RNA–Protein interactions for RNA: ENST00000389797.7

LRCH1-202, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRCH1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-202ENST00000389797 CARMIL2Q6F5E8 1435 aa21.59■■□□□ 1.05
LRCH1-202ENST00000389797 UACAQ9BZF9 1416 aa21.59■■□□□ 1.05
LRCH1-202ENST00000389797 HFM1A2PYH4 1435 aa21.57■■□□□ 1.04
LRCH1-202ENST00000389797 ABCA8O94911 1581 aa21.55■■□□□ 1.04
LRCH1-202ENST00000389797 RBM19Q9Y4C8 960 aaKnown RBP21.55■■□□□ 1.04
LRCH1-202ENST00000389797 MIA2Q96PC5 1412 aa21.52■■□□□ 1.04
LRCH1-202ENST00000389797 SHROOM2Q13796 1616 aa21.51■■□□□ 1.03
LRCH1-202ENST00000389797 PRG4Q92954 1404 aaPredicted RBP21.49■■□□□ 1.03
LRCH1-202ENST00000389797 ADCY10Q96PN6 1610 aa21.48■■□□□ 1.03
LRCH1-202ENST00000389797 NAIPQ13075 1403 aa21.48■■□□□ 1.03
LRCH1-202ENST00000389797 TROQ12816 1431 aaPredicted RBP21.47■■□□□ 1.03
LRCH1-202ENST00000389797 KIF14Q15058 1648 aa21.46■■□□□ 1.03
LRCH1-202ENST00000389797 HNRNPUQ00839 825 aaKnown RBP eCLIP21.44■■□□□ 1.02
LRCH1-202ENST00000389797 GCC2Q8IWJ2 1684 aa21.43■■□□□ 1.02
LRCH1-202ENST00000389797 ATP10BO94823 1461 aa21.42■■□□□ 1.02
LRCH1-202ENST00000389797 CDK11AQ9UQ88 783 aaPredicted RBP21.41■■□□□ 1.02
LRCH1-202ENST00000389797 ERCC6L2Q5T890 1561 aa21.4■■□□□ 1.02
LRCH1-202ENST00000389797 AKNAQ7Z591 1439 aa21.39■■□□□ 1.01
LRCH1-202ENST00000389797 DNMT1P26358 1616 aaKnown RBP21.38■■□□□ 1.01
LRCH1-202ENST00000389797 KDM6BO15054 1643 aa21.37■■□□□ 1.01
LRCH1-202ENST00000389797 ITSN2Q9NZM3 1697 aa21.37■■□□□ 1.01
LRCH1-202ENST00000389797 PTPRGP23470 1445 aa21.37■■□□□ 1.01
LRCH1-202ENST00000389797 CLASP1Q7Z460 1538 aa21.37■■□□□ 1.01
LRCH1-202ENST00000389797 KDM5BQ9UGL1 1544 aa21.37■■□□□ 1.01
LRCH1-202ENST00000389797 GPATCH8Q9UKJ3 1502 aaKnown RBP21.37■■□□□ 1.01
LRCH1-202ENST00000389797 ZNF644Q9H582 1327 aaPredicted RBP21.36■■□□□ 1.01
LRCH1-202ENST00000389797 HSPA5P11021 654 aaKnown RBP21.35■■□□□ 1.01
LRCH1-202ENST00000389797 DAPK1P53355 1430 aa21.35■■□□□ 1.01
LRCH1-202ENST00000389797 WASHC2AQ641Q2 1341 aa21.35■■□□□ 1.01
LRCH1-202ENST00000389797 ABCC5O15440 1437 aa21.34■■□□□ 1.01
LRCH1-202ENST00000389797 RRP7BPQ9NSQ0 103 aa21.34■■□□□ 1.01
LRCH1-202ENST00000389797 EIF4G2P78344 907 aaKnown RBP eCLIP21.33■■□□□ 1.011e-6■■■□□ 16.6
LRCH1-202ENST00000389797 ABCC10Q5T3U5 1492 aa21.33■■□□□ 1.01
LRCH1-202ENST00000389797 CHIC2Q9UKJ5 165 aa21.33■■□□□ 1
LRCH1-202ENST00000389797 CDC42BPAQ5VT25 1732 aa21.33■■□□□ 1
LRCH1-202ENST00000389797 CAMSAP2Q08AD1 1489 aa21.31■■□□□ 1
LRCH1-202ENST00000389797 ERICH6BQ5W0A0 696 aa21.29■■□□□ 1
LRCH1-202ENST00000389797 DENND4BO75064 1496 aaPredicted RBP21.28■■□□□ 1
LRCH1-202ENST00000389797 IRX6P78412 446 aaPredicted RBP21.27■■□□□ 1
LRCH1-202ENST00000389797 ROCK1Q13464 1354 aa21.27■■□□□ 1
LRCH1-202ENST00000389797 CROCC2H7BZ55 1655 aa21.26■□□□□ 0.99
LRCH1-202ENST00000389797 PLEKHD1A6NEE1 506 aa21.25■□□□□ 0.99
LRCH1-202ENST00000389797 CNTLNQ9NXG0 1405 aa21.25■□□□□ 0.99
LRCH1-202ENST00000389797 FANCIQ9NVI1 1328 aa21.24■□□□□ 0.99
LRCH1-202ENST00000389797 CFDP1Q9UEE9 299 aaPredicted RBP21.24■□□□□ 0.99
LRCH1-202ENST00000389797 MPHOSPH9Q99550 1183 aa21.23■□□□□ 0.99
LRCH1-202ENST00000389797 ABCC2Q92887 1545 aa21.23■□□□□ 0.99
LRCH1-202ENST00000389797 MSH5O43196 834 aa21.21■□□□□ 0.99
LRCH1-202ENST00000389797 ADGBQ8N7X0 1667 aa21.21■□□□□ 0.99
LRCH1-202ENST00000389797 L3MBTL2Q969R5 705 aa21.21■□□□□ 0.99
LRCH1-202ENST00000389797 PPP4R2Q9NY27 417 aa21.21■□□□□ 0.99
LRCH1-202ENST00000389797 DAXXQ9UER7 740 aaPredicted RBP21.19■□□□□ 0.98
LRCH1-202ENST00000389797 PRKRIP1Q9H875 184 aaPredicted RBP21.18■□□□□ 0.98
LRCH1-202ENST00000389797 CDC42BPBQ9Y5S2 1711 aa21.18■□□□□ 0.98
LRCH1-202ENST00000389797 CCDC7Q96M83 1385 aa21.17■□□□□ 0.98
LRCH1-202ENST00000389797 CCDC184Q52MB2 194 aa21.17■□□□□ 0.98
LRCH1-202ENST00000389797 ADGRL2O95490 1459 aa21.17■□□□□ 0.98
LRCH1-202ENST00000389797 NCOA1Q15788 1441 aa21.16■□□□□ 0.98
LRCH1-202ENST00000389797 EIF5BO60841 1220 aaKnown RBP21.16■□□□□ 0.98
LRCH1-202ENST00000389797 PREX2Q70Z35 1606 aa21.15■□□□□ 0.98
LRCH1-202ENST00000389797 FAM9BQ8IZU0 186 aa21.15■□□□□ 0.98
LRCH1-202ENST00000389797 MRS2Q9HD23 443 aa21.15■□□□□ 0.98
LRCH1-202ENST00000389797 TTC37Q6PGP7 1564 aa21.14■□□□□ 0.97
LRCH1-202ENST00000389797 C11orf95C9JLR9 678 aaPredicted RBP21.14■□□□□ 0.97
LRCH1-202ENST00000389797 ZNF777Q9ULD5 760 aaPredicted RBP21.14■□□□□ 0.97
LRCH1-202ENST00000389797 UHRF1BP1LA0JNW5 1464 aa21.12■□□□□ 0.97
LRCH1-202ENST00000389797 ZBED9Q6R2W3 1325 aa21.12■□□□□ 0.97
LRCH1-202ENST00000389797 ZCCHC11Q5TAX3 1644 aaKnown RBP21.12■□□□□ 0.97
LRCH1-202ENST00000389797 FOXD1Q16676 465 aa21.12■□□□□ 0.97
LRCH1-202ENST00000389797 SAMD9LQ8IVG5 1584 aa21.11■□□□□ 0.97
LRCH1-202ENST00000389797 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.11■□□□□ 0.979e-7■■■□□ 17.5
LRCH1-202ENST00000389797 SHANK2Q9UPX8 1470 aa21.1■□□□□ 0.97
LRCH1-202ENST00000389797 MBD5Q9P267 1494 aa21.09■□□□□ 0.97
LRCH1-202ENST00000389797 ARHGEF5Q12774 1597 aa21.09■□□□□ 0.97
LRCH1-202ENST00000389797 ANKRD30BQ9BXX2 1392 aa21.08■□□□□ 0.97
LRCH1-202ENST00000389797 RPRD2Q5VT52 1461 aaKnown RBP21.08■□□□□ 0.96
LRCH1-202ENST00000389797 NBPF8Q3BBV2 869 aa21.07■□□□□ 0.96
LRCH1-202ENST00000389797 C9orf84Q5VXU9 1444 aa21.05■□□□□ 0.96
LRCH1-202ENST00000389797 PZPP20742 1482 aa21.04■□□□□ 0.96
LRCH1-202ENST00000389797 KIF7Q2M1P5 1343 aa21.04■□□□□ 0.96
LRCH1-202ENST00000389797 MYO5CQ9NQX4 1742 aa21.03■□□□□ 0.96
LRCH1-202ENST00000389797 B4GALNT3Q6L9W6 998 aa21.03■□□□□ 0.96
LRCH1-202ENST00000389797 ANKRD30AQ9BXX3 1397 aa21.02■□□□□ 0.96
LRCH1-202ENST00000389797 SLC4A1APQ9BWU0 796 aaKnown RBP21.02■□□□□ 0.96
LRCH1-202ENST00000389797 TEX14Q8IWB6 1497 aa21.01■□□□□ 0.95
LRCH1-202ENST00000389797 SPATA31E1Q6ZUB1 1445 aa21.01■□□□□ 0.95
LRCH1-202ENST00000389797 HNRNPMP52272 730 aaKnown RBP eCLIP20.99■□□□□ 0.955e-7■■■□□ 17.2
LRCH1-202ENST00000389797 SYCP2Q9BX26 1530 aa20.98■□□□□ 0.95
LRCH1-202ENST00000389797 CCDC141Q6ZP82 1450 aa20.98■□□□□ 0.95
LRCH1-202ENST00000389797 ANKRD50Q9ULJ7 1429 aa20.98■□□□□ 0.95
LRCH1-202ENST00000389797 ARHGAP5Q13017 1502 aa20.98■□□□□ 0.95
LRCH1-202ENST00000389797 POLR1AO95602 1720 aaPredicted RBP20.95■□□□□ 0.94
LRCH1-202ENST00000389797 MYT1LQ9UL68 1186 aa20.94■□□□□ 0.94
LRCH1-202ENST00000389797 MAST1Q9Y2H9 1570 aa20.93■□□□□ 0.94
LRCH1-202ENST00000389797 ARHGEF12Q9NZN5 1544 aa20.92■□□□□ 0.94
LRCH1-202ENST00000389797 KDM5DQ9BY66 1539 aa20.91■□□□□ 0.94
LRCH1-202ENST00000389797 PLCH2O75038 1416 aa20.91■□□□□ 0.94
LRCH1-202ENST00000389797 SMG6Q86US8 1419 aaKnown RBP20.91■□□□□ 0.94
LRCH1-202ENST00000389797 KIF15Q9NS87 1388 aa20.91■□□□□ 0.94
LRCH1-202ENST00000389797 TSPY4P0CV99 314 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms