RNA–Protein interactions for RNA: ENST00000389531.7

SDK1-201, Transcript of sidekick cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SDK1, Length 7,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-201ENST00000389531 NUTM2DQ5VT03 806 aaPredicted RBP26.52■■□□□ 1.84
SDK1-201ENST00000389531 PNNQ9H307 717 aaKnown RBP26.51■■□□□ 1.83
SDK1-201ENST00000389531 MCCP23508 829 aa26.49■■□□□ 1.83
SDK1-201ENST00000389531 NRDCO43847 1150 aa26.48■■□□□ 1.83
SDK1-201ENST00000389531 VPS53Q5VIR6 699 aa26.46■■□□□ 1.83
SDK1-201ENST00000389531 KIAA2012Q0VF49 1180 aa26.46■■□□□ 1.83
SDK1-201ENST00000389531 NUTM2FA1L443 756 aa26.46■■□□□ 1.83
SDK1-201ENST00000389531 WWC1Q8IX03 1113 aa26.45■■□□□ 1.83
SDK1-201ENST00000389531 FOXD1Q16676 465 aa26.45■■□□□ 1.82
SDK1-201ENST00000389531 GZF1Q9H116 711 aaPredicted RBP26.45■■□□□ 1.82
SDK1-201ENST00000389531 TAF7LQ5H9L4 462 aa26.45■■□□□ 1.82
SDK1-201ENST00000389531 NOL8Q76FK4 1167 aaKnown RBP26.44■■□□□ 1.82
SDK1-201ENST00000389531 NOP58Q9Y2X3 529 aaKnown RBP26.44■■□□□ 1.82
SDK1-201ENST00000389531 CHAF1AQ13111 956 aaPredicted RBP26.44■■□□□ 1.82
SDK1-201ENST00000389531 GORABQ5T7V8 394 aa26.44■■□□□ 1.82
SDK1-201ENST00000389531 TMF1P82094 1093 aa26.44■■□□□ 1.82
SDK1-201ENST00000389531 MSNP26038 577 aaKnown RBP26.42■■□□□ 1.82
SDK1-201ENST00000389531 KIAA1211Q6ZU35 1233 aa26.42■■□□□ 1.82
SDK1-201ENST00000389531 LTV1Q96GA3 475 aaPredicted RBP26.41■■□□□ 1.82
SDK1-201ENST00000389531 KANK1Q14678 1352 aa26.4■■□□□ 1.82
SDK1-201ENST00000389531 ITPRIPQ8IWB1 547 aa26.38■■□□□ 1.81
SDK1-201ENST00000389531 FOXD4L1Q9NU39 408 aa26.38■■□□□ 1.81
SDK1-201ENST00000389531 DCAF1Q9Y4B6 1507 aa26.37■■□□□ 1.81
SDK1-201ENST00000389531 CHMP4BQ9H444 224 aaKnown RBP26.36■■□□□ 1.81
SDK1-201ENST00000389531 MSH5O43196 834 aa26.36■■□□□ 1.81
SDK1-201ENST00000389531 TRIM6-TRIM34B2RNG4 842 aa26.34■■□□□ 1.81
SDK1-201ENST00000389531 PPP4R2Q9NY27 417 aa26.34■■□□□ 1.81
SDK1-201ENST00000389531 HDGFP51858 240 aaKnown RBP26.34■■□□□ 1.81
SDK1-201ENST00000389531 MS4A1P11836 297 aa26.33■■□□□ 1.81
SDK1-201ENST00000389531 SLC4A10Q6U841 1118 aa26.32■■□□□ 1.8
SDK1-201ENST00000389531 RASSF8Q8NHQ8 419 aa26.32■■□□□ 1.8
SDK1-201ENST00000389531 FRAT2O75474 233 aaPredicted RBP26.32■■□□□ 1.8
SDK1-201ENST00000389531 HDGFL2Q7Z4V5 671 aaPredicted RBP26.31■■□□□ 1.8
SDK1-201ENST00000389531 A0A0U1RQG5 324 aaPredicted RBP26.3■■□□□ 1.8
SDK1-201ENST00000389531 FOXD4L5Q5VV16 416 aaPredicted RBP26.3■■□□□ 1.8
SDK1-201ENST00000389531 FOXD4L4Q8WXT5 416 aaPredicted RBP26.3■■□□□ 1.8
SDK1-201ENST00000389531 TOMM22Q9NS69 142 aa26.3■■□□□ 1.8
SDK1-201ENST00000389531 CEP162Q5TB80 1403 aa26.3■■□□□ 1.8
SDK1-201ENST00000389531 CCNB3Q8WWL7 1395 aa26.28■■□□□ 1.8
SDK1-201ENST00000389531 RAD21O60216 631 aa26.28■■□□□ 1.8
SDK1-201ENST00000389531 U2AF1L5P0DN76 240 aaPredicted RBP26.28■■□□□ 1.8
SDK1-201ENST00000389531 U2AF1Q01081 240 aaKnown RBP eCLIP26.28■■□□□ 1.8
SDK1-201ENST00000389531 GOLGA3Q08378 1498 aa26.27■■□□□ 1.8
SDK1-201ENST00000389531 SLKQ9H2G2 1235 aaPredicted RBP26.24■■□□□ 1.79
SDK1-201ENST00000389531 GTF2E1P29083 439 aaPredicted RBP26.23■■□□□ 1.79
SDK1-201ENST00000389531 CCDC146Q8IYE0 955 aa26.23■■□□□ 1.79
SDK1-201ENST00000389531 KLHL34Q8N239 644 aa26.23■■□□□ 1.79
SDK1-201ENST00000389531 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.21■■□□□ 1.795e-7■■■■□ 19.7
SDK1-201ENST00000389531 MFAP1P55081 439 aaKnown RBP26.2■■□□□ 1.78
SDK1-201ENST00000389531 MARCH6O60337 910 aa26.19■■□□□ 1.78
SDK1-201ENST00000389531 L1TD1Q5T7N2 865 aaKnown RBP26.19■■□□□ 1.78
SDK1-201ENST00000389531 NGEFQ8N5V2 710 aa26.19■■□□□ 1.78
SDK1-201ENST00000389531 PES1O00541 588 aaKnown RBP26.17■■□□□ 1.78
SDK1-201ENST00000389531 KRI1Q8N9T8 703 aaKnown RBP26.15■■□□□ 1.78
SDK1-201ENST00000389531 FBXW7Q969H0 707 aa26.15■■□□□ 1.78
SDK1-201ENST00000389531 NGDNQ8NEJ9 315 aaKnown RBP26.13■■□□□ 1.77
SDK1-201ENST00000389531 MYO15BQ96JP2 1530 aa26.13■■□□□ 1.77
SDK1-201ENST00000389531 FOXD4L6Q3SYB3 417 aaPredicted RBP26.12■■□□□ 1.77
SDK1-201ENST00000389531 FOXD4L3Q6VB84 417 aaPredicted RBP26.12■■□□□ 1.77
SDK1-201ENST00000389531 BAZ1BQ9UIG0 1483 aaKnown RBP26.11■■□□□ 1.77
SDK1-201ENST00000389531 CLUAP1Q96AJ1 413 aa26.11■■□□□ 1.77
SDK1-201ENST00000389531 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.1■■□□□ 1.77
SDK1-201ENST00000389531 GPATCH3Q96I76 525 aa26.1■■□□□ 1.77
SDK1-201ENST00000389531 ROCK2O75116 1388 aaKnown RBP26.1■■□□□ 1.77
SDK1-201ENST00000389531 SPAG9O60271 1321 aaKnown RBP26.1■■□□□ 1.77
SDK1-201ENST00000389531 SAMD1Q6SPF0 538 aaPredicted RBP26.09■■□□□ 1.77
SDK1-201ENST00000389531 STK31Q9BXU1 1019 aa26.09■■□□□ 1.77
SDK1-201ENST00000389531 AMPHP49418 695 aa26.08■■□□□ 1.77
SDK1-201ENST00000389531 HSPA5P11021 654 aaKnown RBP26.08■■□□□ 1.77
SDK1-201ENST00000389531 EVA1CP58658 441 aa26.08■■□□□ 1.77
SDK1-201ENST00000389531 IPO8O15397 1037 aaKnown RBP26.08■■□□□ 1.76
SDK1-201ENST00000389531 SMC4Q9NTJ3 1288 aa26.07■■□□□ 1.76
SDK1-201ENST00000389531 PKD2Q13563 968 aa26.07■■□□□ 1.76
SDK1-201ENST00000389531 MEX3CQ5U5Q3 659 aaKnown RBP26.07■■□□□ 1.76
SDK1-201ENST00000389531 PHF23Q9BUL5 403 aaPredicted RBP26.07■■□□□ 1.76
SDK1-201ENST00000389531 KIF27Q86VH2 1401 aa26.05■■□□□ 1.76
SDK1-201ENST00000389531 DEKP35659 375 aaKnown RBP26.05■■□□□ 1.76
SDK1-201ENST00000389531 TPM4P67936 248 aa26.05■■□□□ 1.76
SDK1-201ENST00000389531 KTN1Q86UP2 1357 aaKnown RBP26.03■■□□□ 1.76
SDK1-201ENST00000389531 SYTL4Q96C24 671 aaPredicted RBP26.03■■□□□ 1.76
SDK1-201ENST00000389531 CNKSR2Q8WXI2 1034 aa26.01■■□□□ 1.75
SDK1-201ENST00000389531 CEP89Q96ST8 783 aa26.01■■□□□ 1.75
SDK1-201ENST00000389531 RRP7AQ9Y3A4 280 aaKnown RBP26■■□□□ 1.75
SDK1-201ENST00000389531 PATL2C9JE40 543 aaKnown RBP26■■□□□ 1.75
SDK1-201ENST00000389531 NECTIN2Q92692 538 aa26■■□□□ 1.75
SDK1-201ENST00000389531 WRNQ14191 1432 aaPredicted RBP eCLIP25.99■■□□□ 1.751e-7■■■■■ 66.8
SDK1-201ENST00000389531 AEBP2Q6ZN18 517 aaPredicted RBP25.98■■□□□ 1.75
SDK1-201ENST00000389531 GBP4Q96PP9 640 aa25.98■■□□□ 1.75
SDK1-201ENST00000389531 RILPL2Q969X0 211 aa25.97■■□□□ 1.75
SDK1-201ENST00000389531 RB1CC1Q8TDY2 1594 aa25.97■■□□□ 1.75
SDK1-201ENST00000389531 EID1Q9Y6B2 187 aa25.96■■□□□ 1.75
SDK1-201ENST00000389531 ELL2O00472 640 aaPredicted RBP25.95■■□□□ 1.75
SDK1-201ENST00000389531 TCEAL9Q9UHQ7 104 aa25.95■■□□□ 1.75
SDK1-201ENST00000389531 TPD52L1Q16890 204 aaPredicted RBP25.95■■□□□ 1.74
SDK1-201ENST00000389531 TRIM34Q9BYJ4 488 aa25.94■■□□□ 1.74
SDK1-201ENST00000389531 HTATSF1O43719 755 aaKnown RBP25.94■■□□□ 1.74
SDK1-201ENST00000389531 RCAN3Q9UKA8 241 aa25.94■■□□□ 1.74
SDK1-201ENST00000389531 RWDD1Q9H446 243 aaPredicted RBP25.93■■□□□ 1.74
SDK1-201ENST00000389531 CTDP1Q9Y5B0 961 aaPredicted RBP25.93■■□□□ 1.74
SDK1-201ENST00000389531 SF3A1Q15459 793 aaKnown RBP25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms