RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 CFDP1Q9UEE9 299 aaPredicted RBP26.45■■□□□ 1.82
ACTN4-202ENST00000390009 CDC42BPAQ5VT25 1732 aa26.44■■□□□ 1.82
ACTN4-202ENST00000390009 KDM6BO15054 1643 aa26.43■■□□□ 1.82
ACTN4-202ENST00000390009 ROCK1Q13464 1354 aa26.42■■□□□ 1.82
ACTN4-202ENST00000390009 ABCC10Q5T3U5 1492 aa26.42■■□□□ 1.82
ACTN4-202ENST00000390009 NEUROD1Q13562 356 aa26.41■■□□□ 1.82
ACTN4-202ENST00000390009 TIMELESSQ9UNS1 1208 aa26.38■■□□□ 1.81
ACTN4-202ENST00000390009 CROCC2H7BZ55 1655 aa26.36■■□□□ 1.81
ACTN4-202ENST00000390009 ABCC2Q92887 1545 aa26.35■■□□□ 1.81
ACTN4-202ENST00000390009 ADGBQ8N7X0 1667 aa26.34■■□□□ 1.81
ACTN4-202ENST00000390009 ZNF777Q9ULD5 760 aaPredicted RBP26.34■■□□□ 1.81
ACTN4-202ENST00000390009 TRIM52Q96A61 297 aa26.29■■□□□ 1.8
ACTN4-202ENST00000390009 DENND4BO75064 1496 aaPredicted RBP26.28■■□□□ 1.8
ACTN4-202ENST00000390009 ADGRL2O95490 1459 aa26.26■■□□□ 1.79
ACTN4-202ENST00000390009 ACIN1Q9UKV3 1341 aaKnown RBP26.26■■□□□ 1.79
ACTN4-202ENST00000390009 PREX2Q70Z35 1606 aa26.25■■□□□ 1.79
ACTN4-202ENST00000390009 CDC42BPBQ9Y5S2 1711 aa26.25■■□□□ 1.79
ACTN4-202ENST00000390009 NCOA1Q15788 1441 aa26.24■■□□□ 1.79
ACTN4-202ENST00000390009 TONSLQ96HA7 1378 aa26.23■■□□□ 1.79
ACTN4-202ENST00000390009 PPP1R15AO75807 674 aaPredicted RBP26.21■■□□□ 1.79
ACTN4-202ENST00000390009 MPHOSPH9Q99550 1183 aa26.21■■□□□ 1.79
ACTN4-202ENST00000390009 UHRF1BP1LA0JNW5 1464 aa26.21■■□□□ 1.79
ACTN4-202ENST00000390009 ZCCHC11Q5TAX3 1644 aaKnown RBP26.2■■□□□ 1.78
ACTN4-202ENST00000390009 SHANK2Q9UPX8 1470 aa26.2■■□□□ 1.78
ACTN4-202ENST00000390009 TTC37Q6PGP7 1564 aa26.19■■□□□ 1.78
ACTN4-202ENST00000390009 ANKRD30AQ9BXX3 1397 aa26.18■■□□□ 1.78
ACTN4-202ENST00000390009 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.18■■□□□ 1.781e-6■■□□□ 13.8
ACTN4-202ENST00000390009 ARHGEF5Q12774 1597 aa26.17■■□□□ 1.78
ACTN4-202ENST00000390009 SAMD9LQ8IVG5 1584 aa26.17■■□□□ 1.78
ACTN4-202ENST00000390009 KDM5BQ9UGL1 1544 aa26.15■■□□□ 1.78
ACTN4-202ENST00000390009 C9orf84Q5VXU9 1444 aa26.14■■□□□ 1.77
ACTN4-202ENST00000390009 MYO5CQ9NQX4 1742 aa26.14■■□□□ 1.77
ACTN4-202ENST00000390009 MIER1Q8N108 512 aa26.13■■□□□ 1.77
ACTN4-202ENST00000390009 MBD5Q9P267 1494 aa26.12■■□□□ 1.77
ACTN4-202ENST00000390009 ARHGAP5Q13017 1502 aa26.1■■□□□ 1.77
ACTN4-202ENST00000390009 HNRNPMP52272 730 aaKnown RBP eCLIP26.09■■□□□ 1.775e-7■■■■□ 24.2
ACTN4-202ENST00000390009 TSPY4P0CV99 314 aa26.08■■□□□ 1.77
ACTN4-202ENST00000390009 TSPY10P0CW01 314 aa26.08■■□□□ 1.77
ACTN4-202ENST00000390009 ANKRD50Q9ULJ7 1429 aa26.07■■□□□ 1.76
ACTN4-202ENST00000390009 CCDC141Q6ZP82 1450 aa26.07■■□□□ 1.76
ACTN4-202ENST00000390009 PZPP20742 1482 aa26.07■■□□□ 1.76
ACTN4-202ENST00000390009 FOXD1Q16676 465 aa26.06■■□□□ 1.76
ACTN4-202ENST00000390009 SLC4A1APQ9BWU0 796 aaKnown RBP26.06■■□□□ 1.76
ACTN4-202ENST00000390009 KCNH8Q96L42 1107 aa26.05■■□□□ 1.76
ACTN4-202ENST00000390009 ANKRD30BQ9BXX2 1392 aa26.04■■□□□ 1.76
ACTN4-202ENST00000390009 SYCP2Q9BX26 1530 aa26.04■■□□□ 1.76
ACTN4-202ENST00000390009 RSPH4AQ5TD94 716 aa26.02■■□□□ 1.76
ACTN4-202ENST00000390009 KIF15Q9NS87 1388 aa25.99■■□□□ 1.75
ACTN4-202ENST00000390009 RPRD2Q5VT52 1461 aaKnown RBP25.98■■□□□ 1.75
ACTN4-202ENST00000390009 PLEKHH2Q8IVE3 1493 aa25.98■■□□□ 1.75
ACTN4-202ENST00000390009 MAST1Q9Y2H9 1570 aa25.97■■□□□ 1.75
ACTN4-202ENST00000390009 PLCH2O75038 1416 aa25.97■■□□□ 1.75
ACTN4-202ENST00000390009 KIAA1107Q9UPP5 1409 aa25.96■■□□□ 1.75
ACTN4-202ENST00000390009 OSCARQ8IYS5 282 aa25.96■■□□□ 1.75
ACTN4-202ENST00000390009 KDM5DQ9BY66 1539 aa25.92■■□□□ 1.74
ACTN4-202ENST00000390009 WDR7Q9Y4E6 1490 aa25.9■■□□□ 1.74
ACTN4-202ENST00000390009 L3MBTL2Q969R5 705 aa25.9■■□□□ 1.74
ACTN4-202ENST00000390009 NUP155O75694 1391 aa25.89■■□□□ 1.74
ACTN4-202ENST00000390009 ARHGEF12Q9NZN5 1544 aa25.89■■□□□ 1.74
ACTN4-202ENST00000390009 TEX14Q8IWB6 1497 aa25.89■■□□□ 1.73
ACTN4-202ENST00000390009 PLXNC1O60486 1568 aa25.88■■□□□ 1.73
ACTN4-202ENST00000390009 PKD2Q13563 968 aa25.88■■□□□ 1.73
ACTN4-202ENST00000390009 EFCAB2Q5VUJ9 269 aa25.88■■□□□ 1.73
ACTN4-202ENST00000390009 HIRIP3Q9BW71 556 aaPredicted RBP25.88■■□□□ 1.73
ACTN4-202ENST00000390009 ABCC1P33527 1531 aa25.87■■□□□ 1.73
ACTN4-202ENST00000390009 CENPBP07199 599 aaPredicted RBP25.87■■□□□ 1.73
ACTN4-202ENST00000390009 ARAP3Q8WWN8 1544 aa25.86■■□□□ 1.73
ACTN4-202ENST00000390009 ABCA9Q8IUA7 1624 aa25.81■■□□□ 1.72
ACTN4-202ENST00000390009 YTHDC1Q96MU7 727 aaKnown RBP25.8■■□□□ 1.72
ACTN4-202ENST00000390009 DDX10Q13206 875 aaKnown RBP25.79■■□□□ 1.72
ACTN4-202ENST00000390009 UNC13BO14795 1591 aa25.79■■□□□ 1.72
ACTN4-202ENST00000390009 FAM135AQ9P2D6 1515 aa25.77■■□□□ 1.72
ACTN4-202ENST00000390009 ASXL2Q76L83 1435 aa25.77■■□□□ 1.72
ACTN4-202ENST00000390009 DUOX2Q9NRD8 1548 aa25.76■■□□□ 1.71
ACTN4-202ENST00000390009 TRAPPC8Q9Y2L5 1435 aa25.76■■□□□ 1.71
ACTN4-202ENST00000390009 NBPF8Q3BBV2 869 aa25.72■■□□□ 1.71
ACTN4-202ENST00000390009 PELP1Q8IZL8 1130 aaKnown RBP25.72■■□□□ 1.71
ACTN4-202ENST00000390009 FANCAO15360 1455 aa25.71■■□□□ 1.71
ACTN4-202ENST00000390009 ERBINQ96RT1 1412 aa25.71■■□□□ 1.71
ACTN4-202ENST00000390009 HSPA5P11021 654 aaKnown RBP25.7■■□□□ 1.7
ACTN4-202ENST00000390009 IQGAP3Q86VI3 1631 aa25.69■■□□□ 1.7
ACTN4-202ENST00000390009 EIF4G2P78344 907 aaKnown RBP eCLIP25.69■■□□□ 1.7
ACTN4-202ENST00000390009 NPM1P06748 294 aaKnown RBP eCLIP25.67■■□□□ 1.7
ACTN4-202ENST00000390009 ZFYVE16Q7Z3T8 1539 aa25.67■■□□□ 1.7
ACTN4-202ENST00000390009 RTEL1-TNFRSF6BF6WH68 1400 aa25.67■■□□□ 1.7
ACTN4-202ENST00000390009 SCAF1Q9H7N4 1312 aaKnown RBP25.66■■□□□ 1.7
ACTN4-202ENST00000390009 MAGI2Q86UL8 1455 aa25.65■■□□□ 1.7
ACTN4-202ENST00000390009 SPAG9O60271 1321 aaKnown RBP25.65■■□□□ 1.7
ACTN4-202ENST00000390009 AFAP1Q8N556 730 aa25.64■■□□□ 1.69
ACTN4-202ENST00000390009 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.63■■□□□ 1.698e-8■□□□□ 10.6
ACTN4-202ENST00000390009 ADGRL1O94910 1474 aa25.62■■□□□ 1.69
ACTN4-202ENST00000390009 INO80Q9ULG1 1556 aaPredicted RBP25.6■■□□□ 1.69
ACTN4-202ENST00000390009 ATP7AQ04656 1500 aa25.58■■□□□ 1.69
ACTN4-202ENST00000390009 SCAPERQ9BY12 1400 aa25.58■■□□□ 1.68
ACTN4-202ENST00000390009 WASHC2AQ641Q2 1341 aa25.57■■□□□ 1.68
ACTN4-202ENST00000390009 UHRF1BP1Q6BDS2 1440 aa25.55■■□□□ 1.68
ACTN4-202ENST00000390009 SPATA31E1Q6ZUB1 1445 aa25.55■■□□□ 1.68
ACTN4-202ENST00000390009 CCDC144AA2RUR9 1427 aa25.54■■□□□ 1.68
ACTN4-202ENST00000390009 PLA2R1Q13018 1463 aa25.53■■□□□ 1.68
ACTN4-202ENST00000390009 ZNF326Q5BKZ1 582 aaKnown RBP25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms