RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 NGDNQ8NEJ9 315 aaKnown RBP19.08■□□□□ 0.65
LRRK1-201ENST00000388948 PTMAP06454 111 aaKnown RBP19.07■□□□□ 0.64
LRRK1-201ENST00000388948 RGS3P49796 1198 aa19.07■□□□□ 0.64
LRRK1-201ENST00000388948 TRIM44Q96DX7 344 aaPredicted RBP19.07■□□□□ 0.64
LRRK1-201ENST00000388948 TDRD9Q8NDG6 1382 aaKnown RBP19.07■□□□□ 0.64
LRRK1-201ENST00000388948 SOGA1O94964 1423 aa19.07■□□□□ 0.64
LRRK1-201ENST00000388948 WASHC2CQ9Y4E1 1318 aa19.06■□□□□ 0.64
LRRK1-201ENST00000388948 TNIKQ9UKE5 1360 aa19.06■□□□□ 0.64
LRRK1-201ENST00000388948 PKD2Q13563 968 aa19.05■□□□□ 0.64
LRRK1-201ENST00000388948 NUTM2DQ5VT03 806 aaPredicted RBP19.05■□□□□ 0.64
LRRK1-201ENST00000388948 NUTM2FA1L443 756 aa19.04■□□□□ 0.64
LRRK1-201ENST00000388948 CHMP3Q9Y3E7 222 aa19.02■□□□□ 0.64
LRRK1-201ENST00000388948 PLCB2Q00722 1185 aa19.02■□□□□ 0.64
LRRK1-201ENST00000388948 ANP32EQ9BTT0 268 aa19.02■□□□□ 0.63
LRRK1-201ENST00000388948 GTF2E1P29083 439 aaPredicted RBP19.01■□□□□ 0.63
LRRK1-201ENST00000388948 TAF7LQ5H9L4 462 aa19.01■□□□□ 0.63
LRRK1-201ENST00000388948 APBB1O00213 710 aa19■□□□□ 0.63
LRRK1-201ENST00000388948 MEX3CQ5U5Q3 659 aaKnown RBP19■□□□□ 0.63
LRRK1-201ENST00000388948 MSH5O43196 834 aa18.98■□□□□ 0.63
LRRK1-201ENST00000388948 HSP90AB1P08238 724 aaKnown RBP18.98■□□□□ 0.63
LRRK1-201ENST00000388948 GORABQ5T7V8 394 aa18.98■□□□□ 0.63
LRRK1-201ENST00000388948 SUPT16HQ9Y5B9 1047 aaKnown RBP18.98■□□□□ 0.63
LRRK1-201ENST00000388948 LTV1Q96GA3 475 aaPredicted RBP18.98■□□□□ 0.63
LRRK1-201ENST00000388948 FOXD1Q16676 465 aa18.98■□□□□ 0.63
LRRK1-201ENST00000388948 SPAG9O60271 1321 aaKnown RBP18.98■□□□□ 0.63
LRRK1-201ENST00000388948 GNL2Q13823 731 aaKnown RBP18.98■□□□□ 0.63
LRRK1-201ENST00000388948 U2AF1L5P0DN76 240 aaPredicted RBP18.98■□□□□ 0.63
LRRK1-201ENST00000388948 U2AF1Q01081 240 aaKnown RBP eCLIP18.98■□□□□ 0.63
LRRK1-201ENST00000388948 GOLGA6L4A6NEF3 574 aa18.97■□□□□ 0.63
LRRK1-201ENST00000388948 EVA1CP58658 441 aa18.97■□□□□ 0.63
LRRK1-201ENST00000388948 AMPHP49418 695 aa18.96■□□□□ 0.63
LRRK1-201ENST00000388948 HNRNPMP52272 730 aaKnown RBP eCLIP18.96■□□□□ 0.63
LRRK1-201ENST00000388948 NUP155O75694 1391 aa18.96■□□□□ 0.63
LRRK1-201ENST00000388948 ARHGAP35Q9NRY4 1499 aa18.96■□□□□ 0.63
LRRK1-201ENST00000388948 MCCP23508 829 aa18.95■□□□□ 0.62
LRRK1-201ENST00000388948 DNTTIP2Q5QJE6 756 aaKnown RBP18.94■□□□□ 0.62
LRRK1-201ENST00000388948 CALD1Q05682 793 aaKnown RBP18.94■□□□□ 0.62
LRRK1-201ENST00000388948 PHF23Q9BUL5 403 aaPredicted RBP18.94■□□□□ 0.62
LRRK1-201ENST00000388948 ROCK2O75116 1388 aaKnown RBP18.93■□□□□ 0.62
LRRK1-201ENST00000388948 SMARCA2P51531 1590 aa18.93■□□□□ 0.62
LRRK1-201ENST00000388948 TERF2IPQ9NYB0 399 aa18.92■□□□□ 0.62
LRRK1-201ENST00000388948 GOLGA6L6A8MZA4 724 aa18.92■□□□□ 0.62
LRRK1-201ENST00000388948 OSCARQ8IYS5 282 aa18.92■□□□□ 0.62
LRRK1-201ENST00000388948 CHMP4AQ9BY43 222 aa18.92■□□□□ 0.62
LRRK1-201ENST00000388948 FRAT2O75474 233 aaPredicted RBP18.91■□□□□ 0.62
LRRK1-201ENST00000388948 KIAA1211Q6ZU35 1233 aa18.91■□□□□ 0.62
LRRK1-201ENST00000388948 STK31Q9BXU1 1019 aa18.91■□□□□ 0.62
LRRK1-201ENST00000388948 ANKRD30AQ9BXX3 1397 aa18.91■□□□□ 0.62
LRRK1-201ENST00000388948 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.9■□□□□ 0.62
LRRK1-201ENST00000388948 IPO8O15397 1037 aaKnown RBP18.89■□□□□ 0.62
LRRK1-201ENST00000388948 JPH4Q96JJ6 628 aa18.89■□□□□ 0.61
LRRK1-201ENST00000388948 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.88■□□□□ 0.61
LRRK1-201ENST00000388948 EIF3AQ14152 1382 aaKnown RBP18.87■□□□□ 0.61
LRRK1-201ENST00000388948 NRDCO43847 1150 aa18.85■□□□□ 0.61
LRRK1-201ENST00000388948 KTN1Q86UP2 1357 aaKnown RBP18.85■□□□□ 0.61
LRRK1-201ENST00000388948 FMN1Q68DA7 1419 aa18.84■□□□□ 0.61
LRRK1-201ENST00000388948 GLIPR1L2Q4G1C9 344 aa18.83■□□□□ 0.61
LRRK1-201ENST00000388948 KLHL34Q8N239 644 aa18.82■□□□□ 0.6
LRRK1-201ENST00000388948 MPHOSPH9Q99550 1183 aa18.8■□□□□ 0.6
LRRK1-201ENST00000388948 ITPRIPQ8IWB1 547 aa18.8■□□□□ 0.6
LRRK1-201ENST00000388948 HSCBQ8IWL3 235 aa18.8■□□□□ 0.6
LRRK1-201ENST00000388948 SLC4A10Q6U841 1118 aa18.8■□□□□ 0.6
LRRK1-201ENST00000388948 TRAK1Q9UPV9 953 aa18.8■□□□□ 0.6
LRRK1-201ENST00000388948 HDAC5Q9UQL6 1122 aa18.8■□□□□ 0.6
LRRK1-201ENST00000388948 RSPH4AQ5TD94 716 aa18.79■□□□□ 0.6
LRRK1-201ENST00000388948 GPATCH3Q96I76 525 aa18.79■□□□□ 0.6
LRRK1-201ENST00000388948 SETD5Q9C0A6 1442 aa18.78■□□□□ 0.6
LRRK1-201ENST00000388948 CFAP44Q96MT7 982 aa18.78■□□□□ 0.6
LRRK1-201ENST00000388948 HSPA5P11021 654 aaKnown RBP18.78■□□□□ 0.6
LRRK1-201ENST00000388948 SYTL4Q96C24 671 aaPredicted RBP18.78■□□□□ 0.6
LRRK1-201ENST00000388948 FAM69CQ0P6D2 419 aa18.77■□□□□ 0.6
LRRK1-201ENST00000388948 DCAF8L1A6NGE4 600 aa18.77■□□□□ 0.6
LRRK1-201ENST00000388948 B4GALNT3Q6L9W6 998 aa18.76■□□□□ 0.59
LRRK1-201ENST00000388948 C1orf141Q5JVX7 400 aa18.76■□□□□ 0.59
LRRK1-201ENST00000388948 CCDC88BA6NC98 1476 aa18.76■□□□□ 0.59
LRRK1-201ENST00000388948 AMER1Q5JTC6 1135 aaPredicted RBP18.75■□□□□ 0.59
LRRK1-201ENST00000388948 PRM3Q9NNZ6 103 aa18.74■□□□□ 0.59
LRRK1-201ENST00000388948 TOMM22Q9NS69 142 aa18.74■□□□□ 0.59
LRRK1-201ENST00000388948 ABCC8Q09428 1581 aa18.74■□□□□ 0.59
LRRK1-201ENST00000388948 VPS53Q5VIR6 699 aa18.74■□□□□ 0.59
LRRK1-201ENST00000388948 PPP4R2Q9NY27 417 aa18.73■□□□□ 0.59
LRRK1-201ENST00000388948 CCDC18Q5T9S5 1454 aa18.72■□□□□ 0.59
LRRK1-201ENST00000388948 PSME1Q06323 249 aa18.72■□□□□ 0.59
LRRK1-201ENST00000388948 CADPSQ9ULU8 1353 aa18.72■□□□□ 0.59
LRRK1-201ENST00000388948 SPRYD3Q8NCJ5 442 aa18.72■□□□□ 0.59
LRRK1-201ENST00000388948 TRIM6-TRIM34B2RNG4 842 aa18.71■□□□□ 0.59
LRRK1-201ENST00000388948 LMOD3Q0VAK6 560 aa18.71■□□□□ 0.59
LRRK1-201ENST00000388948 DRC7Q8IY82 874 aa18.7■□□□□ 0.58
LRRK1-201ENST00000388948 SMC4Q9NTJ3 1288 aa18.7■□□□□ 0.58
LRRK1-201ENST00000388948 MYO15BQ96JP2 1530 aa18.7■□□□□ 0.58
LRRK1-201ENST00000388948 KANK4Q5T7N3 995 aaPredicted RBP18.7■□□□□ 0.58
LRRK1-201ENST00000388948 KIAA2012Q0VF49 1180 aa18.69■□□□□ 0.58
LRRK1-201ENST00000388948 HSP90B1P14625 803 aaKnown RBP18.69■□□□□ 0.58
LRRK1-201ENST00000388948 PTPRGP23470 1445 aa18.69■□□□□ 0.58
LRRK1-201ENST00000388948 ATF3P18847 181 aa18.69■□□□□ 0.58
LRRK1-201ENST00000388948 RASSF8Q8NHQ8 419 aa18.68■□□□□ 0.58
LRRK1-201ENST00000388948 HMMRO75330 724 aa18.68■□□□□ 0.58
LRRK1-201ENST00000388948 COG3Q96JB2 828 aa18.68■□□□□ 0.58
LRRK1-201ENST00000388948 CHAF1AQ13111 956 aaPredicted RBP18.68■□□□□ 0.58
LRRK1-201ENST00000388948 NGEFQ8N5V2 710 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms