCAB2Q5VUJ9 269 aa12.69□□□□□ -0.38
TRAV6-201ENST00000390428 CCDC61Q9Y6R9 512 aa12.68□□□□□ -0.38
TRAV6-201ENST00000390428 TROQ12816 1431 aaPredicted RBP12.68□□□□□ -0.38
TRAV6-201ENST00000390428 ATP10AO60312 1499 aa12.67□□□□□ -0.38
TRAV6-201ENST00000390428 FBXO41Q8TF61 875 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms